RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 JMJD7P0C870 316 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 LIPCP11150 499 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 MTHFD1P11586 935 aaKnown RBP8.94□□□□□ -0.98
SMC1A-203ENST00000428014 PAMP19021 973 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 OGNP20774 298 aaKnown RBP8.94□□□□□ -0.98
SMC1A-203ENST00000428014 ATP5DP30049 168 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 CSTF2P33240 577 aaKnown RBP eCLIP8.94□□□□□ -0.98
SMC1A-203ENST00000428014 ABCG1P45844 678 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 MAPK9P45984 424 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 LMAN1P49257 510 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 OR1D5P58170 312 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 PRAMEP78395 509 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 MC2RQ01718 297 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 CFHR1Q03591 330 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 FRG1Q14331 258 aaKnown RBP8.94□□□□□ -0.98
SMC1A-203ENST00000428014 IL11RAQ14626 422 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 POU6F1Q14863 301 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 TYSND1Q2T9J0 566 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 BROXQ5VW32 411 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 ZNF534Q76KX8 674 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 B3GNT8Q7Z7M8 397 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 GALNT7Q86SF2 657 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 TRIM48Q8IWZ4 208 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 BMPERQ8N8U9 685 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 OR8K5Q8NH50 307 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 GABPB2Q8TAK5 448 aaPredicted RBP8.94□□□□□ -0.98
SMC1A-203ENST00000428014 PATE1Q8WXA2 126 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 KLHL6Q8WZ60 621 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 LRRC39Q96DD0 335 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 PANX3Q96QZ0 392 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 APOL2Q9BQE5 337 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 OR52A5Q9H2C5 316 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 ZNF768Q9H5H4 540 aaKnown RBP8.94□□□□□ -0.98
SMC1A-203ENST00000428014 CAAP1Q9H8G2 361 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 ENAMQ9NRM1 1142 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 POLG2Q9UHN1 485 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 ANAPC5Q9UJX4 755 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 ATXN7L1Q9ULK2 861 aaPredicted RBP8.94□□□□□ -0.98
SMC1A-203ENST00000428014 SOX13Q9UN79 622 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 PLEKHM1Q9Y4G2 1056 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 LOXL2Q9Y4K0 774 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 PCDHB3Q9Y5E6 796 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 PCDHB11Q9Y5F2 797 aa8.94□□□□□ -0.98
SMC1A-203ENST00000428014 WDFY3Q8IZQ1 3526 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 CACNA1GO43497 2377 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 BPTFQ12830 3046 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 TEX51A0A1B0GUA7 166 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 UBA6A0AVT1 1052 aaPredicted RBP8.93□□□□□ -0.98
SMC1A-203ENST00000428014 SLC5A10A0PJK1 596 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 OR2AG2A6NM03 316 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 EIF3FO00303 357 aaPredicted RBP8.93□□□□□ -0.98
SMC1A-203ENST00000428014 IFRD1O00458 451 aaPredicted RBP8.93□□□□□ -0.98
SMC1A-203ENST00000428014 PRMT5O14744 637 aaPredicted RBP8.93□□□□□ -0.98
SMC1A-203ENST00000428014 TLX3O43711 291 aaPredicted RBP8.93□□□□□ -0.98
SMC1A-203ENST00000428014 MTX2O75431 263 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 TNFSF15O95150 251 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 TTC4O95801 387 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 SLC4A1P02730 911 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 MPOP05164 745 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 MYF5P13349 255 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 CD9P21926 228 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 CXCR5P32302 372 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 CSF2RBP32927 897 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 BASP1P80723 227 aaKnown RBP8.93□□□□□ -0.98
SMC1A-203ENST00000428014 GUCA2AQ02747 115 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 TLE3Q04726 772 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 OLIG2Q13516 323 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 SPARCL1Q14515 664 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 CLCA4Q14CN2 919 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 RPE65Q16518 533 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 DBN1Q16643 649 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 FASTKD1Q53R41 847 aaKnown RBP8.93□□□□□ -0.98
SMC1A-203ENST00000428014 DNAJC21Q5F1R6 531 aaKnown RBP8.93□□□□□ -0.98
SMC1A-203ENST00000428014 C3orf38Q5JPI3 329 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 FNBP1LQ5T0N5 605 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 MRNIPQ6NTE8 343 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 CRTC3Q6UUV7 619 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 CEACAM20Q6UY09 585 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 PDZD3Q86UT5 571 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 PIANPQ8IYJ0 282 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 TBC1D21Q8IYX1 336 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 SLC35F6Q8N357 371 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 GLIS1Q8NBF1 620 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 ACVR1CQ8NER5 493 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 CALML6Q8TD86 181 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 KCNE4Q8WWG9 221 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 ASZ1Q8WWH4 475 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 SGF29Q96ES7 293 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 SLC41A2Q96JW4 573 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 C9orf72Q96LT7 481 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 NUDT22Q9BRQ3 303 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 EFHD1Q9BUP0 239 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 SPRY4Q9C004 299 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 PHACTR1Q9C0D0 580 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 OSGEPL1Q9H4B0 414 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 COG4Q9H9E3 785 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 EPB41L5Q9HCM4 733 aa8.93□□□□□ -0.98
SMC1A-203ENST00000428014 SIDT1Q9NXL6 827 aaKnown RBP8.93□□□□□ -0.98
SMC1A-203ENST00000428014 SCHIP1Q9P0W5 487 aaPredicted RBP8.93□□□□□ -0.98
SMC1A-203ENST00000428014 RAXQ9Y2V3 346 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms