RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 MED8Q96G25 268 aa19.41■□□□□ 0.7
SHROOM1-204ENST00000440118 TRIT1Q9H3H1 467 aaKnown RBP19.41■□□□□ 0.7
SHROOM1-204ENST00000440118 NLE1Q9NVX2 485 aaPredicted RBP19.41■□□□□ 0.7
SHROOM1-204ENST00000440118 SIDT1Q9NXL6 827 aaKnown RBP19.41■□□□□ 0.7
SHROOM1-204ENST00000440118 ZDHHC3Q9NYG2 299 aa19.41■□□□□ 0.7
SHROOM1-204ENST00000440118 PILRAQ9UKJ1 303 aa19.41■□□□□ 0.7
SHROOM1-204ENST00000440118 HEBP2Q9Y5Z4 205 aa19.41■□□□□ 0.7
SHROOM1-204ENST00000440118 COLEC10Q9Y6Z7 277 aa19.41■□□□□ 0.7
SHROOM1-204ENST00000440118 KIF1CO43896 1103 aaKnown RBP19.4■□□□□ 0.7
SHROOM1-204ENST00000440118 ACRV1P26436 265 aa19.4■□□□□ 0.7
SHROOM1-204ENST00000440118 MAP4P27816 1152 aaKnown RBP19.4■□□□□ 0.7
SHROOM1-204ENST00000440118 FDFT1P37268 417 aa19.4■□□□□ 0.7
SHROOM1-204ENST00000440118 SH3BP2P78314 561 aa19.4■□□□□ 0.7
SHROOM1-204ENST00000440118 CYP4F2P78329 520 aa19.4■□□□□ 0.7
SHROOM1-204ENST00000440118 CACNG1Q06432 222 aa19.4■□□□□ 0.7
SHROOM1-204ENST00000440118 CDH17Q12864 832 aa19.4■□□□□ 0.7
SHROOM1-204ENST00000440118 MSLNQ13421 630 aaPredicted RBP19.4■□□□□ 0.7
SHROOM1-204ENST00000440118 ZNF605Q86T29 641 aa19.4■□□□□ 0.7
SHROOM1-204ENST00000440118 OR52K1Q8NGK4 314 aa19.4■□□□□ 0.7
SHROOM1-204ENST00000440118 LINC00615Q96LM1 132 aaPredicted RBP19.4■□□□□ 0.7
SHROOM1-204ENST00000440118 RMDN2Q96LZ7 410 aa19.4■□□□□ 0.7
SHROOM1-204ENST00000440118 INSM2Q96T92 566 aaPredicted RBP19.4■□□□□ 0.7
SHROOM1-204ENST00000440118 CCM2Q9BSQ5 444 aa19.4■□□□□ 0.7
SHROOM1-204ENST00000440118 EFHD1Q9BUP0 239 aa19.4■□□□□ 0.7
SHROOM1-204ENST00000440118 UBA6A0AVT1 1052 aaPredicted RBP19.39■□□□□ 0.69
SHROOM1-204ENST00000440118 ZNF891A8MT65 544 aaPredicted RBP19.39■□□□□ 0.69
SHROOM1-204ENST00000440118 AGAP14A8MT82 685 aa19.39■□□□□ 0.69
SHROOM1-204ENST00000440118 IFRD1O00458 451 aaPredicted RBP19.39■□□□□ 0.69
SHROOM1-204ENST00000440118 WT1P19544 449 aaPredicted RBP19.39■□□□□ 0.69
SHROOM1-204ENST00000440118 NDUFS1P28331 727 aa19.39■□□□□ 0.69
SHROOM1-204ENST00000440118 PPP1CAP62136 330 aa19.39■□□□□ 0.69
SHROOM1-204ENST00000440118 PRKAA1Q13131 559 aa19.39■□□□□ 0.69
SHROOM1-204ENST00000440118 LAMB3Q13751 1172 aa19.39■□□□□ 0.69
SHROOM1-204ENST00000440118 SKIDA1Q1XH10 827 aa19.39■□□□□ 0.69
SHROOM1-204ENST00000440118 CCDC38Q502W7 563 aa19.39■□□□□ 0.69
SHROOM1-204ENST00000440118 ESX1Q8N693 406 aa19.39■□□□□ 0.69
SHROOM1-204ENST00000440118 SIDT2Q8NBJ9 832 aaKnown RBP19.39■□□□□ 0.69
SHROOM1-204ENST00000440118 SPDYE1Q8NFV5 336 aaPredicted RBP19.39■□□□□ 0.69
SHROOM1-204ENST00000440118 UBXN4Q92575 508 aa19.39■□□□□ 0.69
SHROOM1-204ENST00000440118 RNF31Q96EP0 1072 aa19.39■□□□□ 0.69
SHROOM1-204ENST00000440118 STAMBPL1Q96FJ0 436 aa19.39■□□□□ 0.69
SHROOM1-204ENST00000440118 RAB6BQ9NRW1 208 aa19.39■□□□□ 0.69
SHROOM1-204ENST00000440118 HRASLS2Q9NWW9 162 aa19.39■□□□□ 0.69
SHROOM1-204ENST00000440118 SMARCAL1Q9NZC9 954 aa19.39■□□□□ 0.69
SHROOM1-204ENST00000440118 EPHA6Q9UF33 1036 aa19.39■□□□□ 0.69
SHROOM1-204ENST00000440118 LNPEPQ9UIQ6 1025 aa19.39■□□□□ 0.69
SHROOM1-204ENST00000440118 CFAP46Q8IYW2 2715 aa19.39■□□□□ 0.69
SHROOM1-204ENST00000440118 ZNF462Q96JM2 2506 aa19.39■□□□□ 0.69
SHROOM1-204ENST00000440118 HEATR9A2RTY3 570 aa19.38■□□□□ 0.69
SHROOM1-204ENST00000440118 OR5K3A6NET4 321 aa19.38■□□□□ 0.69
SHROOM1-204ENST00000440118 H7C0S8 307 aa19.38■□□□□ 0.69
SHROOM1-204ENST00000440118 MSNP26038 577 aaKnown RBP19.38■□□□□ 0.69
SHROOM1-204ENST00000440118 CDKN1CP49918 316 aaPredicted RBP19.38■□□□□ 0.69
SHROOM1-204ENST00000440118 TUBB3Q13509 450 aa19.38■□□□□ 0.69
SHROOM1-204ENST00000440118 IL11RAQ14626 422 aa19.38■□□□□ 0.69
SHROOM1-204ENST00000440118 OASLQ15646 514 aaKnown RBP19.38■□□□□ 0.69
SHROOM1-204ENST00000440118 MEI1Q5TIA1 1274 aa19.38■□□□□ 0.69
SHROOM1-204ENST00000440118 UNC5BQ8IZJ1 945 aa19.38■□□□□ 0.69
SHROOM1-204ENST00000440118 CDKN2AIPNLQ96HQ2 116 aa19.38■□□□□ 0.69
SHROOM1-204ENST00000440118 SEMA4CQ9C0C4 833 aa19.38■□□□□ 0.69
SHROOM1-204ENST00000440118 RAB33BQ9H082 229 aa19.38■□□□□ 0.69
SHROOM1-204ENST00000440118 KIR3DX1Q9H7L2 352 aa19.38■□□□□ 0.69
SHROOM1-204ENST00000440118 COG4Q9H9E3 785 aa19.38■□□□□ 0.69
SHROOM1-204ENST00000440118 ETNK1Q9HBU6 452 aa19.38■□□□□ 0.69
SHROOM1-204ENST00000440118 PDE7BQ9NP56 450 aa19.38■□□□□ 0.69
SHROOM1-204ENST00000440118 SLC24A2Q9UI40 661 aa19.38■□□□□ 0.69
SHROOM1-204ENST00000440118 TMEM184BQ9Y519 407 aaPredicted RBP19.38■□□□□ 0.69
SHROOM1-204ENST00000440118 TLCD2A6NGC4 264 aa19.37■□□□□ 0.69
SHROOM1-204ENST00000440118 APRTP07741 180 aa19.37■□□□□ 0.69
SHROOM1-204ENST00000440118 PRSS56P0CW18 603 aa19.37■□□□□ 0.69
SHROOM1-204ENST00000440118 GSTA5Q7RTV2 222 aa19.37■□□□□ 0.69
SHROOM1-204ENST00000440118 PPP1R3BQ86XI6 285 aa19.37■□□□□ 0.69
SHROOM1-204ENST00000440118 LILRA3Q8N6C8 439 aaPredicted RBP19.37■□□□□ 0.69
SHROOM1-204ENST00000440118 ZFPM2Q8WW38 1151 aa19.37■□□□□ 0.69
SHROOM1-204ENST00000440118 FERD3LQ96RJ6 166 aa19.37■□□□□ 0.69
SHROOM1-204ENST00000440118 CD180Q99467 661 aa19.37■□□□□ 0.69
SHROOM1-204ENST00000440118 TTC1Q99614 292 aa19.37■□□□□ 0.69
SHROOM1-204ENST00000440118 SOHLH2Q9NX45 425 aa19.37■□□□□ 0.69
SHROOM1-204ENST00000440118 PAK5Q9P286 719 aa19.37■□□□□ 0.69
SHROOM1-204ENST00000440118 RARRES3Q9UL19 164 aa19.37■□□□□ 0.69
SHROOM1-204ENST00000440118 SPTA1P02549 2419 aa19.36■□□□□ 0.69
SHROOM1-204ENST00000440118 C17orf113A0A1B0GUU1 675 aa19.36■□□□□ 0.69
SHROOM1-204ENST00000440118 GSAPA4D1B5 854 aa19.36■□□□□ 0.69
SHROOM1-204ENST00000440118 OR6C74A6NCV1 312 aa19.36■□□□□ 0.69
SHROOM1-204ENST00000440118 SGTAO43765 313 aa19.36■□□□□ 0.69
SHROOM1-204ENST00000440118 KIAA0754O94854 1291 aa19.36■□□□□ 0.69
SHROOM1-204ENST00000440118 FAM87AP0C7U9 286 aa19.36■□□□□ 0.69
SHROOM1-204ENST00000440118 PRKAR1AP10644 381 aa19.36■□□□□ 0.69
SHROOM1-204ENST00000440118 NELFEP18615 380 aaKnown RBP19.36■□□□□ 0.69
SHROOM1-204ENST00000440118 NSG1P42857 185 aa19.36■□□□□ 0.69
SHROOM1-204ENST00000440118 ARCN1P48444 511 aaKnown RBP19.36■□□□□ 0.69
SHROOM1-204ENST00000440118 ABHD18Q0P651 414 aa19.36■□□□□ 0.69
SHROOM1-204ENST00000440118 DBN1Q16643 649 aa19.36■□□□□ 0.69
SHROOM1-204ENST00000440118 SYTL3Q4VX76 610 aa19.36■□□□□ 0.69
SHROOM1-204ENST00000440118 AFTPHQ6ULP2 937 aa19.36■□□□□ 0.69
SHROOM1-204ENST00000440118 C6orf15Q6UXA7 325 aaPredicted RBP19.36■□□□□ 0.69
SHROOM1-204ENST00000440118 CLDN19Q8N6F1 224 aa19.36■□□□□ 0.69
SHROOM1-204ENST00000440118 ACVR1CQ8NER5 493 aa19.36■□□□□ 0.69
SHROOM1-204ENST00000440118 PPHLN1Q8NEY8 458 aaKnown RBP19.36■□□□□ 0.69
SHROOM1-204ENST00000440118 MAIP1Q8WWC4 291 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms