RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 CORO1CQ9ULV4 474 aaPredicted RBP6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 INVSQ9Y283 1065 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 PRKAB1Q9Y478 270 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 ACTL7BQ9Y614 415 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 OAS3Q9Y6K5 1087 aaKnown RBP6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 UNC80Q8N2C7 3258 aa6.94□□□□□ -1.3
LSM3P3-201ENST00000436601 A0A096LPK6 155 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 PRMT5O14744 637 aaPredicted RBP6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 TYROBPO43914 113 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 DNAJC6O75061 913 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 NIPSNAP2O75323 286 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 SPAG7O75391 227 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 SLC25A14O95258 325 aaPredicted RBP6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 TOP3BO95985 862 aaKnown RBP6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 MPOP05164 745 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 SLC35E2BP0CK96 405 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 TDGF1P13385 188 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 ATP1B2P14415 290 aaPredicted RBP6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 STMN1P16949 149 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 TEAD1P28347 426 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 CRABP2P29373 138 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 TYK2P29597 1187 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 HOXA6P31267 233 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 IGFALSP35858 605 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 TRIM23P36406 574 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 PPARGP37231 505 aaPredicted RBP6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 NSG1P42857 185 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 CCR5P51681 352 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 CLDN2P57739 230 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 RAB10P61026 200 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 CDK3Q00526 305 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 IRF9Q00978 393 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 PPARDQ03181 441 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 TMEM115Q12893 351 aaPredicted RBP6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 ZNF460Q14592 562 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 LDLRAP1Q5SW96 308 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 FAM45BPQ6NSW5 357 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 TSSK4Q6SA08 328 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 CDHR3Q6ZTQ4 885 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 DET1Q7L5Y6 550 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 ADGRG6Q86SQ4 1221 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 CLEC14AQ86T13 490 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 PIM3Q86V86 326 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 HEATR4Q86WZ0 1026 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 MAML2Q8IZL2 1156 aaPredicted RBP6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 CNPY4Q8N129 248 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 KRT222Q8N1A0 295 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 TMEM105Q8N8V8 129 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 GDAP1Q8TB36 358 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 FAM45AQ8TCE6 357 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 LKAAEAR1Q8TD35 194 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 ACMSDQ8TDX5 336 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 ANKRD49Q8WVL7 239 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 FAM136AQ96C01 138 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 BIRC7Q96CA5 298 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 SGF29Q96ES7 293 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 HIC2Q96JB3 615 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 BMFQ96LC9 184 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 SMC6Q96SB8 1091 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 ORAI3Q9BRQ5 295 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 GPR174Q9BXC1 333 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 C1QTNF1Q9BXJ1 281 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 CLPBQ9H078 707 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 VPS11Q9H270 941 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 C12orf65Q9H3J6 166 aaKnown RBP6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 TRIM39Q9HCM9 518 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 SSU72Q9NP77 194 aaKnown RBP6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 FZD3Q9NPG1 666 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 PCMTD2Q9NV79 361 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 SPATA6Q9NWH7 488 aaPredicted RBP6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 SENP1Q9P0U3 644 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 GDF2Q9UK05 429 aaPredicted RBP6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 TMEM98Q9Y2Y6 226 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 OR1A2Q9Y585 309 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 PCDHB1Q9Y5F3 818 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 COMMD10Q9Y6G5 202 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 MIA3Q5JRA6 1907 aa6.93□□□□□ -1.3
LSM3P3-201ENST00000436601 TMEM120BA0PK00 339 aa6.92□□□□□ -1.3
LSM3P3-201ENST00000436601 POM121BA6NF01 834 aa6.92□□□□□ -1.3
LSM3P3-201ENST00000436601 PRPF4O43172 522 aaKnown RBP eCLIP6.92□□□□□ -1.3
LSM3P3-201ENST00000436601 LILRB5O75023 590 aa6.92□□□□□ -1.3
LSM3P3-201ENST00000436601 RHOBTB1O94844 696 aa6.92□□□□□ -1.3
LSM3P3-201ENST00000436601 AP2A2O94973 939 aa6.92□□□□□ -1.3
LSM3P3-201ENST00000436601 FSBPO95073 299 aa6.92□□□□□ -1.3
LSM3P3-201ENST00000436601 TRIM16O95361 564 aa6.92□□□□□ -1.3
LSM3P3-201ENST00000436601 FUCA1P04066 466 aa6.92□□□□□ -1.3
LSM3P3-201ENST00000436601 PYGLP06737 847 aa6.92□□□□□ -1.3
LSM3P3-201ENST00000436601 ZNF8P17098 575 aaPredicted RBP6.92□□□□□ -1.3
LSM3P3-201ENST00000436601 ITGB6P18564 788 aa6.92□□□□□ -1.3
LSM3P3-201ENST00000436601 CHRM3P20309 590 aa6.92□□□□□ -1.3
LSM3P3-201ENST00000436601 NR1D1P20393 614 aa6.92□□□□□ -1.3
LSM3P3-201ENST00000436601 MSH3P20585 1137 aa6.92□□□□□ -1.3
LSM3P3-201ENST00000436601 CD9P21926 228 aa6.92□□□□□ -1.3
LSM3P3-201ENST00000436601 AKT1P31749 480 aa6.92□□□□□ -1.3
LSM3P3-201ENST00000436601 CCR7P32248 378 aa6.92□□□□□ -1.3
LSM3P3-201ENST00000436601 HPDP32754 393 aaPredicted RBP6.92□□□□□ -1.3
LSM3P3-201ENST00000436601 CRHR1P34998 444 aa6.92□□□□□ -1.3
LSM3P3-201ENST00000436601 RPA3P35244 121 aaPredicted RBP6.92□□□□□ -1.3
LSM3P3-201ENST00000436601 CLCN7P51798 805 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms