RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 KCNJ11Q14654 390 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 TPSAB1Q15661 275 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 PGS1Q32NB8 556 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 PERM1Q5SV97 790 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 LYPLAL1Q5VWZ2 237 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 EFL1Q7Z2Z2 1120 aaKnown RBP10.51□□□□□ -0.73
TCOF1-204ENST00000427724 TREML1Q86YW5 311 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 LENG8Q96PV6 779 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-204ENST00000427724 FEM1AQ9BSK4 669 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 CCDC28BQ9BUN5 200 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 TRNAU1APQ9NX07 287 aaKnown RBP10.51□□□□□ -0.73
TCOF1-204ENST00000427724 XPR1Q9UBH6 696 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 MRPS33Q9Y291 106 aaKnown RBP10.51□□□□□ -0.73
TCOF1-204ENST00000427724 CACNA1HO95180 2353 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 RGSL1A5PLK6 1076 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 TMEM189-UBE2V1I3L0A0 370 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 BMP10O95393 424 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 CYP11A1P05108 521 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 KLK3P07288 261 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-204ENST00000427724 OXTRP30559 389 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 OC90Q02509 493 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-204ENST00000427724 AP5B1Q2VPB7 878 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 RAB6CQ53S08 254 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 C6orf52Q5T4I8 152 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 UBE2R2Q712K3 238 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-204ENST00000427724 ZNF598Q86UK7 904 aaKnown RBP10.51□□□□□ -0.73
TCOF1-204ENST00000427724 ZNF781Q8N8C0 355 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 UTP4Q969X6 686 aaKnown RBP10.51□□□□□ -0.73
TCOF1-204ENST00000427724 TOE1Q96GM8 510 aaKnown RBP10.51□□□□□ -0.73
TCOF1-204ENST00000427724 MRPS26Q9BYN8 205 aaKnown RBP10.51□□□□□ -0.73
TCOF1-204ENST00000427724 STRADBQ9C0K7 418 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 RAB6CQ9H0N0 254 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 RSPH9Q9H1X1 276 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-204ENST00000427724 EURLQ9NYK6 297 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 UBAP1Q9NZ09 502 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 B4GALT6Q9UBX8 382 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 MUTYHQ9UIF7 546 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 UBR3Q6ZT12 1888 aa10.51□□□□□ -0.73
TCOF1-204ENST00000427724 PAPPAQ13219 1627 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 C9J4A7 227 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 M0R3G1 203 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 FFAR3O14843 346 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 GPR42O15529 346 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 FKBP9O95302 570 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 CLDN7O95471 211 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 SLC6A11P48066 632 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 DSC1Q08554 894 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 NAB1Q13506 487 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 SPIDRQ14159 915 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 PIK3R6Q5UE93 754 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 AAGABQ6PD74 315 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 NAPRTQ6XQN6 538 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 SLC36A4Q6YBV0 504 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 FKBP9P1Q75LS8 142 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 ADCK1Q86TW2 530 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 SERPINA9Q86WD7 417 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 ZNF567Q8N184 647 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 NKAPQ8N5F7 415 aaKnown RBP10.5□□□□□ -0.73
TCOF1-204ENST00000427724 SELENOMQ8WWX9 145 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 NTAN1Q96AB6 310 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 THUMPD3Q9BV44 507 aaKnown RBP10.5□□□□□ -0.73
TCOF1-204ENST00000427724 ZNF334Q9HCZ1 680 aaPredicted RBP10.5□□□□□ -0.73
TCOF1-204ENST00000427724 MID1IP1Q9NPA3 183 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 MARCH5Q9NX47 278 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 FTSJ1Q9UET6 329 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 APOBEC3BQ9UH17 382 aaKnown RBP10.5□□□□□ -0.73
TCOF1-204ENST00000427724 CYTH4Q9UIA0 394 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 ASCC3Q8N3C0 2202 aaKnown RBP10.5□□□□□ -0.73
TCOF1-204ENST00000427724 ARAP2Q8WZ64 1704 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 MRASO14807 208 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 THEGLP0DJG4 465 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 GM2AP17900 193 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 ITPKAP23677 461 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 CD70P32970 193 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 ACTR3P61158 418 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 FAM189BP81408 668 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 SLC18A2Q05940 514 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 NAE1Q13564 534 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 CPSF6Q16630 551 aaKnown RBP eCLIP10.5□□□□□ -0.733e-9■□□□□ 9
TCOF1-204ENST00000427724 NADK2Q4G0N4 442 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 CLEC4FQ8N1N0 589 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 GPR156Q8NFN8 814 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 SLC2A11Q9BYW1 496 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 TRIT1Q9H3H1 467 aaKnown RBP10.5□□□□□ -0.73
TCOF1-204ENST00000427724 ENTPD4Q9Y227 616 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 FAM32AQ9Y421 112 aaKnown RBP10.5□□□□□ -0.73
TCOF1-204ENST00000427724 OR10H1Q9Y4A9 318 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 K7ERQ8 282 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 CBFA2T3O75081 653 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 CXCL10P02778 98 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 T-ENOLP0DO92 83 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 PROZP22891 400 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 XKR6Q5GH73 641 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 LYSMD3Q7Z3D4 306 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 PQLC1Q8N2U9 271 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 FBXW8Q8N3Y1 598 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 LINGO1Q96FE5 620 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 PLEKHG4BQ96PX9 1271 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 SSC5DA1L4H1 1573 aa10.5□□□□□ -0.73
TCOF1-204ENST00000427724 BCL10O95999 233 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms