RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 CASC4Q6P4E1 433 aa14.9□□□□□ -0.02
PTCD1-204ENST00000430982 CES3Q6UWW8 571 aa14.9□□□□□ -0.02
PTCD1-204ENST00000430982 ABRAXAS1Q6UWZ7 409 aa14.9□□□□□ -0.02
PTCD1-204ENST00000430982 WASH2PQ6VEQ5 465 aa14.9□□□□□ -0.02
PTCD1-204ENST00000430982 ATG14Q6ZNE5 492 aa14.9□□□□□ -0.02
PTCD1-204ENST00000430982 USP53Q70EK8 1073 aa14.9□□□□□ -0.02
PTCD1-204ENST00000430982 B3GNT8Q7Z7M8 397 aa14.9□□□□□ -0.02
PTCD1-204ENST00000430982 AVL9Q8NBF6 648 aa14.9□□□□□ -0.02
PTCD1-204ENST00000430982 MCUQ8NE86 351 aa14.9□□□□□ -0.02
PTCD1-204ENST00000430982 PEX13Q92968 403 aa14.9□□□□□ -0.02
PTCD1-204ENST00000430982 SH3KBP1Q96B97 665 aa14.9□□□□□ -0.02
PTCD1-204ENST00000430982 CXorf40BQ96DE9 158 aa14.9□□□□□ -0.02
PTCD1-204ENST00000430982 AHCYL2Q96HN2 611 aaKnown RBP14.9□□□□□ -0.02
PTCD1-204ENST00000430982 RUNDC3BQ96NL0 473 aa14.9□□□□□ -0.02
PTCD1-204ENST00000430982 CCNL2Q96S94 520 aaPredicted RBP14.9□□□□□ -0.02
PTCD1-204ENST00000430982 TTC1Q99614 292 aa14.9□□□□□ -0.02
PTCD1-204ENST00000430982 FOXP3Q9BZS1 431 aa14.9□□□□□ -0.02
PTCD1-204ENST00000430982 EPB41L5Q9HCM4 733 aa14.9□□□□□ -0.02
PTCD1-204ENST00000430982 WASH6PQ9NQA3 447 aa14.9□□□□□ -0.02
PTCD1-204ENST00000430982 RNF14Q9UBS8 474 aa14.9□□□□□ -0.02
PTCD1-204ENST00000430982 PCYOX1Q9UHG3 505 aa14.9□□□□□ -0.02
PTCD1-204ENST00000430982 PSMD13Q9UNM6 376 aa14.9□□□□□ -0.02
PTCD1-204ENST00000430982 UNC79Q9P2D8 2635 aa14.9□□□□□ -0.02
PTCD1-204ENST00000430982 NBPF19A0A087WUL8 3843 aa14.9□□□□□ -0.02
PTCD1-204ENST00000430982 KIF26BQ2KJY2 2108 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 IGHV1OR21-1A0A087WYE8 117 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 OR52A4PA6NMU1 304 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 CCDC188H7C350 402 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 POLBP06746 335 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 BRAFP15056 766 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 SLC19A1P41440 591 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 PTGIRP43119 386 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 PDX1P52945 283 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 UBE2IP63279 158 aaKnown RBP14.89□□□□□ -0.03
PTCD1-204ENST00000430982 DR1Q01658 176 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 ITIH4Q14624 930 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 CLCA4Q14CN2 919 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 LYPLAL1Q5VWZ2 237 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 FOXR1Q6PIV2 292 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 ZNF574Q6ZN55 896 aaPredicted RBP14.89□□□□□ -0.03
PTCD1-204ENST00000430982 PIM3Q86V86 326 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 CAND1Q86VP6 1230 aaKnown RBP14.89□□□□□ -0.03
PTCD1-204ENST00000430982 PPIL6Q8IXY8 311 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 CFAP206Q8IYR0 622 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 MPP5Q8N3R9 675 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 CLDN19Q8N6F1 224 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 OTUD6BQ8N6M0 293 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 OR2L2Q8NH16 312 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 SLCO2A1Q92959 643 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 LINC00615Q96LM1 132 aaPredicted RBP14.89□□□□□ -0.03
PTCD1-204ENST00000430982 TMEM74Q96NL1 305 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 SERPINB12Q96P63 405 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 NUDT22Q9BRQ3 303 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 KIFC1Q9BW19 673 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.89□□□□□ -0.03
PTCD1-204ENST00000430982 RDH14Q9HBH5 336 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 MRM3Q9HC36 420 aaKnown RBP14.89□□□□□ -0.03
PTCD1-204ENST00000430982 XAB2Q9HCS7 855 aaKnown RBP14.89□□□□□ -0.03
PTCD1-204ENST00000430982 TREX1Q9NSU2 369 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 CATSPERZQ9NTU4 200 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 SAMD15Q9P1V8 674 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 ZNF624Q9P2J8 865 aaPredicted RBP14.89□□□□□ -0.03
PTCD1-204ENST00000430982 ANAPC5Q9UJX4 755 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 ACSL6Q9UKU0 697 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 SOX13Q9UN79 622 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 WDR37Q9Y2I8 494 aa14.89□□□□□ -0.03
PTCD1-204ENST00000430982 ZNF106Q9H2Y7 1883 aaKnown RBP14.89□□□□□ -0.03
PTCD1-204ENST00000430982 KLHL33A6NCF5 533 aa14.88□□□□□ -0.03
PTCD1-204ENST00000430982 TMX2-CTNND1H3BSU7 103 aa14.88□□□□□ -0.03
PTCD1-204ENST00000430982 AGRPO00253 132 aa14.88□□□□□ -0.03
PTCD1-204ENST00000430982 DNALI1O14645 258 aaPredicted RBP14.88□□□□□ -0.03
PTCD1-204ENST00000430982 AP2A2O94973 939 aa14.88□□□□□ -0.03
PTCD1-204ENST00000430982 CPNE6O95741 557 aa14.88□□□□□ -0.03
PTCD1-204ENST00000430982 ITGB2P05107 769 aa14.88□□□□□ -0.03
PTCD1-204ENST00000430982 MLNP12872 115 aa14.88□□□□□ -0.03
PTCD1-204ENST00000430982 XRCC1P18887 633 aaPredicted RBP14.88□□□□□ -0.03
PTCD1-204ENST00000430982 CD1CP29017 333 aa14.88□□□□□ -0.03
PTCD1-204ENST00000430982 NSG1P42857 185 aa14.88□□□□□ -0.03
PTCD1-204ENST00000430982 GPLD1P80108 840 aa14.88□□□□□ -0.03
PTCD1-204ENST00000430982 AARS2Q5JTZ9 985 aaKnown RBP14.88□□□□□ -0.03
PTCD1-204ENST00000430982 PHF19Q5T6S3 580 aa14.88□□□□□ -0.03
PTCD1-204ENST00000430982 RNASEH2BQ5TBB1 312 aaKnown RBP14.88□□□□□ -0.03
PTCD1-204ENST00000430982 IZUMO3Q5VZ72 239 aa14.88□□□□□ -0.03
PTCD1-204ENST00000430982 METRNLQ641Q3 311 aa14.88□□□□□ -0.03
PTCD1-204ENST00000430982 CERS6Q6ZMG9 384 aa14.88□□□□□ -0.03
PTCD1-204ENST00000430982 SYDE1Q6ZW31 735 aaPredicted RBP14.88□□□□□ -0.03
PTCD1-204ENST00000430982 LDB1Q86U70 411 aaPredicted RBP14.88□□□□□ -0.03
PTCD1-204ENST00000430982 NAT8LQ8N9F0 302 aa14.88□□□□□ -0.03
PTCD1-204ENST00000430982 OR10G6Q8NH81 332 aa14.88□□□□□ -0.03
PTCD1-204ENST00000430982 HM13Q8TCT9 377 aa14.88□□□□□ -0.03
PTCD1-204ENST00000430982 MFSD3Q96ES6 412 aa14.88□□□□□ -0.03
PTCD1-204ENST00000430982 CCM2Q9BSQ5 444 aa14.88□□□□□ -0.03
PTCD1-204ENST00000430982 TBC1D10AQ9BXI6 508 aa14.88□□□□□ -0.03
PTCD1-204ENST00000430982 STRADBQ9C0K7 418 aa14.88□□□□□ -0.03
PTCD1-204ENST00000430982 WWP1Q9H0M0 922 aa14.88□□□□□ -0.03
PTCD1-204ENST00000430982 VPS37BQ9H9H4 285 aa14.88□□□□□ -0.03
PTCD1-204ENST00000430982 POT1Q9NUX5 634 aa14.88□□□□□ -0.03
PTCD1-204ENST00000430982 ANKMY1Q9P2S6 941 aa14.88□□□□□ -0.03
PTCD1-204ENST00000430982 ACSL5Q9ULC5 683 aa14.88□□□□□ -0.03
PTCD1-204ENST00000430982 PRSS21Q9Y6M0 314 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms