RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 CPNE5Q9HCH3 593 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 TREX1Q9NSU2 369 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 NT5C1B-RDH14C9J2C7 533 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 MAN1A2O60476 641 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 NTRK1P04629 796 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 FGF4P08620 206 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 LINC00032P0C843 101 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 PCNAP12004 261 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 KCNE1P15382 129 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 CD40LGP29965 261 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 CASP2P42575 452 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 NR4A2P43354 598 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 CLCN5P51795 746 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 GLYATQ6IB77 296 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 KIAA0930Q6ICG6 404 aaPredicted RBP8.45□□□□□ -1.06
HPS4-206ENST00000439453 LAIR2Q6ISS4 152 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 NEK10Q6ZWH5 1172 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 KLHDC8BQ8IXV7 354 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 CRYBG2Q8N1P7 616 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 OR13J1Q8NGT2 312 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 TSPEARQ8WU66 669 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 PHF10Q8WUB8 498 aaKnown RBP8.45□□□□□ -1.06
HPS4-206ENST00000439453 EXT2Q93063 718 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 RDH12Q96NR8 316 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 ALOXE3Q9BYJ1 711 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 NACA2Q9H009 215 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 TUBB1Q9H4B7 451 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 NOL6Q9H6R4 1146 aaKnown RBP8.45□□□□□ -1.06
HPS4-206ENST00000439453 SP140LQ9H930 580 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 SMURF2Q9HAU4 748 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 NECTIN3Q9NQS3 549 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 POLG2Q9UHN1 485 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 NAALAD2Q9Y3Q0 740 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 GPR45Q9Y5Y3 372 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 TYW5A2RUC4 315 aaKnown RBP8.45□□□□□ -1.06
HPS4-206ENST00000439453 CACNG3O60359 315 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 RB1P06400 928 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 NDUFV1P49821 464 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 DIO3P55073 304 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 HECTD2Q5U5R9 776 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 GLB1LQ6UWU2 654 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 HFE2Q6ZVN8 426 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 ZDHHC13Q8IUH4 622 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 CLIP4Q8N3C7 705 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 HTRA1Q92743 480 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 NTAN1Q96AB6 310 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 CELF6Q96J87 481 aaKnown RBP8.45□□□□□ -1.06
HPS4-206ENST00000439453 FEM1AQ9BSK4 669 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 MRPL9Q9BYD2 267 aaKnown RBP8.45□□□□□ -1.06
HPS4-206ENST00000439453 AMBRA1Q9C0C7 1298 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 TP63Q9H3D4 680 aaPredicted RBP8.45□□□□□ -1.06
HPS4-206ENST00000439453 GOLGA2P5Q9HBQ8 144 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 PAK1IP1Q9NWT1 392 aaPredicted RBP8.45□□□□□ -1.06
HPS4-206ENST00000439453 SLAMF8Q9P0V8 285 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 BTRCQ9Y297 605 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 NOTCH4Q99466 2003 aa8.45□□□□□ -1.06
HPS4-206ENST00000439453 SMIM28A0A1B0GU29 152 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 G3V2T6 193 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 SLC1A7O00341 560 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 TULP3O75386 442 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 EEDO75530 441 aaKnown RBP8.44□□□□□ -1.06
HPS4-206ENST00000439453 FGF18O76093 207 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 LRIG2O94898 1065 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 KRT75O95678 551 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 S100BP04271 92 aaPredicted RBP8.44□□□□□ -1.06
HPS4-206ENST00000439453 LAG3P18627 525 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 PIGAP37287 484 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 MTHFRP42898 656 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 ERVFC1P60507 584 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 VBP1P61758 197 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 SLC13A2Q13183 592 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 SLC14A2Q15849 920 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 GPR158Q5T848 1215 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 KANK2Q63ZY3 851 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 ADGRD2Q7Z7M1 963 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 RBM23Q86U06 439 aaKnown RBP8.44□□□□□ -1.06
HPS4-206ENST00000439453 ISCA2Q86U28 154 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 GABPB2Q8TAK5 448 aaPredicted RBP8.44□□□□□ -1.06
HPS4-206ENST00000439453 FAR1Q8WVX9 515 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 SDCCAG3Q96C92 435 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 TEX37Q96LM6 180 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 DACH2Q96NX9 599 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 SLC2A13Q96QE2 648 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 KCNA7Q96RP8 456 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 INTS7Q9NVH2 962 aaKnown RBP8.44□□□□□ -1.06
HPS4-206ENST00000439453 RWDD3Q9Y3V2 267 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 SNX10Q9Y5X0 201 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 TTC34A8MYJ7 566 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 RGS13O14921 159 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 SNPHO15079 494 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 ASNA1O43681 348 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 SEC24AO95486 1093 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 CHEK2O96017 543 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 RAP2AP10114 183 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 CHRNA4P43681 627 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 PPP5CP53041 499 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 EMX1Q04741 257 aaPredicted RBP8.44□□□□□ -1.06
HPS4-206ENST00000439453 SCAPQ12770 1279 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 GPM6BQ13491 265 aa8.44□□□□□ -1.06
HPS4-206ENST00000439453 KCNC3Q14003 757 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms