RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 P4HA2O15460 535 aa4.64□□□□□ -1.67
PFDN4-202ENST00000441080 CSPG5O95196 566 aa4.64□□□□□ -1.67
PFDN4-202ENST00000441080 GCNT3O95395 438 aa4.64□□□□□ -1.67
PFDN4-202ENST00000441080 ABCB1P08183 1280 aaPredicted RBP4.64□□□□□ -1.67
PFDN4-202ENST00000441080 PSMC4P43686 418 aa4.64□□□□□ -1.67
PFDN4-202ENST00000441080 KCTD2Q14681 263 aa4.64□□□□□ -1.67
PFDN4-202ENST00000441080 DUOXA1Q1HG43 343 aa4.64□□□□□ -1.67
PFDN4-202ENST00000441080 KLHL22Q53GT1 634 aa4.64□□□□□ -1.67
PFDN4-202ENST00000441080 KLC3Q6P597 504 aa4.64□□□□□ -1.67
PFDN4-202ENST00000441080 NFE4Q86UQ8 179 aa4.64□□□□□ -1.67
PFDN4-202ENST00000441080 SLC24A4Q8NFF2 622 aa4.64□□□□□ -1.67
PFDN4-202ENST00000441080 PTERQ96BW5 349 aa4.64□□□□□ -1.67
PFDN4-202ENST00000441080 MTERF3Q96E29 417 aa4.64□□□□□ -1.67
PFDN4-202ENST00000441080 PRMT6Q96LA8 375 aaPredicted RBP4.64□□□□□ -1.67
PFDN4-202ENST00000441080 DGAT2Q96PD7 388 aa4.64□□□□□ -1.67
PFDN4-202ENST00000441080 NEK1Q96PY6 1258 aa4.64□□□□□ -1.67
PFDN4-202ENST00000441080 OR6C1Q96RD1 312 aa4.64□□□□□ -1.67
PFDN4-202ENST00000441080 EPYCQ99645 322 aa4.64□□□□□ -1.67
PFDN4-202ENST00000441080 UPF2Q9HAU5 1272 aaKnown RBP4.64□□□□□ -1.67
PFDN4-202ENST00000441080 SLC35C2Q9NQQ7 365 aa4.64□□□□□ -1.67
PFDN4-202ENST00000441080 MBNL1Q9NR56 388 aaKnown RBP4.64□□□□□ -1.67
PFDN4-202ENST00000441080 NKIRAS2Q9NYR9 191 aa4.64□□□□□ -1.67
PFDN4-202ENST00000441080 ASTN2O75129 1339 aaPredicted RBP4.64□□□□□ -1.67
PFDN4-202ENST00000441080 DOCK7Q96N67 2140 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 PRSS51A0A1B0GVH4 220 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 SYNDIG1LA6NDD5 238 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 IFITM10A6NMD0 228 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 BMPR1BO00238 502 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 CTSVO60911 334 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 BAG4O95429 457 aaKnown RBP4.63□□□□□ -1.67
PFDN4-202ENST00000441080 LDLRP01130 860 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 ADRB2P07550 413 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 IL11P20809 199 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 MARK3P27448 753 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 KRT20P35900 424 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 MBTD1Q05BQ5 628 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 TMEM211Q6ICI0 200 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 NAA16Q6N069 864 aaPredicted RBP4.63□□□□□ -1.67
PFDN4-202ENST00000441080 TEX38Q6PEX7 206 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 ADIPOR2Q86V24 386 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 LMNTD1Q8N9Z9 388 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 POMGNT2Q8NAT1 580 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 TAS1R2Q8TE23 839 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 ZFAND2BQ8WV99 257 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 C16orf70Q9BSU1 422 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 TCF7L2Q9NQB0 619 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 ZFP57Q9NU63 452 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 SLC38A7Q9NVC3 462 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 TAB2Q9NYJ8 693 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 CLIC5Q9NZA1 410 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 NPAP1Q9NZP6 1156 aa4.63□□□□□ -1.67
PFDN4-202ENST00000441080 TEX13DA0A0J9YY54 714 aaPredicted RBP4.62□□□□□ -1.67
PFDN4-202ENST00000441080 A0A1W2PPI3 338 aa4.62□□□□□ -1.67
PFDN4-202ENST00000441080 IPO8O15397 1037 aaKnown RBP4.62□□□□□ -1.67
PFDN4-202ENST00000441080 FGF17O60258 216 aa4.62□□□□□ -1.67
PFDN4-202ENST00000441080 H1F0P07305 194 aaKnown RBP4.62□□□□□ -1.67
PFDN4-202ENST00000441080 CKMT2P17540 419 aa4.62□□□□□ -1.67
PFDN4-202ENST00000441080 GABRA5P31644 462 aa4.62□□□□□ -1.67
PFDN4-202ENST00000441080 CDK3Q00526 305 aa4.62□□□□□ -1.67
PFDN4-202ENST00000441080 PRKAA1Q13131 559 aa4.62□□□□□ -1.67
PFDN4-202ENST00000441080 KIR2DS3Q14952 304 aa4.62□□□□□ -1.67
PFDN4-202ENST00000441080 NR1D2Q14995 579 aa4.62□□□□□ -1.67
PFDN4-202ENST00000441080 TMEM266Q2M3C6 531 aa4.62□□□□□ -1.67
PFDN4-202ENST00000441080 FIGLAQ6QHK4 219 aa4.62□□□□□ -1.67
PFDN4-202ENST00000441080 SMIM29Q86T20 159 aa4.62□□□□□ -1.67
PFDN4-202ENST00000441080 OR8H2Q8N162 312 aa4.62□□□□□ -1.67
PFDN4-202ENST00000441080 CIARTQ8N365 385 aaPredicted RBP4.62□□□□□ -1.67
PFDN4-202ENST00000441080 LSMEM1Q8N8F7 131 aa4.62□□□□□ -1.67
PFDN4-202ENST00000441080 DAZLQ92904 295 aaKnown RBP4.62□□□□□ -1.67
PFDN4-202ENST00000441080 SCRN2Q96FV2 425 aa4.62□□□□□ -1.67
PFDN4-202ENST00000441080 INPP4AQ96PE3 977 aaPredicted RBP4.62□□□□□ -1.67
PFDN4-202ENST00000441080 CCDC106Q9BWC9 280 aa4.62□□□□□ -1.67
PFDN4-202ENST00000441080 APOBEC3GQ9HC16 384 aaKnown RBP4.62□□□□□ -1.67
PFDN4-202ENST00000441080 RHCGQ9UBD6 479 aa4.62□□□□□ -1.67
PFDN4-202ENST00000441080 TRPV2Q9Y5S1 764 aa4.62□□□□□ -1.67
PFDN4-202ENST00000441080 SPIN1Q9Y657 262 aaPredicted RBP4.62□□□□□ -1.67
PFDN4-202ENST00000441080 ZNF541Q9H0D2 1346 aa4.62□□□□□ -1.67
PFDN4-202ENST00000441080 MED19A0JLT2 244 aaPredicted RBP4.61□□□□□ -1.67
PFDN4-202ENST00000441080 ELOVL7A1L3X0 281 aa4.61□□□□□ -1.67
PFDN4-202ENST00000441080 FAM172BPA6NC97 362 aa4.61□□□□□ -1.67
PFDN4-202ENST00000441080 SYNCRIPO60506 623 aaKnown RBP4.61□□□□□ -1.67
PFDN4-202ENST00000441080 LMX1BO60663 402 aa4.61□□□□□ -1.67
PFDN4-202ENST00000441080 ZNF432O94892 652 aa4.61□□□□□ -1.67
PFDN4-202ENST00000441080 HSP90AA1P07900 732 aaKnown RBP4.61□□□□□ -1.67
PFDN4-202ENST00000441080 DNASE1P24855 282 aa4.61□□□□□ -1.67
PFDN4-202ENST00000441080 CDH13P55290 713 aa4.61□□□□□ -1.67
PFDN4-202ENST00000441080 UBXN2AP68543 259 aa4.61□□□□□ -1.67
PFDN4-202ENST00000441080 MFAP5Q13361 173 aa4.61□□□□□ -1.67
PFDN4-202ENST00000441080 RBBP5Q15291 538 aaKnown RBP4.61□□□□□ -1.67
PFDN4-202ENST00000441080 SNAPC1Q16533 368 aa4.61□□□□□ -1.67
PFDN4-202ENST00000441080 STPG1Q5TH74 334 aa4.61□□□□□ -1.67
PFDN4-202ENST00000441080 DENND5BQ6ZUT9 1274 aa4.61□□□□□ -1.67
PFDN4-202ENST00000441080 TMEM173Q86WV6 379 aaPredicted RBP4.61□□□□□ -1.67
PFDN4-202ENST00000441080 L3MBTL4Q8NA19 623 aa4.61□□□□□ -1.67
PFDN4-202ENST00000441080 POGLUT1Q8NBL1 392 aa4.61□□□□□ -1.67
PFDN4-202ENST00000441080 PAPD5Q8NDF8 572 aaKnown RBP4.61□□□□□ -1.67
PFDN4-202ENST00000441080 OR2AJ1Q8NGZ0 328 aa4.61□□□□□ -1.67
PFDN4-202ENST00000441080 ST6GAL2Q96JF0 529 aa4.61□□□□□ -1.67
PFDN4-202ENST00000441080 C17orf77Q96MU5 243 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms