RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 GTPBP1O00178 669 aaKnown RBP14.31□□□□□ -0.12
PTPRU-204ENST00000428026 CHST10O43529 356 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 ITM2AO43736 263 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 ORC5O43913 435 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 AP2A1O95782 977 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 IFNGP01579 166 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 XRCC1P18887 633 aaPredicted RBP14.31□□□□□ -0.12
PTPRU-204ENST00000428026 JAG1P78504 1218 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 LCP2Q13094 533 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 CRTC2Q53ET0 693 aaPredicted RBP14.31□□□□□ -0.12
PTPRU-204ENST00000428026 C9orf64Q5T6V5 341 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 ZNF697Q5TEC3 545 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 LYPLAL1Q5VWZ2 237 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.31□□□□□ -0.12
PTPRU-204ENST00000428026 C7orf43Q8WVR3 580 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 PIWIL1Q96J94 861 aaKnown RBP14.31□□□□□ -0.12
PTPRU-204ENST00000428026 SUCOQ9UBS9 1254 aaKnown RBP14.31□□□□□ -0.12
PTPRU-204ENST00000428026 RBM7Q9Y580 266 aaKnown RBP14.31□□□□□ -0.12
PTPRU-204ENST00000428026 DNAJA2O60884 412 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 UGT2B4P06133 528 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 UROSP10746 265 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 CD36P16671 472 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 GRM5P41594 1212 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 SRSF11Q05519 484 aaKnown RBP14.31□□□□□ -0.12
PTPRU-204ENST00000428026 DCST1Q5T197 706 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 PARGQ86W56 976 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 ROPN1LQ96C74 230 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 GAL3ST1Q99999 423 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 CARNS1A5YM72 827 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 KDM4BO94953 1096 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 CCNDBP1O95273 360 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 PDHA2P29803 388 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 OR1D2P34982 312 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 MAB21L3Q8N8X9 362 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 SUSD6Q92537 303 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 CLP1Q92989 425 aaKnown RBP14.31□□□□□ -0.12
PTPRU-204ENST00000428026 TMCO6Q96DC7 493 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 SCLYQ96I15 445 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 ZNF780BQ9Y6R6 833 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 MT-CYBP00156 380 aaPredicted RBP14.31□□□□□ -0.12
PTPRU-204ENST00000428026 IFNW1P05000 195 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 HDCP19113 662 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 ALDH3A2P51648 485 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 DCDC1P59894 354 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 DSC2Q02487 901 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 STRADAQ7RTN6 431 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 GALNTL5Q7Z4T8 443 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 HJURPQ8NCD3 748 aaPredicted RBP14.31□□□□□ -0.12
PTPRU-204ENST00000428026 GBA3Q9H227 469 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 MLXQ9UH92 298 aa14.31□□□□□ -0.12
PTPRU-204ENST00000428026 PRODHO43272 600 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 SCELO95171 688 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 CDH5P33151 784 aaPredicted RBP14.3□□□□□ -0.12
PTPRU-204ENST00000428026 CCR10P46092 362 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 AP2S1P53680 142 aaPredicted RBP14.3□□□□□ -0.12
PTPRU-204ENST00000428026 CD83Q01151 205 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 SH3D19Q5HYK7 790 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 POMZP3Q6PJE2 187 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 ZNF395Q9H8N7 513 aaPredicted RBP14.3□□□□□ -0.12
PTPRU-204ENST00000428026 ZDHHC18Q9NUE0 388 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 GMFGO60234 142 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 HCN1O60741 890 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 MYCLP1P12525 358 aaPredicted RBP14.3□□□□□ -0.12
PTPRU-204ENST00000428026 RPL9P32969 192 aaKnown RBP14.3□□□□□ -0.12
PTPRU-204ENST00000428026 SSR2P43308 183 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 C2orf80Q0P641 193 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 PPIGQ13427 754 aaKnown RBP eCLIP14.3□□□□□ -0.124e-7■■□□□ 14.3
PTPRU-204ENST00000428026 SVOPLQ8N434 492 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 EIF2B4Q9UI10 523 aaKnown RBP14.3□□□□□ -0.12
PTPRU-204ENST00000428026 MCIDASD6RGH6 385 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 PRMT5O14744 637 aaPredicted RBP14.3□□□□□ -0.12
PTPRU-204ENST00000428026 CPNE3O75131 537 aaKnown RBP14.3□□□□□ -0.12
PTPRU-204ENST00000428026 CHRNB2P17787 502 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 ACAP2Q15057 778 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 PLA2G4EQ3MJ16 856 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 IDNKQ5T6J7 187 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 USP43Q70EL4 1123 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 BSNDQ8WZ55 320 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 FERD3LQ96RJ6 166 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 OAZ3Q9UMX2 235 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 OR6C70A6NIJ9 312 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 LYPLA2O95372 231 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 C4BPAP04003 597 aaKnown RBP14.3□□□□□ -0.12
PTPRU-204ENST00000428026 SYN1P17600 705 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 HTRA3P83110 453 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 GHDCQ8N2G8 530 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 MAGEE1Q9HCI5 957 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 SOHLH2Q9NX45 425 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 MTRRQ9UBK8 725 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 PRELID1Q9Y255 219 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 PCDHA2Q9Y5H9 948 aa14.3□□□□□ -0.12
PTPRU-204ENST00000428026 TBC1D3BA6NDS4 549 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 TMEM63AO94886 807 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 TIE1P35590 1138 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 CASP9P55211 416 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 PPP1R8Q12972 351 aaKnown RBP14.29□□□□□ -0.12
PTPRU-204ENST00000428026 CANT1Q8WVQ1 401 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 MYOCQ99972 504 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 SLC39A3Q9BRY0 314 aa14.29□□□□□ -0.12
PTPRU-204ENST00000428026 SNX10Q9Y5X0 201 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms