RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 PGDP52209 483 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 MPP3Q13368 585 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 UBAP2LQ14157 1087 aaKnown RBP7.59□□□□□ -1.19
VPS50-203ENST00000436177 PRPSAP1Q14558 356 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 NOMO1Q15155 1222 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 LLGL1Q15334 1064 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 CHRNA6Q15825 494 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 IGFBP7Q16270 282 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 RPE65Q16518 533 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 KHDC1Q4VXA5 237 aaKnown RBP7.59□□□□□ -1.19
VPS50-203ENST00000436177 TFDP3Q5H9I0 405 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 SIRPB2Q5JXA9 342 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 COLEC12Q5KU26 742 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 GPRC6AQ5T6X5 926 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 TCTN3Q6NUS6 607 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 ZNF449Q6P9G9 518 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 TMEM220Q6QAJ8 160 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 MFSD7Q6UXD7 560 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 SPOCD1Q6ZMY3 1216 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 DET1Q7L5Y6 550 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 PID1Q7Z2X4 250 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 ZC3H18Q86VM9 953 aaKnown RBP7.59□□□□□ -1.19
VPS50-203ENST00000436177 BPHLQ86WA6 291 aaPredicted RBP7.59□□□□□ -1.19
VPS50-203ENST00000436177 KMT5CQ86Y97 462 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 CNGA4Q8IV77 575 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 ZNF547Q8IVP9 402 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 DDHD1Q8NEL9 900 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 OR8K5Q8NH50 307 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 CT55Q8WUE5 264 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 KLHL6Q8WZ60 621 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 HAUS1Q96CS2 278 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 RBM41Q96IZ5 413 aaKnown RBP7.59□□□□□ -1.19
VPS50-203ENST00000436177 FCRL4Q96PJ5 515 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 QKIQ96PU8 341 aaKnown RBP eCLIP7.59□□□□□ -1.19
VPS50-203ENST00000436177 GPR87Q9BY21 358 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 ACTL8Q9H568 366 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 NHEJ1Q9H9Q4 299 aaPredicted RBP7.59□□□□□ -1.19
VPS50-203ENST00000436177 FGF21Q9NSA1 209 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 ABHD10Q9NUJ1 306 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 ANKMY1Q9P2S6 941 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 SAE1Q9UBE0 346 aaPredicted RBP7.59□□□□□ -1.19
VPS50-203ENST00000436177 TRHDEQ9UKU6 1024 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 INTUQ9ULD6 942 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 HYOU1Q9Y4L1 999 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 HEBP2Q9Y5Z4 205 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 COLEC10Q9Y6Z7 277 aa7.59□□□□□ -1.19
VPS50-203ENST00000436177 COL12A1Q99715 3063 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 OR5K3A6NET4 321 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 TTLL8A6PVC2 850 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 HACD1B0YJ81 288 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 MATN2O00339 956 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 IFRD1O00458 451 aaPredicted RBP7.58□□□□□ -1.2
VPS50-203ENST00000436177 AURKAO14965 403 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 BUD23O43709 281 aaKnown RBP7.58□□□□□ -1.2
VPS50-203ENST00000436177 UGT1A9O60656 530 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 VPS4BO75351 444 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 SCRG1O75711 98 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 ZRANB2O95218 330 aaKnown RBP eCLIP7.58□□□□□ -1.2
VPS50-203ENST00000436177 IPO7O95373 1038 aaKnown RBP7.58□□□□□ -1.2
VPS50-203ENST00000436177 ZBTB11O95625 1053 aaPredicted RBP7.58□□□□□ -1.2
VPS50-203ENST00000436177 KLK3P07288 261 aaPredicted RBP7.58□□□□□ -1.2
VPS50-203ENST00000436177 EBLN1P0CF75 366 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 PECAM1P16284 738 aaPredicted RBP7.58□□□□□ -1.2
VPS50-203ENST00000436177 UGT1A6P19224 532 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 CDH3P22223 829 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 UGT1A1P22309 533 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 UGT1A4P22310 534 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 NDUFS1P28331 727 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 CETN2P41208 172 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 CHRNA4P43681 627 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 CTSCP53634 463 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 GEMP55040 296 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 TUBB4BP68371 445 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 HSD11B2P80365 405 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 DMPKQ09013 629 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 TUBB2AQ13885 445 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 NFE2L1Q14494 772 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 KCNAB1Q14722 419 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 SPA17Q15506 151 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 SLC1A5Q15758 541 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 PWWP2BQ6NUJ5 590 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 KDELC1Q6UW63 502 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 HOOK3Q86VS8 718 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 CDKL3Q8IVW4 592 aaPredicted RBP7.58□□□□□ -1.2
VPS50-203ENST00000436177 VSTM4Q8IW00 320 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 ZNF567Q8N184 647 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 CARFQ8N187 725 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 RASGEF1AQ8N9B8 481 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 GPR150Q8NGU9 434 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 DTX3LQ8TDB6 740 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 THAP4Q8WY91 577 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 N4BP2L2Q92802 583 aaPredicted RBP7.58□□□□□ -1.2
VPS50-203ENST00000436177 MR1Q95460 341 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 TADA1Q96BN2 335 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 ULK4Q96C45 1275 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 SLC41A2Q96JW4 573 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 C12orf66Q96MD2 445 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 PPP1R2P1Q96PQ5 205 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 FCRL5Q96RD9 977 aa7.58□□□□□ -1.2
VPS50-203ENST00000436177 TUBB2BQ9BVA1 445 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms