RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 XRCC4Q13426 336 aa9.21□□□□□ -0.94
CDC42-IT1-201ENST00000431803 ITGA9Q13797 1035 aa9.21□□□□□ -0.94
CDC42-IT1-201ENST00000431803 NFE2L1Q14494 772 aa9.21□□□□□ -0.94
CDC42-IT1-201ENST00000431803 RPE65Q16518 533 aa9.21□□□□□ -0.94
CDC42-IT1-201ENST00000431803 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.21□□□□□ -0.94
CDC42-IT1-201ENST00000431803 CACHD1Q5VU97 1274 aa9.21□□□□□ -0.94
CDC42-IT1-201ENST00000431803 METRNLQ641Q3 311 aa9.21□□□□□ -0.94
CDC42-IT1-201ENST00000431803 SARM1Q6SZW1 724 aa9.21□□□□□ -0.94
CDC42-IT1-201ENST00000431803 C6orf15Q6UXA7 325 aaPredicted RBP9.21□□□□□ -0.94
CDC42-IT1-201ENST00000431803 FAM92BQ6ZTR7 304 aa9.21□□□□□ -0.94
CDC42-IT1-201ENST00000431803 CCDC50Q8IVM0 306 aa9.21□□□□□ -0.94
CDC42-IT1-201ENST00000431803 GALNT6Q8NCL4 622 aa9.21□□□□□ -0.94
CDC42-IT1-201ENST00000431803 APOBEC4Q8WW27 367 aaKnown RBP9.21□□□□□ -0.94
CDC42-IT1-201ENST00000431803 POM121Q96HA1 1249 aa9.21□□□□□ -0.94
CDC42-IT1-201ENST00000431803 SLC41A2Q96JW4 573 aa9.21□□□□□ -0.94
CDC42-IT1-201ENST00000431803 ZNF514Q96K75 400 aaPredicted RBP9.21□□□□□ -0.94
CDC42-IT1-201ENST00000431803 FSD1LQ9BXM9 530 aa9.21□□□□□ -0.94
CDC42-IT1-201ENST00000431803 TRIM10Q9UDY6 481 aa9.21□□□□□ -0.94
CDC42-IT1-201ENST00000431803 RSPH14Q9UHP6 348 aa9.21□□□□□ -0.94
CDC42-IT1-201ENST00000431803 TFR2Q9UP52 801 aa9.21□□□□□ -0.94
CDC42-IT1-201ENST00000431803 PKP3Q9Y446 797 aa9.21□□□□□ -0.94
CDC42-IT1-201ENST00000431803 DNMT3AQ9Y6K1 912 aaPredicted RBP9.21□□□□□ -0.94
CDC42-IT1-201ENST00000431803 IGHV5-51A0A0C4DH38 117 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 KLHL33A6NCF5 533 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 OR2AG2A6NM03 316 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 SPAG6O75602 509 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 KIAA0754O94854 1291 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 PRAMEF1O95521 474 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 AGTP01019 485 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 MTHFD1P11586 935 aaKnown RBP9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 TCN2P20062 427 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 RBL1P28749 1068 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 CTNNA1P35221 906 aaKnown RBP9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 PTPN7P35236 360 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 ADRA1AP35348 466 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 DLSTP36957 453 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 TLE1Q04724 770 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 PTPRCAPQ14761 206 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 LONRF2Q1L5Z9 754 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 DEFB109BQ30KR1 87 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 ATP1A1-AS1Q5TC04 95 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 IRGCQ6NXR0 463 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 KLHL35Q6PF15 583 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 TMEM220Q6QAJ8 160 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 RANBP10Q6VN20 620 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 PTRH1Q86Y79 214 aaKnown RBP9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 CCDC170Q8IYT3 715 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 C9orf43Q8TAL5 461 aaPredicted RBP9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 UBXN4Q92575 508 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 STAMBPL1Q96FJ0 436 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 HEMGNQ9BXL5 484 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 CROTQ9UKG9 612 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 PSMD13Q9UNM6 376 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 EFR3BQ9Y2G0 817 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 KCTD3Q9Y597 815 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 PCDHGA6Q9Y5G7 932 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 PCDHA13Q9Y5I0 950 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 MRPS18BQ9Y676 258 aaKnown RBP9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 ARL5AQ9Y689 179 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 KCNMB2Q9Y691 235 aa9.2□□□□□ -0.94
CDC42-IT1-201ENST00000431803 CDC14CA4D256 554 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 C5orf60A6NFR6 353 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 MGAT4DA6NG13 374 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 TLCD2A6NGC4 264 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 AGAP14A8MT82 685 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 STX7O15400 261 aaKnown RBP9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 PJA2O43164 708 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 SGTAO43765 313 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 ANXA9O76027 345 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 SRP72O76094 671 aaKnown RBP9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 TIAF1O95411 115 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 FURINP09958 794 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 FOLR1P15328 257 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 LPOP22079 712 aaPredicted RBP9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 LORP23490 312 aaPredicted RBP9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 AKT1P31749 480 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 CASRP41180 1078 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 GEMP55040 296 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 XIAPP98170 497 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 OTUD4Q01804 1114 aaKnown RBP9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 MSLNQ13421 630 aaPredicted RBP9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 TUBB3Q13509 450 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 KCNAB1Q14722 419 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 TAF1AQ15573 450 aaPredicted RBP9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 BCL7AQ4VC05 210 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 OXLD1Q5BKU9 147 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 FNBP1LQ5T0N5 605 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 ITPRIPL1Q6GPH6 555 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 CYB5D1Q6P9G0 228 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 DAAM2Q86T65 1068 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 PPP1R3BQ86XI6 285 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 KMT5CQ86Y97 462 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 RASGRP3Q8IV61 690 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 KLHDC8BQ8IXV7 354 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 BEND7Q8N7W2 519 aaPredicted RBP9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 OR2L2Q8NH16 312 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 ACTL9Q8TC94 416 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 ZNF398Q8TD17 642 aa9.19□□□□□ -0.94
CDC42-IT1-201ENST00000431803 ZFPM2Q8WW38 1151 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms