RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 NDNQ99608 321 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 PARD6BQ9BYG5 372 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 ITM2CQ9NQX7 267 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 CHST7Q9NS84 486 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 GDAP2Q9NXN4 497 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 A0A087X1B8 175 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 ZNF840PA6NDX5 716 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 NR5A2O00482 541 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 AKAP8O43823 692 aaKnown RBP7.13□□□□□ -1.27
CNOT4-206ENST00000428680 LEFTY1O75610 366 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 STK16O75716 305 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 SYNGR4O95473 234 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 FHP07954 510 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 LAMP2P13473 410 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 LTBRP36941 435 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 TMED10P49755 219 aaKnown RBP7.13□□□□□ -1.27
CNOT4-206ENST00000428680 AFF3P51826 1226 aaKnown RBP7.13□□□□□ -1.27
CNOT4-206ENST00000428680 DRG2P55039 364 aaKnown RBP7.13□□□□□ -1.27
CNOT4-206ENST00000428680 ERVFC1P60507 584 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 ZBTB17Q13105 803 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 DPYSL3Q14195 570 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 GPR33Q49SQ1 333 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 ARSHQ5FYA8 562 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 KIAA1161Q6NSJ0 714 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 DCP2Q8IU60 420 aaKnown RBP7.13□□□□□ -1.27
CNOT4-206ENST00000428680 KATNAL2Q8IYT4 538 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 OR52K2Q8NGK3 314 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 RNASE11Q8TAA1 199 aaKnown RBP7.13□□□□□ -1.27
CNOT4-206ENST00000428680 SMPDL3AQ92484 453 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 DUSP9Q99956 384 aaKnown RBP7.13□□□□□ -1.27
CNOT4-206ENST00000428680 ZNF717Q9BY31 904 aaPredicted RBP7.13□□□□□ -1.27
CNOT4-206ENST00000428680 CIB4A0PJX0 185 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 C2orf74A8MZ97 194 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 DDX3XO00571 662 aaKnown RBP eCLIP7.13□□□□□ -1.27
CNOT4-206ENST00000428680 RECQL5O94762 991 aaPredicted RBP7.13□□□□□ -1.27
CNOT4-206ENST00000428680 CSNK1EP49674 416 aaKnown RBP7.13□□□□□ -1.27
CNOT4-206ENST00000428680 SLC7A2P52569 658 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 MAPK12P53778 367 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 HYIQ5T013 277 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 POLNQ7Z5Q5 900 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 MFSD6LQ8IWD5 586 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 KIAA2013Q8IYS2 634 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 FUKQ8N0W3 1084 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 LINC01599Q8WXQ3 324 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 AZIN2Q96A70 460 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 ZNF599Q96NL3 588 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 DGAT2Q96PD7 388 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 CDADC1Q9BWV3 514 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 ACTR5Q9H9F9 607 aaPredicted RBP7.13□□□□□ -1.27
CNOT4-206ENST00000428680 ZC4H2Q9NQZ6 224 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 ADPRHL2Q9NX46 363 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 SLC39A1Q9NY26 324 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 OGFRQ9NZT2 677 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 MTF2Q9Y483 593 aaPredicted RBP7.13□□□□□ -1.27
CNOT4-206ENST00000428680 SNX10Q9Y5X0 201 aa7.13□□□□□ -1.27
CNOT4-206ENST00000428680 PPEF2O14830 753 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 UBDO15205 165 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 TRIM13O60858 407 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 AGTP01019 485 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 RETP07949 1114 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 SRPRAP08240 638 aaKnown RBP7.12□□□□□ -1.27
CNOT4-206ENST00000428680 CD63P08962 238 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 CCDC159P0C7I6 412 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 GNAZP19086 355 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 CCNA2P20248 432 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 CRADDP78560 199 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 ECM1Q16610 540 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 CDKN3Q16667 212 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 DUOXA1Q1HG43 343 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 MS4A13Q5J8X5 152 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 TMC3Q7Z5M5 1100 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 HEATR4Q86WZ0 1026 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 DENND6AQ8IWF6 608 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 RNF168Q8IYW5 571 aaPredicted RBP7.12□□□□□ -1.27
CNOT4-206ENST00000428680 FRS2Q8WU20 508 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 SORCS1Q8WY21 1168 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 GRAMD1AQ96CP6 724 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 MMABQ96EY8 250 aaPredicted RBP7.12□□□□□ -1.27
CNOT4-206ENST00000428680 TBATAQ96M53 351 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 PAFAH2Q99487 392 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 MIPEPQ99797 713 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 REXO4Q9GZR2 422 aaKnown RBP7.12□□□□□ -1.27
CNOT4-206ENST00000428680 NECTIN3Q9NQS3 549 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 SLC9A8Q9Y2E8 581 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 KLHL20Q9Y2M5 609 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 VWA7Q9Y334 891 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 MYO1CO00159 1063 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 ZNF185O15231 689 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 PAPSS1O43252 624 aaPredicted RBP7.12□□□□□ -1.27
CNOT4-206ENST00000428680 MTX2O75431 263 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 ARSAP15289 507 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 TSHRP16473 764 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 MMP8P22894 467 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 EEF1DP29692 281 aaKnown RBP7.12□□□□□ -1.27
CNOT4-206ENST00000428680 GRK6P43250 576 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 ARCN1P48444 511 aaKnown RBP7.12□□□□□ -1.27
CNOT4-206ENST00000428680 POLD2P49005 469 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 CLCN7P51798 805 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 CASP8Q14790 479 aa7.12□□□□□ -1.27
CNOT4-206ENST00000428680 DEFB133Q30KQ1 61 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms