RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 ZMAT2Q96NC0 199 aaKnown RBP3.51□□□□□ -1.85
TRAPPC13-204ENST00000438419 DGAT2Q96PD7 388 aa3.51□□□□□ -1.85
TRAPPC13-204ENST00000438419 POLR3CQ9BUI4 534 aaPredicted RBP3.51□□□□□ -1.85
TRAPPC13-204ENST00000438419 MRPL1Q9BYD6 325 aaKnown RBP3.51□□□□□ -1.85
TRAPPC13-204ENST00000438419 SPATC1LQ9H0A9 340 aa3.51□□□□□ -1.85
TRAPPC13-204ENST00000438419 RABEP2Q9H5N1 569 aa3.51□□□□□ -1.85
TRAPPC13-204ENST00000438419 BCCIPQ9P287 314 aaKnown RBP eCLIP3.51□□□□□ -1.85
TRAPPC13-204ENST00000438419 ZHX1Q9UKY1 873 aaPredicted RBP3.51□□□□□ -1.85
TRAPPC13-204ENST00000438419 ZNF148Q9UQR1 794 aa3.51□□□□□ -1.85
TRAPPC13-204ENST00000438419 PCDHGA5Q9Y5G8 931 aa3.51□□□□□ -1.85
TRAPPC13-204ENST00000438419 OR2M5A3KFT3 312 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 H7C0S8 307 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 PLK4O00444 970 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 DVL1O14640 695 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 DIAPH2O60879 1101 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 PSMD10O75832 226 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 CSPG5O95196 566 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 BMP10O95393 424 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 GGPS1O95749 300 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 IGHV4-39P01824 125 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 ATP1A1P05023 1023 aaKnown RBP3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 TPOP07202 933 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 CSF2RAP15509 400 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 MCCP23508 829 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 NMBRP28336 390 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 DVL1P1P54792 670 aaPredicted RBP3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 SNRPEP62304 92 aaKnown RBP3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 SIRPAP78324 504 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 RPL24P83731 157 aaKnown RBP3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 BAATQ14032 418 aaPredicted RBP3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 KYNUQ16719 465 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 LETM2Q2VYF4 491 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 C1orf141Q5JVX7 400 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 SIRPB2Q5JXA9 342 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 PACS1Q6VY07 963 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 PLPPR4Q7Z2D5 763 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 HAUS6Q7Z4H7 955 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 NFE4Q86UQ8 179 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 NR2C2APQ86WQ0 139 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 GBGT1Q8N5D6 347 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 LMNTD1Q8N9Z9 388 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 KBTBD3Q8NAB2 608 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 DMBX1Q8NFW5 382 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 PTPMT1Q8WUK0 201 aaPredicted RBP3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 ZNF622Q969S3 477 aaKnown RBP eCLIP3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 PGAP3Q96FM1 320 aaPredicted RBP3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 OXNAD1Q96HP4 312 aaPredicted RBP3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 ZNF583Q96ND8 569 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 SLC22A12Q96S37 553 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 DENND2DQ9H6A0 471 aaPredicted RBP3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 CHMP1AQ9HD42 196 aaPredicted RBP3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 ZCCHC17Q9NP64 241 aaKnown RBP3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 HACL1Q9UJ83 578 aa3.5□□□□□ -1.85
TRAPPC13-204ENST00000438419 IGLV5-45A0A087WSX0 123 aa3.49□□□□□ -1.85
TRAPPC13-204ENST00000438419 A0A0G2JNG1 304 aa3.49□□□□□ -1.85
TRAPPC13-204ENST00000438419 FAM172BPA6NC97 362 aa3.49□□□□□ -1.85
TRAPPC13-204ENST00000438419 BMPR1BO00238 502 aa3.49□□□□□ -1.85
TRAPPC13-204ENST00000438419 WISP2O76076 250 aa3.49□□□□□ -1.85
TRAPPC13-204ENST00000438419 CRYAAP02489 173 aa3.49□□□□□ -1.85
TRAPPC13-204ENST00000438419 SNTB1Q13884 538 aaKnown RBP3.49□□□□□ -1.85
TRAPPC13-204ENST00000438419 KIR2DS5Q14953 304 aa3.49□□□□□ -1.85
TRAPPC13-204ENST00000438419 FAM98BQ52LJ0 330 aaKnown RBP3.49□□□□□ -1.85
TRAPPC13-204ENST00000438419 ASPRV1Q53RT3 343 aa3.49□□□□□ -1.85
TRAPPC13-204ENST00000438419 CCNYL2Q5T2Q4 361 aa3.49□□□□□ -1.85
TRAPPC13-204ENST00000438419 DHRS7BQ6IAN0 325 aaPredicted RBP3.49□□□□□ -1.85
TRAPPC13-204ENST00000438419 ZNF852Q6ZMS4 543 aa3.49□□□□□ -1.85
TRAPPC13-204ENST00000438419 LONP2Q86WA8 852 aa3.49□□□□□ -1.85
TRAPPC13-204ENST00000438419 GUF1Q8N442 669 aaKnown RBP3.49□□□□□ -1.85
TRAPPC13-204ENST00000438419 OR6J1Q8NGC5 347 aa3.49□□□□□ -1.85
TRAPPC13-204ENST00000438419 LPGAT1Q92604 370 aa3.49□□□□□ -1.85
TRAPPC13-204ENST00000438419 VPS33AQ96AX1 596 aa3.49□□□□□ -1.85
TRAPPC13-204ENST00000438419 SCRN2Q96FV2 425 aa3.49□□□□□ -1.85
TRAPPC13-204ENST00000438419 EPYCQ99645 322 aa3.49□□□□□ -1.85
TRAPPC13-204ENST00000438419 SEMA6AQ9H2E6 1030 aa3.49□□□□□ -1.85
TRAPPC13-204ENST00000438419 MMP27Q9H306 513 aa3.49□□□□□ -1.85
TRAPPC13-204ENST00000438419 KCNK15Q9H427 330 aa3.49□□□□□ -1.85
TRAPPC13-204ENST00000438419 LARSQ9P2J5 1176 aaKnown RBP3.49□□□□□ -1.85
TRAPPC13-204ENST00000438419 WDR35Q9P2L0 1181 aa3.49□□□□□ -1.85
TRAPPC13-204ENST00000438419 A0A087WYN8 130 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 GPR75-ASB3A0A0A6YYF3 556 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 A0A1W2PRQ8 180 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 URADA6NGE7 173 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 H0YIN7 160 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 XPNPEP2O43895 674 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 FGF17O60258 216 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 GPR137BO60478 399 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 TBX10O75333 385 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 TADA2AO75478 443 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 ZNF432O94892 652 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 LDLRP01130 860 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 TFAP2AP05549 437 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 MYBL1P10243 752 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 GJA1P17302 382 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 CPT2P23786 658 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 DNASE1P24855 282 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 EEF1DP29692 281 aaKnown RBP3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 MMP15P51511 669 aa3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 POU5F1Q01860 360 aaKnown RBP3.48□□□□□ -1.85
TRAPPC13-204ENST00000438419 ARL16Q0P5N6 197 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms