RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 ASCL2Q99929 193 aa3.59□□□□□ -1.83
HMGB1P12-201ENST00000438594 MESP1Q9BRJ9 268 aa3.59□□□□□ -1.83
HMGB1P12-201ENST00000438594 PAAF1Q9BRP4 392 aa3.59□□□□□ -1.83
HMGB1P12-201ENST00000438594 INPP5KQ9BT40 448 aa3.59□□□□□ -1.83
HMGB1P12-201ENST00000438594 TRIM62Q9BVG3 475 aa3.59□□□□□ -1.83
HMGB1P12-201ENST00000438594 ZNF416Q9BWM5 594 aa3.59□□□□□ -1.83
HMGB1P12-201ENST00000438594 ENKD1Q9H0I2 346 aa3.59□□□□□ -1.83
HMGB1P12-201ENST00000438594 GPR35Q9HC97 309 aa3.59□□□□□ -1.83
HMGB1P12-201ENST00000438594 MED4Q9NPJ6 270 aa3.59□□□□□ -1.83
HMGB1P12-201ENST00000438594 SETD4Q9NVD3 440 aa3.59□□□□□ -1.83
HMGB1P12-201ENST00000438594 PANK4Q9NVE7 773 aa3.59□□□□□ -1.83
HMGB1P12-201ENST00000438594 RLIMQ9NVW2 624 aa3.59□□□□□ -1.83
HMGB1P12-201ENST00000438594 HYPKQ9NX55 129 aa3.59□□□□□ -1.83
HMGB1P12-201ENST00000438594 KCNN3Q9UGI6 736 aa3.59□□□□□ -1.83
HMGB1P12-201ENST00000438594 CHRNA9Q9UGM1 479 aa3.59□□□□□ -1.83
HMGB1P12-201ENST00000438594 FBXW11Q9UKB1 542 aa3.59□□□□□ -1.83
HMGB1P12-201ENST00000438594 GAB2Q9UQC2 676 aa3.59□□□□□ -1.83
HMGB1P12-201ENST00000438594 KCNK6Q9Y257 313 aa3.59□□□□□ -1.83
HMGB1P12-201ENST00000438594 MRPS7Q9Y2R9 242 aaKnown RBP3.59□□□□□ -1.83
HMGB1P12-201ENST00000438594 CHST2Q9Y4C5 530 aa3.59□□□□□ -1.83
HMGB1P12-201ENST00000438594 CDY1Q9Y6F8 540 aa3.59□□□□□ -1.83
HMGB1P12-201ENST00000438594 A0A075B6Q4 140 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 YDJCA8MPS7 323 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 H0YHG0 523 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 PRRG1O14668 218 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 XPO1O14980 1071 aaKnown RBP3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 TTI1O43156 1089 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 LRRTM2O43300 516 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 TLX2O43763 284 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 KRT86O43790 486 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 EXTL3O43909 919 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 HS6ST1O60243 411 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 SELENOFO60613 162 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 TSPAN1O60635 241 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 CBFA2T3O75081 653 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 DNAJB6O75190 326 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 KLHL2O95198 593 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 TRUB2O95900 331 aaKnown RBP3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 BCL10O95999 233 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 GH1P01241 217 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 RLN1P04808 185 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 YES1P07947 543 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 CHRM2P08172 466 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 SRPRAP08240 638 aaKnown RBP3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 OR52Z1P0C646 297 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 PRKAR1AP10644 381 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 CLUP10909 449 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 DRD5P21918 477 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 CYP2F1P24903 491 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 MGAT1P26572 445 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 OTX2P32243 289 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 RPL9P32969 192 aaKnown RBP3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 SERPINB6P35237 376 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 ME1P48163 572 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 NDUFV1P49821 464 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 ARSFP54793 590 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 ATP5IP56385 69 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 PTENP60484 403 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 UBE2IP63279 158 aaKnown RBP3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 GSTO1P78417 241 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 BLOC1S1P78537 153 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 RESTQ13127 1097 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 XRCC4Q13426 336 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 GSTA3Q16772 222 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 UGP2Q16851 508 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 USH1GQ495M9 461 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 PABPC1LQ4VXU2 614 aaKnown RBP3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 IFI44LQ53G44 452 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 C19orf54Q5BKX5 351 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 ZNF569Q5MCW4 686 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 GCNT6Q5T4J0 391 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 ARMC12Q5T9G4 340 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 C8orf74Q6P047 294 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 PMF1Q6P1K2 205 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 SLC27A1Q6PCB7 646 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 TMEM88Q6PEY1 159 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 ARSKQ6UWY0 536 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 KIAA1324Q6UXG2 1013 aaKnown RBP3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 KDM7AQ6ZMT4 941 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 DOK3Q7L591 496 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 USP37Q86T82 979 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 RTN4RL2Q86UN3 420 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 EXOC3L1Q86VI1 746 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 TPRA1Q86W33 373 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 TIGD4Q8IY51 512 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 RNF10Q8N5U6 811 aaKnown RBP3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 SETD9Q8NE22 299 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 C17orf47Q8NEP4 570 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 BBS1Q8NFJ9 593 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 CMASQ8NFW8 434 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 OR52J3Q8NH60 311 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 CLHC1Q8NHS4 586 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 CFAP61Q8NHU2 1237 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 POC1BQ8TC44 478 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 ABHD5Q8WTS1 349 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 CASKIN2Q8WXE0 1202 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 LPGAT1Q92604 370 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 PPP2R3CQ969Q6 453 aa3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 SNRNP40Q96DI7 357 aaKnown RBP3.58□□□□□ -1.84
HMGB1P12-201ENST00000438594 REXO5Q96IC2 774 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms