RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 RAP1GAP2Q684P5 730 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 DLEU7Q6UYE1 221 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 CYP4Z1Q86W10 505 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 HID1Q8IV36 788 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 ARRDC4Q8NCT1 418 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 PAPD5Q8NDF8 572 aaKnown RBP13.2□□□□□ -0.3
ACTN1-204ENST00000438964 RHOXF1Q8NHV9 184 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 L3HYPDHQ96EM0 354 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 PCED1BQ96HM7 432 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 SLC2A13Q96QE2 648 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 COMMD8Q9NX08 183 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 ZNF451Q9Y4E5 1061 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 N6AMT1Q9Y5N5 214 aa13.2□□□□□ -0.3
ACTN1-204ENST00000438964 MTSS1O43312 755 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 FAM20BO75063 409 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 ECI2O75521 394 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 EEDO75530 441 aaKnown RBP13.19□□□□□ -0.3
ACTN1-204ENST00000438964 ZNF682O95780 498 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 KRT8P05787 483 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 C7P10643 843 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 ADRA1AP35348 466 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 DCTP40126 519 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 SERPINH1P50454 418 aaKnown RBP13.19□□□□□ -0.3
ACTN1-204ENST00000438964 NUDT6P53370 316 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 CRISP3P54108 245 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 LILRA4P59901 499 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 EMX2Q04743 252 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 TNFAIP1Q13829 316 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 SNX17Q15036 470 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 C6orf136Q5SQH8 315 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 CES5AQ6NT32 575 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 IL27RAQ6UWB1 636 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 CEP68Q76N32 757 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 PROX1Q92786 737 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 TSPAN17Q96FV3 270 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 Q96MT0 163 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 ZNF583Q96ND8 569 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 ZNF300Q96RE9 604 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-204ENST00000438964 CITED4Q96RK1 184 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 CGREF1Q99674 301 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 COMMD10Q9Y6G5 202 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 PDE4DIPQ5VU43 2346 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 ITIH1P19827 911 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 CYP2C18P33260 490 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 LIPAP38571 399 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 PPP5CP53041 499 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 GEMP55040 296 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 LCP2Q13094 533 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 CBX2Q14781 532 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-204ENST00000438964 NR6A1Q15406 480 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-204ENST00000438964 GDPD3Q7L5L3 318 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 CIR1Q86X95 450 aaPredicted RBP13.19□□□□□ -0.3
ACTN1-204ENST00000438964 METTL4Q8N3J2 472 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 TTC39CQ8N584 583 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 KRTCAP2Q8N6L1 136 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 VMP1Q96GC9 406 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 TNIP3Q96KP6 325 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 NEDD4LQ96PU5 975 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 FCRL5Q96RD9 977 aa13.19□□□□□ -0.3
ACTN1-204ENST00000438964 IQCF5A8MTL0 148 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 ADM5C9JUS6 153 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 SLC22A1O15245 554 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 MATN4O95460 622 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 UMPSP11172 480 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 HTR1EP28566 365 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 GRK5P34947 590 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 TAF6P49848 677 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 DGKEP52429 567 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 EEFSECP57772 596 aaKnown RBP13.18□□□□□ -0.3
ACTN1-204ENST00000438964 CRY1Q16526 586 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 RFTN2Q52LD8 501 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-204ENST00000438964 DCP2Q8IU60 420 aaKnown RBP13.18□□□□□ -0.3
ACTN1-204ENST00000438964 BEND7Q8N7W2 519 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-204ENST00000438964 DPF3Q92784 378 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 EFHD2Q96C19 240 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-204ENST00000438964 MTFMTQ96DP5 389 aaKnown RBP13.18□□□□□ -0.3
ACTN1-204ENST00000438964 KCNS3Q9BQ31 491 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 UXTQ9UBK9 157 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-204ENST00000438964 OPTCQ9UBM4 332 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 BRCA1P38398 1863 aaKnown RBP13.18□□□□□ -0.3
ACTN1-204ENST00000438964 RHOBTB1O94844 696 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 SERPINA1P01009 418 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 HAPLN1P10915 354 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-204ENST00000438964 CHRNB1P11230 501 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 EDNRBP24530 442 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 ST13P50502 369 aaKnown RBP13.18□□□□□ -0.3
ACTN1-204ENST00000438964 FAM189BP81408 668 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 DAB2P98082 770 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 RFPL4BQ6ZWI9 263 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 CYP2U1Q7Z449 544 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 ATP6V0D2Q8N8Y2 350 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-204ENST00000438964 TP53I13Q8NBR0 393 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-204ENST00000438964 CHST13Q8NET6 341 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 ZBED3Q96IU2 234 aaPredicted RBP13.18□□□□□ -0.3
ACTN1-204ENST00000438964 VAT1Q99536 393 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 TRMOQ9BU70 441 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 ENTPD7Q9NQZ7 604 aa13.18□□□□□ -0.3
ACTN1-204ENST00000438964 THG1LQ9NWX6 298 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms