RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 THOC5Q13769 683 aaKnown RBP5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 FRG1Q14331 258 aaKnown RBP5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 ITIH4Q14624 930 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 TYSND1Q2T9J0 566 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 DEFB133Q30KQ1 61 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 UAP1L1Q3KQV9 507 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 AASDHQ4L235 1098 aaPredicted RBP5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 ZNF658BQ4V348 819 aaPredicted RBP5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 BCL7AQ4VC05 210 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 CTSL3PQ5NE16 218 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 TEDDM1Q5T9Z0 273 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 MRNIPQ6NTE8 343 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 CNSTQ6PJW8 725 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 PACS1Q6VY07 963 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 C3orf62Q6ZUJ4 267 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 CHST15Q7LFX5 561 aaPredicted RBP5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 LRRTM4Q86VH4 590 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 GALNT13Q8IUC8 556 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 RELL1Q8IUW5 271 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 CCNJLQ8IV13 435 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 PALM2Q8IXS6 379 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 KRT222Q8N1A0 295 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 C2CD4AQ8NCU7 369 aaPredicted RBP5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 ZNF548Q8NEK5 533 aaPredicted RBP5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 GSDMBQ8TAX9 411 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 GPBAR1Q8TDU6 330 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 LMX1AQ8TE12 382 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 FBF1Q8TES7 1133 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 UBXN4Q92575 508 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 SKA1Q96BD8 255 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 FAM136AQ96C01 138 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 DCUN1D1Q96GG9 259 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 CAMK1GQ96NX5 476 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 BIRC8Q96P09 236 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 OR2M4Q96R27 311 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 NAT9Q9BTE0 207 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 FAM129AQ9BZQ8 928 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 SLC13A1Q9BZW2 595 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 ZDHHC5Q9C0B5 715 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 PHACTR1Q9C0D0 580 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 P2RY12Q9H244 342 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 VPS37BQ9H9H4 285 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 PPANQ9NQ55 473 aaKnown RBP5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 SPATS2LQ9NUQ6 558 aaKnown RBP5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 ZNF358Q9NW07 568 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 VPS18Q9P253 973 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 GULP1Q9UBP9 304 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 FAM8A1Q9UBU6 413 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 MTRF1LQ9UGC7 380 aaKnown RBP5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 APOBEC3BQ9UH17 382 aaKnown RBP5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 FBXO5Q9UKT4 447 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 DNAJC16Q9Y2G8 782 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 CRYL1Q9Y2S2 319 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 GPC6Q9Y625 555 aaPredicted RBP5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 ZNF106Q9H2Y7 1883 aaKnown RBP5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 CEP192Q8TEP8 1941 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 TRPM6Q9BX84 2022 aa5.62□□□□□ -1.51
HERPUD2-204ENST00000426180 TRBV23OR9-2A0A075B6M9 112 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 UBA6A0AVT1 1052 aaPredicted RBP5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 FAM159BA6NKW6 160 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 KMOO15229 486 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 CASC3O15234 703 aaKnown RBP5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 SH3BP5O60239 455 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 SNX2O60749 519 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 NIPSNAP2O75323 286 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 NDUFS3O75489 264 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 CER1O95813 267 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 GSTA2P09210 222 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 CTSEP14091 401 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 NID1P14543 1247 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 OGNP20774 298 aaKnown RBP5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 RPS3P23396 243 aaKnown RBP eCLIP5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 PMLP29590 882 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 CCR7P32248 378 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 ADH7P40394 386 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 ACTR1BP42025 376 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 NSG1P42857 185 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 PREPP48147 710 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 LEPRP48357 1165 aaKnown RBP5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 ARRB1P49407 418 aaPredicted RBP5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 TTPAP49638 278 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 PRLHRP49683 370 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 CCT8P50990 548 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 ATXN3P54252 364 aaPredicted RBP5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 PMS2P54278 862 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 CSE1LP55060 971 aaKnown RBP5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 ACTR1AP61163 376 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 HNRNPKP61978 463 aaKnown RBP eCLIP5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 ARHGAP8P85298 464 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 GTF2H3Q13889 308 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 NFE2L1Q14494 772 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 BRD3Q15059 726 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 UAP1Q16222 522 aaPredicted RBP5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 KBTBD12Q3ZCT8 623 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 AARS2Q5JTZ9 985 aaKnown RBP5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 RBM20Q5T481 1227 aaKnown RBP5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 STPG1Q5TH74 334 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 LYPLAL1Q5VWZ2 237 aa5.61□□□□□ -1.51
HERPUD2-204ENST00000426180 WDR93Q6P2C0 686 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms