RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 CDC42P60953 191 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 EPHX4Q8IUS5 362 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 ST13P5Q8NFI4 369 aaPredicted RBP13.67□□□□□ -0.22
RPL28-202ENST00000426763 TTLQ8NG68 377 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 PHOSPHO2Q8TCD6 241 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 RMND5BQ96G75 393 aaPredicted RBP13.67□□□□□ -0.22
RPL28-202ENST00000426763 LRIG1Q96JA1 1093 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 NPAS2Q99743 824 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 SLC2A11Q9BYW1 496 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 SLC2A4RGQ9NR83 387 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 VARSP26640 1264 aaKnown RBP13.67□□□□□ -0.22
RPL28-202ENST00000426763 HEPACAMQ14CZ8 416 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 WDR45BQ5MNZ6 344 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 ANO7Q6IWH7 933 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 ERICH5Q6P6B1 374 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 OFCC1Q8IZS5 231 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 USP29Q9HBJ7 922 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 EQTNQ9NQ60 294 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 PACSIN3Q9UKS6 424 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 PCDHGA4Q9Y5G9 962 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 NRAPQ86VF7 1730 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 B4DGG1 531 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 KLF8O95600 359 aaPredicted RBP13.67□□□□□ -0.22
RPL28-202ENST00000426763 KCNA5P22460 613 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 AP1S2P56377 157 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 RNF44Q7L0R7 432 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 MRM3Q9HC36 420 aaKnown RBP13.67□□□□□ -0.22
RPL28-202ENST00000426763 MAT2BQ9NZL9 334 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 SIRPGQ9P1W8 387 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 FBXW2Q9UKT8 454 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 CLPTM1O96005 669 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 GSRP00390 522 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 B4GALT6Q9UBX8 382 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 TRPS1Q9UHF7 1281 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 MYH7P12883 1935 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 FAM159BA6NKW6 160 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 POP7O75817 140 aaKnown RBP13.67□□□□□ -0.22
RPL28-202ENST00000426763 PSMB9P28065 219 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 MTAPQ13126 283 aa13.67□□□□□ -0.22
RPL28-202ENST00000426763 REXO5Q96IC2 774 aaKnown RBP13.67□□□□□ -0.22
RPL28-202ENST00000426763 B3GALT2O43825 422 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 FOXM1Q08050 763 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 ZNF155Q12901 538 aaPredicted RBP13.66□□□□□ -0.22
RPL28-202ENST00000426763 SAMD14Q8IZD0 417 aaPredicted RBP13.66□□□□□ -0.22
RPL28-202ENST00000426763 TLCD1Q96CP7 247 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 C1orf109Q9NX04 203 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 RUVBL1Q9Y265 456 aaKnown RBP13.66□□□□□ -0.22
RPL28-202ENST00000426763 USP54Q70EL1 1684 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 STRCP1A6NGW2 1772 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 NEMP2A6NFY4 417 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 MAN2B1O00754 1011 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 MYL12BO14950 172 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 KMOO15229 486 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 ARRB1P49407 418 aaPredicted RBP13.66□□□□□ -0.22
RPL28-202ENST00000426763 CCR8P51685 355 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 CLCNKAP51800 687 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 EIF4HQ15056 248 aaKnown RBP13.66□□□□□ -0.22
RPL28-202ENST00000426763 ZNF805Q5CZA5 627 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 TCEAL8Q8IYN2 117 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 SLC39A11Q8N1S5 342 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 IGSF8Q969P0 613 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 SLC2A6Q9UGQ3 507 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 CYTH4Q9UIA0 394 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 RGS5O15539 181 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 ADAMTS4O75173 837 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 PAPSS2O95340 614 aaPredicted RBP13.66□□□□□ -0.22
RPL28-202ENST00000426763 UGT2B15P54855 530 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 SPIBQ01892 262 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 CDC73Q6P1J9 531 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 ERN2Q76MJ5 926 aaKnown RBP13.66□□□□□ -0.22
RPL28-202ENST00000426763 RAB7BQ96AH8 199 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 SAMD4AQ9UPU9 718 aaKnown RBP13.66□□□□□ -0.22
RPL28-202ENST00000426763 FOXO6A8MYZ6 492 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 TCEA3O75764 348 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 PGLSO95336 258 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 ITGBL1O95965 494 aaPredicted RBP13.66□□□□□ -0.22
RPL28-202ENST00000426763 CST1P01037 141 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 FGFR3P22607 806 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 GRIA2P42262 883 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 NRG1Q02297 640 aaPredicted RBP13.66□□□□□ -0.22
RPL28-202ENST00000426763 AMZ1Q400G9 498 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 DEF8Q6ZN54 512 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 CYP2U1Q7Z449 544 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 FAM46DQ8NEK8 389 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 MAGEE2Q8TD90 523 aaPredicted RBP13.66□□□□□ -0.22
RPL28-202ENST00000426763 ESAMQ96AP7 390 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 RBM18Q96H35 190 aaKnown RBP13.66□□□□□ -0.22
RPL28-202ENST00000426763 CASD1Q96PB1 797 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 EFCAB11Q9BUY7 163 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 TBC1D23Q9NUY8 699 aa13.66□□□□□ -0.22
RPL28-202ENST00000426763 DHRS12A0PJE2 317 aa13.65□□□□□ -0.22
RPL28-202ENST00000426763 FAM72CH0Y354 149 aa13.65□□□□□ -0.22
RPL28-202ENST00000426763 TMEM189-UBE2V1I3L0A0 370 aa13.65□□□□□ -0.22
RPL28-202ENST00000426763 PIP5K1BO14986 540 aa13.65□□□□□ -0.22
RPL28-202ENST00000426763 PFKLP17858 780 aa13.65□□□□□ -0.22
RPL28-202ENST00000426763 ITPKBP27987 946 aa13.65□□□□□ -0.22
RPL28-202ENST00000426763 PITX1P78337 314 aaPredicted RBP13.65□□□□□ -0.22
RPL28-202ENST00000426763 FAM72AQ5TYM5 149 aa13.65□□□□□ -0.22
RPL28-202ENST00000426763 TTC23Q5W5X9 447 aa13.65□□□□□ -0.22
RPL28-202ENST00000426763 FAM72DQ6L9T8 149 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms