RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 CEP70Q8NHQ1 597 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 FAM45AQ8TCE6 357 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 FRS2Q8WU20 508 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 WDR60Q8WVS4 1066 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 ARRDC3Q96B67 414 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 FEM1CQ96JP0 617 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 THTPAQ9BU02 230 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 CINPQ9BW66 212 aaPredicted RBP4.7□□□□□ -1.66
EDEM3-203ENST00000439962 GATA5Q9BWX5 397 aaPredicted RBP4.7□□□□□ -1.66
EDEM3-203ENST00000439962 COG4Q9H9E3 785 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 EFCAB1Q9HAE3 211 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 PFDN4Q9NQP4 134 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 SUCOQ9UBS9 1254 aaKnown RBP4.7□□□□□ -1.66
EDEM3-203ENST00000439962 UBA2Q9UBT2 640 aaPredicted RBP4.7□□□□□ -1.66
EDEM3-203ENST00000439962 IL36AQ9UHA7 158 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 STOML2Q9UJZ1 356 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 RAB26Q9ULW5 256 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 PSMD13Q9UNM6 376 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.7□□□□□ -1.66
EDEM3-203ENST00000439962 PCDHB9Q9Y5E1 797 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 SNX11Q9Y5W9 270 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 PKD1L2Q7Z442 2459 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 CNTRLQ7Z7A1 2325 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 POM121BA6NF01 834 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 MROH6A6NGR9 719 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 ENO4A6NNW6 628 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 LATO43561 262 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 DENRO43583 198 aaKnown RBP4.7□□□□□ -1.66
EDEM3-203ENST00000439962 CD160O95971 181 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 JCHAINP01591 159 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 FESP07332 822 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 RPSAP08865 295 aaKnown RBP4.7□□□□□ -1.66
EDEM3-203ENST00000439962 ALPIP09923 528 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 GNSP15586 552 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 HOXB6P17509 224 aaKnown RBP4.7□□□□□ -1.66
EDEM3-203ENST00000439962 ITGAXP20702 1163 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 SIM1P81133 766 aaPredicted RBP4.7□□□□□ -1.66
EDEM3-203ENST00000439962 FOXM1Q08050 763 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 BNIP3Q12983 259 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 OLIG2Q13516 323 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 CAMK2GQ13555 558 aaPredicted RBP4.7□□□□□ -1.66
EDEM3-203ENST00000439962 SQLEQ14534 574 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 USP10Q14694 798 aaKnown RBP4.7□□□□□ -1.66
EDEM3-203ENST00000439962 GRM3Q14832 879 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 ZNF528Q3MIS6 628 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 PPM1JQ5JR12 505 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 OGFRL1Q5TC84 451 aaPredicted RBP4.7□□□□□ -1.66
EDEM3-203ENST00000439962 DOK6Q6PKX4 331 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 SYT12Q8IV01 421 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 PELI3Q8N2H9 469 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 TTC30BQ8N4P2 665 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 RHEBL1Q8TAI7 183 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 WFIKKN2Q8TEU8 576 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 IFT43Q96FT9 208 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 GPR78Q96P69 363 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 TCF12Q99081 682 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 APOL2Q9BQE5 337 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 EBF4Q9BQW3 602 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 FAM126AQ9BYI3 521 aaPredicted RBP4.7□□□□□ -1.66
EDEM3-203ENST00000439962 KLHL4Q9C0H6 718 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 C12orf65Q9H3J6 166 aaKnown RBP4.7□□□□□ -1.66
EDEM3-203ENST00000439962 MEAF6Q9HAF1 191 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 ZBTB26Q9HCK0 441 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 ITM2CQ9NQX7 267 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 IARS2Q9NSE4 1012 aaKnown RBP4.7□□□□□ -1.66
EDEM3-203ENST00000439962 INTS10Q9NVR2 710 aaKnown RBP4.7□□□□□ -1.66
EDEM3-203ENST00000439962 TBC1D30Q9Y2I9 924 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 ARIH1Q9Y4X5 557 aaPredicted RBP4.7□□□□□ -1.66
EDEM3-203ENST00000439962 OR1A2Q9Y585 309 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 OR51B4Q9Y5P0 310 aa4.7□□□□□ -1.66
EDEM3-203ENST00000439962 TRBV23OR9-2A0A075B6M9 112 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 LOC285095A0A1B0GVY8 99 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 FAM95CA0A1B0GW59 222 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 ILVBLA1L0T0 632 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 C16orf96A6NNT2 1141 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 C1QTNF3-AMACRE9PGA6 284 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 GFRA2O00451 464 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 LILRB5O75023 590 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 ZNF821O75541 412 aaPredicted RBP4.69□□□□□ -1.66
EDEM3-203ENST00000439962 PCCBP05166 539 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 FGF1P05230 155 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 FGF4P08620 206 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 LTA4HP09960 611 aaKnown RBP4.69□□□□□ -1.66
EDEM3-203ENST00000439962 C7P10643 843 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 TGM1P22735 817 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 NMBRP28336 390 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 ABL2P42684 1182 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 GRIA4P48058 902 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 EPHB1P54762 984 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 SLC12A2P55011 1212 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 C21orf59P57076 290 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 SULT2A1Q06520 285 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 TBL3Q12788 808 aaKnown RBP4.69□□□□□ -1.66
EDEM3-203ENST00000439962 CYLC2Q14093 348 aaPredicted RBP4.69□□□□□ -1.66
EDEM3-203ENST00000439962 HLA-BQ31612 363 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 HSP90AA5PQ58FG0 334 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 TECRLQ5HYJ1 363 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 TSTD2Q5T7W7 516 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 ZNF783Q6ZMS7 281 aa4.69□□□□□ -1.66
EDEM3-203ENST00000439962 BNC2Q6ZN30 1099 aaPredicted RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms