RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 RBM48Q5RL73 367 aaKnown RBP15.59■□□□□ 0.09
DHFR-201ENST00000439211 NOXA1Q86UR1 476 aa15.59■□□□□ 0.09
DHFR-201ENST00000439211 OR8H3Q8N146 312 aa15.59■□□□□ 0.09
DHFR-201ENST00000439211 TXNDC5Q8NBS9 432 aaKnown RBP15.59■□□□□ 0.09
DHFR-201ENST00000439211 CCDC126Q96EE4 140 aa15.59■□□□□ 0.09
DHFR-201ENST00000439211 TRIM8Q9BZR9 551 aa15.59■□□□□ 0.09
DHFR-201ENST00000439211 RGS17Q9UGC6 210 aaPredicted RBP15.59■□□□□ 0.09
DHFR-201ENST00000439211 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.59■□□□□ 0.092e-6■■■□□ 15
DHFR-201ENST00000439211 PCDHB3Q9Y5E6 796 aa15.59■□□□□ 0.09
DHFR-201ENST00000439211 CCDC154A6NI56 674 aa15.59■□□□□ 0.09
DHFR-201ENST00000439211 GRID2O43424 1007 aa15.59■□□□□ 0.09
DHFR-201ENST00000439211 PAGE1O75459 146 aa15.59■□□□□ 0.09
DHFR-201ENST00000439211 IL7P13232 177 aa15.59■□□□□ 0.09
DHFR-201ENST00000439211 ATF6P18850 670 aa15.59■□□□□ 0.09
DHFR-201ENST00000439211 MARCH8Q5T0T0 291 aa15.59■□□□□ 0.09
DHFR-201ENST00000439211 GPR158Q5T848 1215 aa15.59■□□□□ 0.09
DHFR-201ENST00000439211 METTL4Q8N3J2 472 aa15.59■□□□□ 0.09
DHFR-201ENST00000439211 CNDP2Q96KP4 475 aaKnown RBP15.59■□□□□ 0.09
DHFR-201ENST00000439211 FBRSL1Q9HCM7 1045 aaKnown RBP15.59■□□□□ 0.09
DHFR-201ENST00000439211 RGS18Q9NS28 235 aa15.59■□□□□ 0.09
DHFR-201ENST00000439211 POLR3BQ9NW08 1133 aaPredicted RBP15.59■□□□□ 0.09
DHFR-201ENST00000439211 USP3Q9Y6I4 520 aa15.59■□□□□ 0.09
DHFR-201ENST00000439211 XPNPEP2O43895 674 aa15.59■□□□□ 0.09
DHFR-201ENST00000439211 IPO13O94829 963 aaKnown RBP15.59■□□□□ 0.09
DHFR-201ENST00000439211 CXCR3P49682 368 aa15.59■□□□□ 0.09
DHFR-201ENST00000439211 EPS8Q12929 822 aa15.59■□□□□ 0.09
DHFR-201ENST00000439211 NFYCQ13952 458 aa15.59■□□□□ 0.09
DHFR-201ENST00000439211 SQLEQ14534 574 aa15.59■□□□□ 0.09
DHFR-201ENST00000439211 CCDC85BQ15834 202 aaPredicted RBP15.59■□□□□ 0.09
DHFR-201ENST00000439211 STYXQ8WUJ0 223 aa15.59■□□□□ 0.09
DHFR-201ENST00000439211 SLC9A7Q96T83 725 aa15.59■□□□□ 0.09
DHFR-201ENST00000439211 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.59■□□□□ 0.09
DHFR-201ENST00000439211 EXOSC4Q9NPD3 245 aaKnown RBP15.59■□□□□ 0.09
DHFR-201ENST00000439211 SLC35C2Q9NQQ7 365 aa15.59■□□□□ 0.09
DHFR-201ENST00000439211 BTRCQ9Y297 605 aa15.59■□□□□ 0.09
DHFR-201ENST00000439211 HCN4Q9Y3Q4 1203 aa15.59■□□□□ 0.09
DHFR-201ENST00000439211 MCM3APO60318 1980 aa15.58■□□□□ 0.09
DHFR-201ENST00000439211 TSPAN3O60637 253 aa15.58■□□□□ 0.09
DHFR-201ENST00000439211 CHRNA1P02708 482 aa15.58■□□□□ 0.09
DHFR-201ENST00000439211 SLC15A1P46059 708 aa15.58■□□□□ 0.09
DHFR-201ENST00000439211 PPP1R8Q12972 351 aaKnown RBP15.58■□□□□ 0.09
DHFR-201ENST00000439211 CYBRD1Q53TN4 286 aa15.58■□□□□ 0.09
DHFR-201ENST00000439211 MARC1Q5VT66 337 aa15.58■□□□□ 0.09
DHFR-201ENST00000439211 SPESP1Q6UW49 350 aa15.58■□□□□ 0.09
DHFR-201ENST00000439211 SCIMPQ6UWF3 145 aa15.58■□□□□ 0.09
DHFR-201ENST00000439211 GPR142Q7Z601 462 aa15.58■□□□□ 0.09
DHFR-201ENST00000439211 TRIB2Q92519 343 aa15.58■□□□□ 0.09
DHFR-201ENST00000439211 LGALS12Q96DT0 336 aa15.58■□□□□ 0.09
DHFR-201ENST00000439211 NSMCE2Q96MF7 247 aa15.58■□□□□ 0.09
DHFR-201ENST00000439211 NTN4Q9HB63 628 aa15.58■□□□□ 0.09
DHFR-201ENST00000439211 USE1Q9NZ43 259 aa15.58■□□□□ 0.09
DHFR-201ENST00000439211 CPA4Q9UI42 421 aa15.58■□□□□ 0.09
DHFR-201ENST00000439211 A0A1W2PRG6 482 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 ZNF195O14628 629 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 ACOX3O15254 700 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 NOBOXO60393 691 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 SNAI1O95863 264 aaPredicted RBP15.58■□□□□ 0.08
DHFR-201ENST00000439211 AXLP30530 894 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 PSEN2P49810 448 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 RAD51Q06609 339 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 SEMA3AQ14563 771 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 CLVS2Q5SYC1 327 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 ZNF598Q86UK7 904 aaKnown RBP15.58■□□□□ 0.08
DHFR-201ENST00000439211 ARRDC4Q8NCT1 418 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 C7orf57Q8NEG2 295 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 NECTIN4Q96NY8 510 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 KAT8Q9H7Z6 458 aaKnown RBP15.58■□□□□ 0.08
DHFR-201ENST00000439211 TPRKBQ9Y3C4 175 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 SLC22A2O15244 555 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 PGK1P00558 417 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 CD36P16671 472 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 CTRB1P17538 263 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 ZNF235Q14590 738 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 C6orf141Q5SZD1 244 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 GARNL3Q5VVW2 1013 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 CTRB2Q6GPI1 263 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 PLEKHH3Q7Z736 793 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 GALNT11Q8NCW6 608 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 ZNF540Q8NDQ6 660 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 LILRB1Q8NHL6 650 aaPredicted RBP15.58■□□□□ 0.08
DHFR-201ENST00000439211 SLC39A13Q96H72 371 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 TM9SF2Q99805 663 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 SLC39A8Q9C0K1 460 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 SYTL2Q9HCH5 934 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 FARSBQ9NSD9 589 aaKnown RBP15.58■□□□□ 0.08
DHFR-201ENST00000439211 GIMAP2Q9UG22 337 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 NUFIP1Q9UHK0 495 aaKnown RBP15.58■□□□□ 0.08
DHFR-201ENST00000439211 FAM50BQ9Y247 325 aa15.58■□□□□ 0.08
DHFR-201ENST00000439211 TYW5A2RUC4 315 aaKnown RBP15.57■□□□□ 0.08
DHFR-201ENST00000439211 OR51F1A6NGY5 319 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 AQP12BA6NM10 295 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 CPNE6O95741 557 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 ODC1P11926 461 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 WARSP23381 471 aaKnown RBP15.57■□□□□ 0.08
DHFR-201ENST00000439211 MAP2K4P45985 399 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 BTBD16Q32M84 506 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 IGSF11Q5DX21 431 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 GNASQ5JWF2 1037 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 AQP12AQ8IXF9 295 aa15.57■□□□□ 0.08
DHFR-201ENST00000439211 PIK3C3Q8NEB9 887 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms