RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 SLC39A1Q9NY26 324 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 EPHA6Q9UF33 1036 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 KLHL3Q9UH77 587 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 ACSL6Q9UKU0 697 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 ADAMTS20P59510 1910 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 PIKFYVEQ9Y2I7 2098 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 OR51F1A6NGY5 319 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 CD3EAPO15446 510 aaKnown RBP10.23□□□□□ -0.77
MCF2L-216ENST00000439475 SGTAO43765 313 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 KDM1AO60341 852 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 NDUFS3O75489 264 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 RASSF9O75901 435 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 C9P02748 559 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 PRSS56P0CW18 603 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 LIPCP11150 499 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 FGF3P11487 239 aaPredicted RBP10.23□□□□□ -0.77
MCF2L-216ENST00000439475 MLNP12872 115 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 CCL4P13236 92 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 MGAT1P26572 445 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 ITPKBP27987 946 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 CSF2RBP32927 897 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 TTPAP49638 278 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 TERF1P54274 439 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 TMPRSS3P57727 454 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 PRKAA1Q13131 559 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 PPP1R7Q15435 360 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 CAPRIN2Q6IMN6 1127 aaKnown RBP10.23□□□□□ -0.77
MCF2L-216ENST00000439475 CASC4Q6P4E1 433 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 CEACAM20Q6UY09 585 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 PACS1Q6VY07 963 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 ARHGAP22Q7Z5H3 698 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 OOSP2Q86WS3 158 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 PIANPQ8IYJ0 282 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 MPP5Q8N3R9 675 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 OTUD6BQ8N6M0 293 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 MCUQ8NE86 351 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 COG1Q8WTW3 980 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 ELMO1Q92556 727 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 C9orf72Q96LT7 481 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 TGM7Q96PF1 710 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 PANX3Q96QZ0 392 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 NAPGQ99747 312 aaPredicted RBP10.23□□□□□ -0.77
MCF2L-216ENST00000439475 DDA1Q9BW61 102 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 XAB2Q9HCS7 855 aaKnown RBP10.23□□□□□ -0.77
MCF2L-216ENST00000439475 TMEM9Q9P0T7 183 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 SAMD15Q9P1V8 674 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 RNF14Q9UBS8 474 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 SLC2A6Q9UGQ3 507 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 PCDHGA3Q9Y5H0 932 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 SAR1BQ9Y6B6 198 aa10.23□□□□□ -0.77
MCF2L-216ENST00000439475 PRAMEF33A0A0G2JMD5 474 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 CTAGE9A4FU28 777 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 SDR42E2A6NKP2 422 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 C9orf172C9J069 976 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 MATN2O00339 956 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 PRMT5O14744 637 aaPredicted RBP10.22□□□□□ -0.77
MCF2L-216ENST00000439475 KPNA5O15131 536 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 POLR1CO15160 346 aaPredicted RBP10.22□□□□□ -0.77
MCF2L-216ENST00000439475 ZNF185O15231 689 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 MAP3K7O43318 606 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 PRAMEF10O60809 474 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 ANKRD34CP0C6C1 535 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 ETV5P41161 510 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 MAGEA6P43360 314 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 CAPZBP47756 277 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 ARL4DP49703 201 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 ATP1A2P50993 1020 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 MC2RQ01718 297 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 TLE3Q04726 772 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 KCNJ11Q14654 390 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 SYTL3Q4VX76 610 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 CACHD1Q5VU97 1274 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 PAPD7Q5XG87 772 aaKnown RBP10.22□□□□□ -0.77
MCF2L-216ENST00000439475 PTRHD1Q6GMV3 140 aaKnown RBP10.22□□□□□ -0.77
MCF2L-216ENST00000439475 MRNIPQ6NTE8 343 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 IRGCQ6NXR0 463 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 TTC27Q6P3X3 843 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 GPR155Q7Z3F1 870 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 CLDN19Q8N6F1 224 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 ACVR1CQ8NER5 493 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 GABPB2Q8TAK5 448 aaPredicted RBP10.22□□□□□ -0.77
MCF2L-216ENST00000439475 UBXN4Q92575 508 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 TFGQ92734 400 aaPredicted RBP10.22□□□□□ -0.77
MCF2L-216ENST00000439475 ART4Q93070 314 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 ZNF778Q96MU6 729 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 CD180Q99467 661 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 KIFC1Q9BW19 673 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 CARD6Q9BX69 1037 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 KIR3DX1Q9H7L2 352 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 MVB12BQ9H7P6 319 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 FBXO8Q9NRD0 319 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 HRASLS2Q9NWW9 162 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 OCIAD1Q9NX40 245 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 SOX13Q9UN79 622 aa10.22□□□□□ -0.77
MCF2L-216ENST00000439475 CFAP20Q9Y6A4 193 aaKnown RBP10.22□□□□□ -0.77
MCF2L-216ENST00000439475 MN1Q10571 1320 aaPredicted RBP10.22□□□□□ -0.77
MCF2L-216ENST00000439475 TCRBV7S3A2A0A539 114 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 UBA6A0AVT1 1052 aaPredicted RBP10.21□□□□□ -0.77
MCF2L-216ENST00000439475 PMS2P1A4D2B8 440 aa10.21□□□□□ -0.77
MCF2L-216ENST00000439475 STMND1H3BQB6 276 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms