RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 MIB2Q96AX9 1013 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 HMCESQ96FZ2 354 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 ERO1AQ96HE7 468 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 FAM84BQ96KN1 310 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 PRMT6Q96LA8 375 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 ZNF582Q96NG8 517 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 BTBD10Q9BSF8 475 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 TUBB2BQ9BVA1 445 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 WNT5BQ9H1J7 359 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 DPAGT1Q9H3H5 408 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 FZD8Q9H461 694 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 ABCF3Q9NUQ8 709 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 ARGLU1Q9NWB6 273 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 HIF1ANQ9NWT6 349 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 ZNF224Q9NZL3 707 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 DNAJB9Q9UBS3 223 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 SIX4Q9UIU6 781 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 MYO6Q9UM54 1294 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 DLGAP4Q9Y2H0 992 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 AMDHD2Q9Y303 409 aa3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 ZFP37Q9Y6Q3 630 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P27-201ENST00000431429 TOPBP1Q92547 1522 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 GRIN2BQ13224 1484 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 A0A0B4J293 547 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 PRSS51A0A1B0GVH4 220 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 CAMTA2O94983 1202 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 OAZ2O95190 189 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 PMS2P2O95744 297 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 LDLRP01130 860 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 ZFYP08048 801 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 OR52Z1P0C646 297 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 OR2T7P0C7T2 308 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 FDPSP14324 419 aaKnown RBP3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 ADRA2CP18825 462 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 HOXA11P31270 313 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 GABRA5P31644 462 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 CTNNA1P35221 906 aaKnown RBP3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 PCGF2P35227 344 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 NAGLUP54802 743 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 LINC00205P59089 165 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 SEC61A1P61619 476 aaKnown RBP3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 SLC20A2Q08357 652 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 DLG1Q12959 904 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 HSPB3Q12988 150 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 TNIP1Q15025 636 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 TYSND1Q2T9J0 566 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 ZRANB3Q5FWF4 1079 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 GCNT6Q5T4J0 391 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 C6orf163Q5TEZ5 329 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 ASB18Q6ZVZ8 466 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 ABI3BPQ7Z7G0 1075 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 FJX1Q86VR8 437 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 TMPRSS12Q86WS5 348 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 TMEM173Q86WV6 379 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 ZNF575Q86XF7 245 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 SLC20A1Q8WUM9 679 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 SLC38A5Q8WUX1 472 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 ROBO4Q8WZ75 1007 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 CORO2AQ92828 525 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 NXNL1Q96CM4 212 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 SPDL1Q96EA4 605 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 SIPA1Q96FS4 1042 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 JAKMIP1Q96N16 626 aaKnown RBP3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 SPAG5Q96R06 1193 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 EGFL8Q99944 293 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 MGME1Q9BQP7 344 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 MLPHQ9BV36 600 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 SF3B5Q9BWJ5 86 aaKnown RBP3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 RSPH9Q9H1X1 276 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 EBF2Q9HAK2 575 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 HHATLQ9HCP6 504 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 NPAP1Q9NZP6 1156 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 NFS1Q9Y697 457 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 HECW2Q9P2P5 1572 aa3.03□□□□□ -1.92
HMGB1P27-201ENST00000431429 ADGRL1O94910 1474 aa3.03□□□□□ -1.93
HMGB1P27-201ENST00000431429 TEX13DA0A0J9YY54 714 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 FAM90A10PA6NDY2 464 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 CD8B2A6NJW9 211 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 OR6C76A6NM76 312 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 ENO4A6NNW6 628 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 ANKRD66B4E2M5 251 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 H3BNX3 289 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 TMEM178BH3BS89 294 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 INO80B-WBP1J3KQ70 363 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 ZBTB43O43298 467 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 XRCC3O43542 346 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 BUD23O43709 281 aaKnown RBP3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 PPFIA2O75334 1257 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 WDPCPO95876 746 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 ATP5BP06576 529 aaKnown RBP3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 FAM106CPP0CH98 169 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 CASTP20810 708 aaKnown RBP3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 MPZP25189 248 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 CDC25CP30307 473 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 TCF7P36402 384 aaPredicted RBP3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 MTHFRP42898 656 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 PCYT1AP49585 367 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 ZNF81P51508 661 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 MMP15P51511 669 aa3.02□□□□□ -1.93
HMGB1P27-201ENST00000431429 POLR2LP62875 67 aaKnown RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms