RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 SDCCAG8Q86SQ7 713 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 FOXRED2Q8IWF2 684 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 TDHQ8IZJ6 230 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 ZNF441Q8N8Z8 693 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 HJURPQ8NCD3 748 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 MAGEC3Q8TD91 643 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 ORAI1Q96D31 301 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 CALML4Q96GE6 196 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 NODALQ96S42 347 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 CMKLR1Q99788 373 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 CENPOQ9BU64 300 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 MAK16Q9BXY0 300 aaKnown RBP3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 SPRY4Q9C004 299 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 PIGMQ9H3S5 423 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 PLK3Q9H4B4 646 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 SEBOXQ9HB31 216 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 ACSS1Q9NUB1 689 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 TERF2IPQ9NYB0 399 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 TMOD3Q9NYL9 352 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 ZNF224Q9NZL3 707 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 COPG2Q9UBF2 871 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 FBXL17Q9UF56 701 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 CLIC4Q9Y696 253 aa3.25□□□□□ -1.89
HMGB3P12-201ENST00000438745 UNC80Q8N2C7 3258 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 PCDH11XQ9BZA7 1347 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 PCDH11YQ9BZA8 1340 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 USP42Q9H9J4 1324 aaKnown RBP3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 HNRNPCL2B2RXH8 293 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 CLGNO14967 610 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 JRKO75564 520 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 TPPPO94811 219 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 PORP16435 677 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 TMEM11P17152 192 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 GABRB1P18505 474 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 BDKRB2P30411 391 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 PRCPP42785 496 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 CAMPP49913 170 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 ACSM2AQ08AH3 577 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 SREBF2Q12772 1141 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 ZBTB17Q13105 803 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 TNFAIP1Q13829 316 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 CTF1Q16619 201 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 KRT24Q2M2I5 525 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 ASTE1Q2TB18 679 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 DUSP28Q4G0W2 176 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 ATP13A5Q4VNC0 1218 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 ACSM2BQ68CK6 577 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 FAM109BQ6ICB4 259 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 KCTD18Q6PI47 426 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 FOXL2NBQ6ZUU3 175 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 TICAM1Q8IUC6 712 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 ADGRF2Q8IZF7 708 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 TAGAPQ8N103 731 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 C1orf131Q8NDD1 294 aaKnown RBP3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 OR2AK2Q8NG84 335 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 PIGBQ92521 554 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 FIG4Q92562 907 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 SAT2Q96F10 170 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 GRAMD2BQ96HH9 432 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 C3orf30Q96M34 536 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 SMC6Q96SB8 1091 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 CDX2Q99626 313 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 MXD3Q9BW11 206 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 C17orf75Q9HAS0 396 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 MMP25Q9NPA2 562 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 C1RLQ9NZP8 487 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 CWC15Q9P013 229 aaKnown RBP3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 OR14J1Q9UGF5 321 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 SIX4Q9UIU6 781 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 KCNS2Q9ULS6 477 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 SCN11AQ9UI33 1791 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 CCDC88AQ3V6T2 1871 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 TRPM7Q96QT4 1865 aa3.24□□□□□ -1.89
HMGB3P12-201ENST00000438745 TAF1LQ8IZX4 1826 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 GREB1LQ9C091 1923 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 AGAP14A8MT82 685 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 A8MV72 311 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 A8MZ25 164 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 M0QZ24 198 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 LINC01565O15544 149 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 HCRTR2O43614 444 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 GPC4O75487 556 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 TSPAN9O75954 239 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 SRPRAP08240 638 aaKnown RBP3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 CSH1P0DML2 217 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 CSH2P0DML3 217 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 AMD1P17707 334 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 TCEA1P23193 301 aaKnown RBP3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 ANOS1P23352 680 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 DGKAP23743 735 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 ACSL1P33121 698 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 PSMC6P62333 389 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 FOXM1Q08050 763 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 PNLIPRP3Q17RR3 467 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 KCNT1Q5JUK3 1230 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 ZNF280DQ6N043 979 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 TMPRSS12Q86WS5 348 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 ZBTB8BQ8NAP8 495 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 HM13Q8TCT9 377 aa3.23□□□□□ -1.89
HMGB3P12-201ENST00000438745 CD99L2Q8TCZ2 262 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms