RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 KCNJ9Q92806 393 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 IRF7Q92985 503 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 SLC35B4Q969S0 331 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 ESAMQ96AP7 390 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 C12orf43Q96C57 262 aaKnown RBP13.96□□□□□ -0.17
LIMD1-202ENST00000440097 L3HYPDHQ96EM0 354 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 BOCQ9BWV1 1114 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 CERS4Q9HA82 394 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 CD274Q9NZQ7 290 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 IKZF3Q9UKT9 509 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 DOLKQ9UPQ8 538 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 HCFC2Q9Y5Z7 792 aa13.96□□□□□ -0.17
LIMD1-202ENST00000440097 OAS3Q9Y6K5 1087 aaKnown RBP13.96□□□□□ -0.17
LIMD1-202ENST00000440097 COL6A3P12111 3177 aa13.96□□□□□ -0.18
LIMD1-202ENST00000440097 GLYATL1P3A0A0U1RQE8 302 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 TRIM38O00635 465 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 TRIM24O15164 1050 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 BMP10O95393 424 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 FGF19O95750 216 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 ECT2LQ008S8 904 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 PPP1R3AQ16821 1122 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 ASTLQ6HA08 431 aaPredicted RBP13.95□□□□□ -0.18
LIMD1-202ENST00000440097 UGT3A1Q6NUS8 523 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 DPY19L3Q6ZPD9 716 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 ZSWIM9Q86XI8 627 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 CD200R1Q8TD46 325 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 CCDC97Q96F63 343 aaPredicted RBP13.95□□□□□ -0.18
LIMD1-202ENST00000440097 CIB1Q99828 191 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 CIPCQ9C0C6 399 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 CLK4Q9HAZ1 481 aaKnown RBP13.95□□□□□ -0.18
LIMD1-202ENST00000440097 IL26Q9NPH9 171 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 SNX13Q9Y5W8 968 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 COPG1Q9Y678 874 aaKnown RBP13.95□□□□□ -0.18
LIMD1-202ENST00000440097 DENND4CQ5VZ89 1909 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 DNAH14Q0VDD8 3507 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 NPIPB15A6NHN6 443 aaPredicted RBP13.95□□□□□ -0.18
LIMD1-202ENST00000440097 HTRA2O43464 458 aaPredicted RBP13.95□□□□□ -0.18
LIMD1-202ENST00000440097 SH3BP2P78314 561 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 NFKB2Q00653 900 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 GSTM4Q03013 218 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 RELAQ04206 551 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 NFATC2Q13469 925 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 GRAMD4Q6IC98 578 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 CERS6Q6ZMG9 384 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 USP45Q70EL2 814 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 FUBP1Q96AE4 644 aaKnown RBP13.95□□□□□ -0.18
LIMD1-202ENST00000440097 VPS50Q96JG6 964 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 COX4I2Q96KJ9 171 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 ZSWIM3Q96MP5 696 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 PAIP1Q9H074 479 aaKnown RBP13.95□□□□□ -0.18
LIMD1-202ENST00000440097 ZBTB26Q9HCK0 441 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 SPHK2Q9NRA0 654 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 TBC1D23Q9NUY8 699 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 CDC14AQ9UNH5 594 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 SLC8A2Q9UPR5 921 aa13.95□□□□□ -0.18
LIMD1-202ENST00000440097 MRPS23Q9Y3D9 190 aaKnown RBP13.95□□□□□ -0.18
LIMD1-202ENST00000440097 PSMD12O00232 456 aaPredicted RBP13.94□□□□□ -0.18
LIMD1-202ENST00000440097 GIPC1O14908 333 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 UBDO15205 165 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 BPIP17213 487 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 PFKLP17858 780 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 DDX6P26196 483 aaKnown RBP eCLIP13.94□□□□□ -0.18
LIMD1-202ENST00000440097 TGFBIQ15582 683 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 GPSM1Q86YR5 675 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 PCDH20Q8N6Y1 951 aaKnown RBP13.94□□□□□ -0.18
LIMD1-202ENST00000440097 FAM47BQ8NA70 645 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 ST13P5Q8NFI4 369 aaPredicted RBP13.94□□□□□ -0.18
LIMD1-202ENST00000440097 HM13Q8TCT9 377 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 SORCS1Q8WY21 1168 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 SUV39H2Q9H5I1 410 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 HS3ST2Q9Y278 367 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 SLC22A2O15244 555 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 MOSPD3O75425 235 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 SERPINB7O75635 380 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 ESRRGP62508 458 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 HERC3Q15034 1050 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 CHRNA6Q15825 494 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 LRRC66Q68CR7 880 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 SNX20Q7Z614 316 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 RBFAQ8N0V3 343 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 SNX31Q8N9S9 440 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 SP7Q8TDD2 431 aaPredicted RBP13.94□□□□□ -0.18
LIMD1-202ENST00000440097 CYB5D2Q8WUJ1 264 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 ASB9Q96DX5 294 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 C19orf60Q96EN9 201 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 KCNA7Q96RP8 456 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 MTIF3Q9H2K0 278 aaKnown RBP13.94□□□□□ -0.18
LIMD1-202ENST00000440097 SELENONQ9NZV5 590 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 GRXCR1A8MXD5 290 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 CDK14O94921 469 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 STAMBPO95630 424 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 C8BP07358 591 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 CSNK1DP48730 415 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 AGTR2P50052 363 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 CLCQ05315 142 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 GALNT1Q10472 559 aaPredicted RBP13.94□□□□□ -0.18
LIMD1-202ENST00000440097 ZBED5Q49AG3 693 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 PDCD4Q53EL6 469 aaKnown RBP13.94□□□□□ -0.18
LIMD1-202ENST00000440097 ANKS6Q68DC2 871 aa13.94□□□□□ -0.18
LIMD1-202ENST00000440097 CLYBLQ8N0X4 340 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms