RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 EXD2Q9NVH0 621 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 B4GALT6Q9UBX8 382 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 BACE2Q9Y5Z0 518 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 PRR23AA6NEV1 266 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 DFNA5O60443 496 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 SLC22A3O75751 556 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 ESRRBO95718 433 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 ATXN8OSP0DMR3 200 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 WASP42768 502 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 PTSQ03393 145 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 LIPEQ05469 1076 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 ZXDCQ2QGD7 858 aaPredicted RBP11.73□□□□□ -0.53
PTPRN-204ENST00000423636 ARSIQ5FYB1 569 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 ZBTB49Q6ZSB9 765 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 DDX53Q86TM3 631 aaKnown RBP11.73□□□□□ -0.53
PTPRN-204ENST00000423636 IKZF5Q9H5V7 419 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 INTS10Q9NVR2 710 aaKnown RBP11.73□□□□□ -0.53
PTPRN-204ENST00000423636 LZTS1Q9Y250 596 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 FOXD2O60548 495 aaPredicted RBP11.73□□□□□ -0.53
PTPRN-204ENST00000423636 CLTBP09497 229 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 CCR7P32248 378 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 POLR2JP52435 117 aaKnown RBP11.73□□□□□ -0.53
PTPRN-204ENST00000423636 IL1RL1Q01638 556 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 CACNG1Q06432 222 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 TNK2Q07912 1038 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 RAB33AQ14088 237 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 TMC5Q6UXY8 1006 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 C10orf111Q8N326 155 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 NKAPQ8N5F7 415 aaKnown RBP11.73□□□□□ -0.53
PTPRN-204ENST00000423636 TMEM102Q8N9M5 508 aaPredicted RBP11.73□□□□□ -0.53
PTPRN-204ENST00000423636 OR56A4Q8NGH8 313 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 PROKR1Q8TCW9 393 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 ASB9Q96DX5 294 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 MED8Q96G25 268 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 FBXL20Q96IG2 436 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 THUMPD3Q9BV44 507 aaKnown RBP11.73□□□□□ -0.53
PTPRN-204ENST00000423636 PLXNA3P51805 1871 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 DMDP11532 3685 aa11.73□□□□□ -0.53
PTPRN-204ENST00000423636 CHEK2O96017 543 aa11.72□□□□□ -0.53
PTPRN-204ENST00000423636 ZNF7P17097 686 aaPredicted RBP11.72□□□□□ -0.53
PTPRN-204ENST00000423636 GSK3BP49841 420 aa11.72□□□□□ -0.53
PTPRN-204ENST00000423636 MYBPC1Q00872 1141 aa11.72□□□□□ -0.53
PTPRN-204ENST00000423636 B4GALNT1Q00973 533 aa11.72□□□□□ -0.53
PTPRN-204ENST00000423636 IMPG1Q17R60 797 aa11.72□□□□□ -0.53
PTPRN-204ENST00000423636 FAM174BQ3ZCQ3 159 aa11.72□□□□□ -0.53
PTPRN-204ENST00000423636 OGFRL1Q5TC84 451 aaPredicted RBP11.72□□□□□ -0.53
PTPRN-204ENST00000423636 MAGEE2Q8TD90 523 aaPredicted RBP11.72□□□□□ -0.53
PTPRN-204ENST00000423636 ITCHQ96J02 903 aa11.72□□□□□ -0.53
PTPRN-204ENST00000423636 MTERF1Q99551 399 aaKnown RBP11.72□□□□□ -0.53
PTPRN-204ENST00000423636 AASSQ9UDR5 926 aa11.72□□□□□ -0.53
PTPRN-204ENST00000423636 OAZ3Q9UMX2 235 aa11.72□□□□□ -0.53
PTPRN-204ENST00000423636 GPR45Q9Y5Y3 372 aa11.72□□□□□ -0.53
PTPRN-204ENST00000423636 DGKBQ9Y6T7 804 aa11.72□□□□□ -0.53
PTPRN-204ENST00000423636 SAP18O00422 153 aaKnown RBP11.72□□□□□ -0.53
PTPRN-204ENST00000423636 B4GAT1O43505 415 aa11.72□□□□□ -0.53
PTPRN-204ENST00000423636 ATP5BP06576 529 aaKnown RBP11.72□□□□□ -0.53
PTPRN-204ENST00000423636 RPS17P08708 135 aaKnown RBP11.72□□□□□ -0.53
PTPRN-204ENST00000423636 COL6A1P12109 1028 aa11.72□□□□□ -0.53
PTPRN-204ENST00000423636 TYRP14679 529 aa11.72□□□□□ -0.53
PTPRN-204ENST00000423636 ITGALP20701 1170 aa11.72□□□□□ -0.53
PTPRN-204ENST00000423636 TACR1P25103 407 aa11.72□□□□□ -0.53
PTPRN-204ENST00000423636 POLD2P49005 469 aa11.72□□□□□ -0.53
PTPRN-204ENST00000423636 GRIN2CQ14957 1233 aa11.72□□□□□ -0.53
PTPRN-204ENST00000423636 CRY1Q16526 586 aa11.72□□□□□ -0.53
PTPRN-204ENST00000423636 PGS1Q32NB8 556 aa11.72□□□□□ -0.53
PTPRN-204ENST00000423636 TMEM259Q4ZIN3 620 aa11.72□□□□□ -0.53
PTPRN-204ENST00000423636 CNKSR3Q6P9H4 555 aa11.72□□□□□ -0.53
PTPRN-204ENST00000423636 KCTD14Q9BQ13 255 aaPredicted RBP11.72□□□□□ -0.53
PTPRN-204ENST00000423636 BRD9Q9H8M2 597 aa11.72□□□□□ -0.53
PTPRN-204ENST00000423636 HPS4Q9NQG7 708 aa11.72□□□□□ -0.53
PTPRN-204ENST00000423636 COMMD8Q9NX08 183 aa11.72□□□□□ -0.53
PTPRN-204ENST00000423636 ZNF490Q9ULM2 529 aaPredicted RBP11.72□□□□□ -0.53
PTPRN-204ENST00000423636 SLC22A14Q9Y267 594 aa11.72□□□□□ -0.53
PTPRN-204ENST00000423636 SYCE1LA8MT33 242 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 ARPC2O15144 300 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 S100BP04271 92 aaPredicted RBP11.71□□□□□ -0.53
PTPRN-204ENST00000423636 PTGER3P43115 390 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 SPANXN4Q5MJ08 99 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 NANOGP8Q6NSW7 305 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 PARP8Q8N3A8 854 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 PCYOX1LQ8NBM8 494 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 OR2AP1Q8NGE2 309 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 OR10A6Q8NH74 314 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 FAR2Q96K12 515 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 MYRFLQ96LU7 910 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 LRRC3BQ96PB8 259 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 ATP13A3Q9H7F0 1226 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 YY1AP1Q9H869 796 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 ACTR8Q9H981 624 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 NANOGQ9H9S0 305 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 PFDN4Q9NQP4 134 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 ASAH2Q9NR71 780 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 SUN2Q9UH99 717 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 TBX21Q9UL17 535 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.71□□□□□ -0.53
PTPRN-204ENST00000423636 LEFTY1O75610 366 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 DIRAS1O95057 198 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 CXCL10P02778 98 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 PRKACGP22612 351 aa11.71□□□□□ -0.53
PTPRN-204ENST00000423636 CTNNB1P35222 781 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms