RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 XPAP23025 273 aaPredicted RBP25.26■■□□□ 1.63
CPNE1-216ENST00000437340 AOAHP28039 575 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 CCR7P32248 378 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 DPP6P42658 865 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 CEACAM7Q14002 265 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 TAF11Q15544 211 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 PHKG1Q16816 387 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 FAM78AQ5JUQ0 283 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 KBTBD6Q86V97 674 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 C12orf40Q86WS4 652 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 NPAS3Q8IXF0 933 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 OR9I1Q8NGQ6 314 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 TSPEARQ8WU66 669 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 SMARCD2Q92925 531 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 DCUN1D1Q96GG9 259 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 EGFL8Q99944 293 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 APOL5Q9BWW9 433 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 CD244Q9BZW8 370 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 DZANK1Q9NVP4 752 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 NMRK1Q9NWW6 199 aa25.26■■□□□ 1.63
CPNE1-216ENST00000437340 C16orf96A6NNT2 1141 aa25.25■■□□□ 1.63
CPNE1-216ENST00000437340 OR7A17O14581 309 aa25.25■■□□□ 1.63
CPNE1-216ENST00000437340 MRASO14807 208 aa25.25■■□□□ 1.63
CPNE1-216ENST00000437340 AP2A2O94973 939 aa25.25■■□□□ 1.63
CPNE1-216ENST00000437340 GUCA1CO95843 209 aa25.25■■□□□ 1.63
CPNE1-216ENST00000437340 ENO2P09104 434 aaPredicted RBP25.25■■□□□ 1.63
CPNE1-216ENST00000437340 LETMD1Q6P1Q0 360 aa25.25■■□□□ 1.63
CPNE1-216ENST00000437340 CDYL2Q8N8U2 506 aa25.25■■□□□ 1.63
CPNE1-216ENST00000437340 PCYOX1LQ8NBM8 494 aa25.25■■□□□ 1.63
CPNE1-216ENST00000437340 METTL6Q8TCB7 284 aa25.25■■□□□ 1.63
CPNE1-216ENST00000437340 DLG3Q92796 817 aa25.25■■□□□ 1.63
CPNE1-216ENST00000437340 ROPN1LQ96C74 230 aa25.25■■□□□ 1.63
CPNE1-216ENST00000437340 ZSCAN5AQ9BUG6 496 aa25.25■■□□□ 1.63
CPNE1-216ENST00000437340 TMEM45AQ9NWC5 275 aa25.25■■□□□ 1.63
CPNE1-216ENST00000437340 CD84Q9UIB8 345 aa25.25■■□□□ 1.63
CPNE1-216ENST00000437340 PPM1HQ9ULR3 514 aa25.25■■□□□ 1.63
CPNE1-216ENST00000437340 GPR45Q9Y5Y3 372 aa25.25■■□□□ 1.63
CPNE1-216ENST00000437340 KPNA5O15131 536 aa25.24■■□□□ 1.63
CPNE1-216ENST00000437340 NUAK1O60285 661 aa25.24■■□□□ 1.63
CPNE1-216ENST00000437340 RPS6KA2Q15349 733 aa25.24■■□□□ 1.63
CPNE1-216ENST00000437340 MUM1Q2TAK8 710 aa25.24■■□□□ 1.63
CPNE1-216ENST00000437340 C18orf21Q32NC0 220 aaPredicted RBP25.24■■□□□ 1.63
CPNE1-216ENST00000437340 PLEKHS1Q5SXH7 462 aa25.24■■□□□ 1.63
CPNE1-216ENST00000437340 RARS2Q5T160 578 aaKnown RBP25.24■■□□□ 1.63
CPNE1-216ENST00000437340 HENMT1Q5T8I9 393 aaKnown RBP25.24■■□□□ 1.63
CPNE1-216ENST00000437340 RAVER1Q8IY67 606 aaKnown RBP25.24■■□□□ 1.63
CPNE1-216ENST00000437340 DNAJC9Q8WXX5 260 aa25.24■■□□□ 1.63
CPNE1-216ENST00000437340 IPPKQ9H8X2 491 aa25.24■■□□□ 1.63
CPNE1-216ENST00000437340 AIG1Q9NVV5 245 aa25.24■■□□□ 1.63
CPNE1-216ENST00000437340 OBP2AQ9NY56 170 aa25.24■■□□□ 1.63
CPNE1-216ENST00000437340 WWOXQ9NZC7 414 aa25.24■■□□□ 1.63
CPNE1-216ENST00000437340 GIMAP2Q9UG22 337 aa25.24■■□□□ 1.63
CPNE1-216ENST00000437340 NDUFAF1Q9Y375 327 aa25.24■■□□□ 1.63
CPNE1-216ENST00000437340 PIKFYVEQ9Y2I7 2098 aa25.24■■□□□ 1.63
CPNE1-216ENST00000437340 TRIM38O00635 465 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 MPC1LP0DKB6 136 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 AKT1P31749 480 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 HSPA7P48741 367 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 CDKL1Q00532 357 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 RALGDSQ12967 914 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 COQ5Q5HYK3 327 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 ERAP2Q6P179 960 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 C8orf82Q6P1X6 216 aaPredicted RBP25.23■■□□□ 1.63
CPNE1-216ENST00000437340 Q6ZVL8 140 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 DDHD1Q8NEL9 900 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 PYDC1Q8WXC3 89 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 ATP6V1E2Q96A05 226 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 ZNF570Q96NI8 536 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 TMEM79Q9BSE2 394 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 OPTCQ9UBM4 332 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 C8GP07360 202 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 CAPN1P07384 714 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 ACADSP16219 412 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 FSHRP23945 695 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 MMP12P39900 470 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 GTF2A1P52655 376 aaPredicted RBP25.23■■□□□ 1.63
CPNE1-216ENST00000437340 ERVK-8P63133 956 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 TRAF3Q13114 568 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 EIF4HQ15056 248 aaKnown RBP25.23■■□□□ 1.63
CPNE1-216ENST00000437340 RNF165Q6ZSG1 346 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 OR4F6Q8NGB9 312 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 SCAMP4Q969E2 229 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 NAF1Q96HR8 494 aaKnown RBP25.23■■□□□ 1.63
CPNE1-216ENST00000437340 ACOX2Q99424 681 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 BRINP2Q9C0B6 783 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 ABCG8Q9H221 673 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 MTG2Q9H4K7 406 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 SPAG4Q9NPE6 437 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 CROTQ9UKG9 612 aa25.23■■□□□ 1.63
CPNE1-216ENST00000437340 K7EPI3 171 aa25.22■■□□□ 1.63
CPNE1-216ENST00000437340 PSMD11O00231 422 aa25.22■■□□□ 1.63
CPNE1-216ENST00000437340 QSOX1O00391 747 aa25.22■■□□□ 1.63
CPNE1-216ENST00000437340 MAP3K7O43318 606 aa25.22■■□□□ 1.63
CPNE1-216ENST00000437340 BAG2O95816 211 aa25.22■■□□□ 1.63
CPNE1-216ENST00000437340 PRNPP04156 253 aa25.22■■□□□ 1.63
CPNE1-216ENST00000437340 ANXA5P08758 320 aa25.22■■□□□ 1.63
CPNE1-216ENST00000437340 XRCC1P18887 633 aaPredicted RBP25.22■■□□□ 1.63
CPNE1-216ENST00000437340 MSH3P20585 1137 aa25.22■■□□□ 1.63
CPNE1-216ENST00000437340 ETV3P41162 512 aa25.22■■□□□ 1.63
CPNE1-216ENST00000437340 PIK3CGP48736 1102 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms