RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.14■□□□□ 0.17
VARS-216ENST00000428445 KLHL8Q9P2G9 620 aaPredicted RBP16.14■□□□□ 0.17
VARS-216ENST00000428445 PCSK5Q92824 1860 aa16.14■□□□□ 0.17
VARS-216ENST00000428445 RP1L1Q8IWN7 2480 aaPredicted RBP16.13■□□□□ 0.17
VARS-216ENST00000428445 SPTBN1Q01082 2364 aaKnown RBP16.13■□□□□ 0.17
VARS-216ENST00000428445 TLCD2A6NGC4 264 aa16.13■□□□□ 0.17
VARS-216ENST00000428445 A6NL46 340 aa16.13■□□□□ 0.17
VARS-216ENST00000428445 AGFG2O95081 481 aa16.13■□□□□ 0.17
VARS-216ENST00000428445 RECKO95980 971 aa16.13■□□□□ 0.17
VARS-216ENST00000428445 ATXN8OSP0DMR3 200 aa16.13■□□□□ 0.17
VARS-216ENST00000428445 AKT1P31749 480 aa16.13■□□□□ 0.17
VARS-216ENST00000428445 NR2C2P49116 596 aa16.13■□□□□ 0.17
VARS-216ENST00000428445 PGDP52209 483 aa16.13■□□□□ 0.17
VARS-216ENST00000428445 TUBB4BP68371 445 aa16.13■□□□□ 0.17
VARS-216ENST00000428445 ABRQ12979 859 aa16.13■□□□□ 0.17
VARS-216ENST00000428445 TUBB2AQ13885 445 aa16.13■□□□□ 0.17
VARS-216ENST00000428445 PLEKHS1Q5SXH7 462 aa16.13■□□□□ 0.17
VARS-216ENST00000428445 SYVN1Q86TM6 617 aa16.13■□□□□ 0.17
VARS-216ENST00000428445 RHOT2Q8IXI1 618 aa16.13■□□□□ 0.17
VARS-216ENST00000428445 EFCAB3Q8N7B9 438 aa16.13■□□□□ 0.17
VARS-216ENST00000428445 ZNF398Q8TD17 642 aa16.13■□□□□ 0.17
VARS-216ENST00000428445 FCRL4Q96PJ5 515 aa16.13■□□□□ 0.17
VARS-216ENST00000428445 DNAJC7Q99615 494 aa16.13■□□□□ 0.17
VARS-216ENST00000428445 TUBB2BQ9BVA1 445 aa16.13■□□□□ 0.17
VARS-216ENST00000428445 KLHL25Q9H0H3 589 aa16.13■□□□□ 0.17
VARS-216ENST00000428445 TRABDQ9H4I3 376 aa16.13■□□□□ 0.17
VARS-216ENST00000428445 SLC24A2Q9UI40 661 aa16.13■□□□□ 0.17
VARS-216ENST00000428445 SLC9B1P1A6NJY1 282 aa16.12■□□□□ 0.17
VARS-216ENST00000428445 ZNF185O15231 689 aa16.12■□□□□ 0.17
VARS-216ENST00000428445 SGTAO43765 313 aa16.12■□□□□ 0.17
VARS-216ENST00000428445 CPNE3O75131 537 aaKnown RBP16.12■□□□□ 0.17
VARS-216ENST00000428445 MSH3P20585 1137 aa16.12■□□□□ 0.17
VARS-216ENST00000428445 SLC1A1P43005 524 aa16.12■□□□□ 0.17
VARS-216ENST00000428445 PDE1BQ01064 536 aa16.12■□□□□ 0.17
VARS-216ENST00000428445 FHL5Q5TD97 284 aa16.12■□□□□ 0.17
VARS-216ENST00000428445 ZDHHC20Q5W0Z9 365 aa16.12■□□□□ 0.17
VARS-216ENST00000428445 KLHL35Q6PF15 583 aa16.12■□□□□ 0.17
VARS-216ENST00000428445 SPOCD1Q6ZMY3 1216 aa16.12■□□□□ 0.17
VARS-216ENST00000428445 OOSP2Q86WS3 158 aa16.12■□□□□ 0.17
VARS-216ENST00000428445 CFAP206Q8IYR0 622 aa16.12■□□□□ 0.17
VARS-216ENST00000428445 ENDOVQ8N8Q3 282 aaKnown RBP16.12■□□□□ 0.17
VARS-216ENST00000428445 THAP4Q8WY91 577 aa16.12■□□□□ 0.17
VARS-216ENST00000428445 RMDN2Q96LZ7 410 aa16.12■□□□□ 0.17
VARS-216ENST00000428445 FCRL5Q96RD9 977 aa16.12■□□□□ 0.17
VARS-216ENST00000428445 APOL2Q9BQE5 337 aa16.12■□□□□ 0.17
VARS-216ENST00000428445 GORASP1Q9BQQ3 440 aa16.12■□□□□ 0.17
VARS-216ENST00000428445 FAM96AQ9H5X1 160 aa16.12■□□□□ 0.17
VARS-216ENST00000428445 NHEJ1Q9H9Q4 299 aaPredicted RBP16.12■□□□□ 0.17
VARS-216ENST00000428445 MLXIPLQ9NP71 852 aa16.12■□□□□ 0.17
VARS-216ENST00000428445 SOHLH2Q9NX45 425 aa16.12■□□□□ 0.17
VARS-216ENST00000428445 DDX56Q9NY93 547 aaKnown RBP16.12■□□□□ 0.17
VARS-216ENST00000428445 PLEKHB1Q9UF11 243 aaPredicted RBP16.12■□□□□ 0.17
VARS-216ENST00000428445 FKBPLQ9UIM3 349 aa16.12■□□□□ 0.17
VARS-216ENST00000428445 TFR2Q9UP52 801 aa16.12■□□□□ 0.17
VARS-216ENST00000428445 PKP3Q9Y446 797 aa16.12■□□□□ 0.17
VARS-216ENST00000428445 MAP4K5Q9Y4K4 846 aa16.12■□□□□ 0.17
VARS-216ENST00000428445 DNMT3AQ9Y6K1 912 aaPredicted RBP16.12■□□□□ 0.17
VARS-216ENST00000428445 PRRC2CQ9Y520 2896 aaKnown RBP16.11■□□□□ 0.17
VARS-216ENST00000428445 PIKFYVEQ9Y2I7 2098 aa16.11■□□□□ 0.17
VARS-216ENST00000428445 A1L4Q6 167 aa16.11■□□□□ 0.17
VARS-216ENST00000428445 MGAT4DA6NG13 374 aa16.11■□□□□ 0.17
VARS-216ENST00000428445 STX7O15400 261 aaKnown RBP16.11■□□□□ 0.17
VARS-216ENST00000428445 CBFA2T2O43439 604 aa16.11■□□□□ 0.17
VARS-216ENST00000428445 PRAMEF1O95521 474 aa16.11■□□□□ 0.17
VARS-216ENST00000428445 ZBTB11O95625 1053 aaPredicted RBP16.11■□□□□ 0.17
VARS-216ENST00000428445 EPOP01588 193 aa16.11■□□□□ 0.17
VARS-216ENST00000428445 PTMSP20962 102 aa16.11■□□□□ 0.17
VARS-216ENST00000428445 ITGA1P56199 1179 aa16.11■□□□□ 0.17
VARS-216ENST00000428445 TMPRSS15P98073 1019 aa16.11■□□□□ 0.17
VARS-216ENST00000428445 MRPL49Q13405 166 aaKnown RBP16.11■□□□□ 0.17
VARS-216ENST00000428445 RAPSNQ13702 412 aa16.11■□□□□ 0.17
VARS-216ENST00000428445 GSE1Q14687 1217 aa16.11■□□□□ 0.17
VARS-216ENST00000428445 TAZQ16635 292 aa16.11■□□□□ 0.17
VARS-216ENST00000428445 EIF2S3LQ2VIR3 472 aaKnown RBP16.11■□□□□ 0.17
VARS-216ENST00000428445 ARMC6Q6NXE6 501 aa16.11■□□□□ 0.17
VARS-216ENST00000428445 CYB5D1Q6P9G0 228 aa16.11■□□□□ 0.17
VARS-216ENST00000428445 ZNF517Q6ZMY9 492 aaPredicted RBP16.11■□□□□ 0.17
VARS-216ENST00000428445 BPHLQ86WA6 291 aaPredicted RBP16.11■□□□□ 0.17
VARS-216ENST00000428445 KMT5CQ86Y97 462 aa16.11■□□□□ 0.17
VARS-216ENST00000428445 GALNT11Q8NCW6 608 aa16.11■□□□□ 0.17
VARS-216ENST00000428445 FDCSPQ8NFU4 85 aa16.11■□□□□ 0.17
VARS-216ENST00000428445 OR4K2Q8NGD2 314 aa16.11■□□□□ 0.17
VARS-216ENST00000428445 OR2L2Q8NH16 312 aa16.11■□□□□ 0.17
VARS-216ENST00000428445 ADAMTS17Q8TE56 1095 aa16.11■□□□□ 0.17
VARS-216ENST00000428445 FICDQ9BVA6 458 aa16.11■□□□□ 0.17
VARS-216ENST00000428445 NUDT9Q9BW91 350 aa16.11■□□□□ 0.17
VARS-216ENST00000428445 ZCCHC2Q9C0B9 1178 aaKnown RBP16.11■□□□□ 0.17
VARS-216ENST00000428445 ASB8Q9H765 288 aa16.11■□□□□ 0.17
VARS-216ENST00000428445 SEC16AO15027 2179 aa16.11■□□□□ 0.17
VARS-216ENST00000428445 CACNA1DQ01668 2161 aa16.1■□□□□ 0.17
VARS-216ENST00000428445 MEN1O00255 615 aa16.1■□□□□ 0.17
VARS-216ENST00000428445 CCL22O00626 93 aa16.1■□□□□ 0.17
VARS-216ENST00000428445 SPOPO43791 374 aa16.1■□□□□ 0.17
VARS-216ENST00000428445 SORBS2O94875 1100 aaKnown RBP16.1■□□□□ 0.17
VARS-216ENST00000428445 CAPN1P07384 714 aa16.1■□□□□ 0.17
VARS-216ENST00000428445 LPOP22079 712 aaPredicted RBP16.1■□□□□ 0.17
VARS-216ENST00000428445 MARCKSL1P49006 195 aa16.1■□□□□ 0.17
VARS-216ENST00000428445 ITGA9Q13797 1035 aa16.1■□□□□ 0.17
VARS-216ENST00000428445 TCEAL1Q15170 157 aa16.1■□□□□ 0.17
VARS-216ENST00000428445 LONRF2Q1L5Z9 754 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms