RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 ENPP2Q13822 863 aa26.02■■□□□ 1.76
LDB1-202ENST00000425280 SULT1C3Q6IMI6 304 aa26.02■■□□□ 1.76
LDB1-202ENST00000425280 DDIASQ8IXT1 998 aa26.02■■□□□ 1.76
LDB1-202ENST00000425280 ARHGAP24Q8N264 748 aa26.02■■□□□ 1.76
LDB1-202ENST00000425280 OR52B6Q8NGF0 335 aa26.02■■□□□ 1.76
LDB1-202ENST00000425280 RP9Q8TA86 221 aaKnown RBP26.02■■□□□ 1.76
LDB1-202ENST00000425280 NUS1Q96E22 293 aa26.02■■□□□ 1.76
LDB1-202ENST00000425280 DENND2DQ9H6A0 471 aaPredicted RBP26.02■■□□□ 1.76
LDB1-202ENST00000425280 NOL11Q9H8H0 719 aaKnown RBP26.02■■□□□ 1.76
LDB1-202ENST00000425280 AKTIPQ9H8T0 292 aa26.02■■□□□ 1.76
LDB1-202ENST00000425280 LMCD1Q9NZU5 365 aa26.02■■□□□ 1.76
LDB1-202ENST00000425280 BTRCQ9Y297 605 aa26.02■■□□□ 1.76
LDB1-202ENST00000425280 SZT2Q5T011 3432 aa26.02■■□□□ 1.76
LDB1-202ENST00000425280 INPP4BO15327 924 aa26.02■■□□□ 1.76
LDB1-202ENST00000425280 GPC4O75487 556 aa26.02■■□□□ 1.76
LDB1-202ENST00000425280 SOD1P00441 154 aa26.02■■□□□ 1.76
LDB1-202ENST00000425280 FTH1P02794 183 aa26.02■■□□□ 1.76
LDB1-202ENST00000425280 UROSP10746 265 aa26.02■■□□□ 1.76
LDB1-202ENST00000425280 CUL3Q13618 768 aa26.02■■□□□ 1.76
LDB1-202ENST00000425280 GTF2H2Q13888 395 aa26.02■■□□□ 1.76
LDB1-202ENST00000425280 HERC3Q15034 1050 aa26.02■■□□□ 1.76
LDB1-202ENST00000425280 GTF2H2CQ6P1K8 395 aa26.02■■□□□ 1.76
LDB1-202ENST00000425280 MTSS1LQ765P7 747 aa26.02■■□□□ 1.76
LDB1-202ENST00000425280 ZNF765Q7L2R6 523 aa26.02■■□□□ 1.76
LDB1-202ENST00000425280 ELMO1Q92556 727 aa26.02■■□□□ 1.76
LDB1-202ENST00000425280 TMEM79Q9BSE2 394 aa26.02■■□□□ 1.76
LDB1-202ENST00000425280 RTKNQ9BST9 563 aa26.02■■□□□ 1.76
LDB1-202ENST00000425280 NUSAP1Q9BXS6 441 aaKnown RBP26.02■■□□□ 1.76
LDB1-202ENST00000425280 CNOT6Q9ULM6 557 aaKnown RBP26.02■■□□□ 1.76
LDB1-202ENST00000425280 SEC23IPQ9Y6Y8 1000 aaKnown RBP26.02■■□□□ 1.76
LDB1-202ENST00000425280 MPC1LP0DKB6 136 aa26.01■■□□□ 1.75
LDB1-202ENST00000425280 GALK1P51570 392 aa26.01■■□□□ 1.75
LDB1-202ENST00000425280 CTSCP53634 463 aa26.01■■□□□ 1.75
LDB1-202ENST00000425280 PKNOX1P55347 436 aa26.01■■□□□ 1.75
LDB1-202ENST00000425280 CREB5Q02930 508 aa26.01■■□□□ 1.75
LDB1-202ENST00000425280 CNTN1Q12860 1018 aa26.01■■□□□ 1.75
LDB1-202ENST00000425280 UBTD2Q8WUN7 234 aa26.01■■□□□ 1.75
LDB1-202ENST00000425280 WWOXQ9NZC7 414 aa26.01■■□□□ 1.75
LDB1-202ENST00000425280 OR4F21O95013 312 aa26■■□□□ 1.75
LDB1-202ENST00000425280 LINC00032P0C843 101 aa26■■□□□ 1.75
LDB1-202ENST00000425280 ERVPABLB-1P60509 514 aa26■■□□□ 1.75
LDB1-202ENST00000425280 TMEM115Q12893 351 aaPredicted RBP26■■□□□ 1.75
LDB1-202ENST00000425280 CYLC2Q14093 348 aaPredicted RBP26■■□□□ 1.75
LDB1-202ENST00000425280 SQLEQ14534 574 aa26■■□□□ 1.75
LDB1-202ENST00000425280 MBOAT1Q6ZNC8 495 aa26■■□□□ 1.75
LDB1-202ENST00000425280 CHPFQ8IZ52 775 aa26■■□□□ 1.75
LDB1-202ENST00000425280 THTPAQ9BU02 230 aa26■■□□□ 1.75
LDB1-202ENST00000425280 PDE10AQ9Y233 779 aa26■■□□□ 1.75
LDB1-202ENST00000425280 QSOX1O00391 747 aa26■■□□□ 1.75
LDB1-202ENST00000425280 OR7A17O14581 309 aa26■■□□□ 1.75
LDB1-202ENST00000425280 GIPC1O14908 333 aa26■■□□□ 1.75
LDB1-202ENST00000425280 LZTS3O60299 673 aaPredicted RBP26■■□□□ 1.75
LDB1-202ENST00000425280 WFS1O76024 890 aa26■■□□□ 1.75
LDB1-202ENST00000425280 TM7SF2O76062 418 aa26■■□□□ 1.75
LDB1-202ENST00000425280 ITGAXP20702 1163 aa26■■□□□ 1.75
LDB1-202ENST00000425280 RAP1GDS1P52306 607 aa26■■□□□ 1.75
LDB1-202ENST00000425280 WASHC2DQ5SRD0 308 aa26■■□□□ 1.75
LDB1-202ENST00000425280 FAM46CQ5VWP2 391 aa26■■□□□ 1.75
LDB1-202ENST00000425280 UBE2R2Q712K3 238 aaPredicted RBP26■■□□□ 1.75
LDB1-202ENST00000425280 PHYKPLQ8IUZ5 450 aa26■■□□□ 1.75
LDB1-202ENST00000425280 ASB11Q8WXH4 323 aa26■■□□□ 1.75
LDB1-202ENST00000425280 CDK15Q96Q40 435 aa26■■□□□ 1.75
LDB1-202ENST00000425280 CD244Q9BZW8 370 aa26■■□□□ 1.75
LDB1-202ENST00000425280 EPS15L1Q9UBC2 864 aa26■■□□□ 1.75
LDB1-202ENST00000425280 FADS3Q9Y5Q0 445 aa26■■□□□ 1.75
LDB1-202ENST00000425280 TICRRQ7Z2Z1 1910 aa25.99■■□□□ 1.75
LDB1-202ENST00000425280 K7ESM1 405 aa25.99■■□□□ 1.75
LDB1-202ENST00000425280 C8GP07360 202 aa25.99■■□□□ 1.75
LDB1-202ENST00000425280 EZRP15311 586 aaKnown RBP25.99■■□□□ 1.75
LDB1-202ENST00000425280 CDC16Q13042 620 aa25.99■■□□□ 1.75
LDB1-202ENST00000425280 HTR4Q13639 388 aa25.99■■□□□ 1.75
LDB1-202ENST00000425280 PIP5KL1Q5T9C9 394 aa25.99■■□□□ 1.75
LDB1-202ENST00000425280 LETMD1Q6P1Q0 360 aa25.99■■□□□ 1.75
LDB1-202ENST00000425280 EFL1Q7Z2Z2 1120 aaKnown RBP25.99■■□□□ 1.75
LDB1-202ENST00000425280 ZNF513Q8N8E2 541 aaPredicted RBP25.99■■□□□ 1.75
LDB1-202ENST00000425280 DCBLD1Q8N8Z6 715 aa25.99■■□□□ 1.75
LDB1-202ENST00000425280 HMGCLL1Q8TB92 370 aa25.99■■□□□ 1.75
LDB1-202ENST00000425280 SKA2Q8WVK7 121 aaPredicted RBP25.99■■□□□ 1.75
LDB1-202ENST00000425280 RAB7BQ96AH8 199 aa25.99■■□□□ 1.75
LDB1-202ENST00000425280 CLPTM1LQ96KA5 538 aa25.99■■□□□ 1.75
LDB1-202ENST00000425280 SLC12A9Q9BXP2 914 aa25.99■■□□□ 1.75
LDB1-202ENST00000425280 MRGBPQ9NV56 204 aa25.99■■□□□ 1.75
LDB1-202ENST00000425280 GIMAP2Q9UG22 337 aa25.99■■□□□ 1.75
LDB1-202ENST00000425280 TMEM202A6NGA9 273 aa25.99■■□□□ 1.75
LDB1-202ENST00000425280 TSPAN6O43657 245 aa25.99■■□□□ 1.75
LDB1-202ENST00000425280 CCNT2O60583 730 aaKnown RBP25.99■■□□□ 1.75
LDB1-202ENST00000425280 RPIAP49247 311 aa25.99■■□□□ 1.75
LDB1-202ENST00000425280 SCUBE1Q8IWY4 988 aa25.99■■□□□ 1.75
LDB1-202ENST00000425280 ASZ1Q8WWH4 475 aa25.99■■□□□ 1.75
LDB1-202ENST00000425280 EZH1Q92800 747 aaPredicted RBP25.99■■□□□ 1.75
LDB1-202ENST00000425280 P2RY13Q9BPV8 354 aa25.99■■□□□ 1.75
LDB1-202ENST00000425280 POLG2Q9UHN1 485 aa25.99■■□□□ 1.75
LDB1-202ENST00000425280 ST14Q9Y5Y6 855 aa25.99■■□□□ 1.75
LDB1-202ENST00000425280 K7EQS6 105 aa25.98■■□□□ 1.75
LDB1-202ENST00000425280 ENO2P09104 434 aaPredicted RBP25.98■■□□□ 1.75
LDB1-202ENST00000425280 ALDOCP09972 364 aaKnown RBP25.98■■□□□ 1.75
LDB1-202ENST00000425280 GDF5P43026 501 aa25.98■■□□□ 1.75
LDB1-202ENST00000425280 TNFRSF4P43489 277 aa25.98■■□□□ 1.75
LDB1-202ENST00000425280 PRLHRP49683 370 aa25.98■■□□□ 1.75
LDB1-202ENST00000425280 CDKL4Q5MAI5 379 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms