RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 MSH3P20585 1137 aa16.43■□□□□ 0.22
UPF3AP3-201ENST00000420996 CHRNA4P43681 627 aa16.43■□□□□ 0.22
UPF3AP3-201ENST00000420996 KPNA2P52292 529 aaKnown RBP16.43■□□□□ 0.22
UPF3AP3-201ENST00000420996 INPP5JQ15735 1006 aaPredicted RBP16.43■□□□□ 0.22
UPF3AP3-201ENST00000420996 SLC1A5Q15758 541 aa16.43■□□□□ 0.22
UPF3AP3-201ENST00000420996 LONRF2Q1L5Z9 754 aa16.43■□□□□ 0.22
UPF3AP3-201ENST00000420996 FNBP1LQ5T0N5 605 aa16.43■□□□□ 0.22
UPF3AP3-201ENST00000420996 JMJD6Q6NYC1 403 aaPredicted RBP16.43■□□□□ 0.22
UPF3AP3-201ENST00000420996 GLT6D1Q7Z4J2 308 aa16.43■□□□□ 0.22
UPF3AP3-201ENST00000420996 BLOC1S5Q8TDH9 187 aa16.43■□□□□ 0.22
UPF3AP3-201ENST00000420996 CPT1BQ92523 772 aa16.43■□□□□ 0.22
UPF3AP3-201ENST00000420996 MRGPRX2Q96LB1 330 aa16.43■□□□□ 0.22
UPF3AP3-201ENST00000420996 NLNQ9BYT8 704 aa16.43■□□□□ 0.22
UPF3AP3-201ENST00000420996 SOHLH2Q9NX45 425 aa16.43■□□□□ 0.22
UPF3AP3-201ENST00000420996 DDX56Q9NY93 547 aaKnown RBP16.43■□□□□ 0.22
UPF3AP3-201ENST00000420996 SAE1Q9UBE0 346 aaPredicted RBP16.43■□□□□ 0.22
UPF3AP3-201ENST00000420996 G3BP2Q9UN86 482 aaKnown RBP16.43■□□□□ 0.22
UPF3AP3-201ENST00000420996 SNX7Q9UNH6 387 aa16.43■□□□□ 0.22
UPF3AP3-201ENST00000420996 SPTBP11277 2137 aa16.42■□□□□ 0.22
UPF3AP3-201ENST00000420996 BUD23O43709 281 aaKnown RBP16.42■□□□□ 0.22
UPF3AP3-201ENST00000420996 TMEM63AO94886 807 aa16.42■□□□□ 0.22
UPF3AP3-201ENST00000420996 DDAH2O95865 285 aa16.42■□□□□ 0.22
UPF3AP3-201ENST00000420996 SLC35G4P0C7Q5 338 aa16.42■□□□□ 0.22
UPF3AP3-201ENST00000420996 HLA-DPA1P20036 260 aa16.42■□□□□ 0.22
UPF3AP3-201ENST00000420996 VARSP26640 1264 aaKnown RBP16.42■□□□□ 0.22
UPF3AP3-201ENST00000420996 AKT1P31749 480 aa16.42■□□□□ 0.22
UPF3AP3-201ENST00000420996 TFDP2Q14188 446 aa16.42■□□□□ 0.22
UPF3AP3-201ENST00000420996 PRAMEF17Q5VTA0 474 aa16.42■□□□□ 0.22
UPF3AP3-201ENST00000420996 LCN10Q6JVE6 187 aa16.42■□□□□ 0.22
UPF3AP3-201ENST00000420996 DUS1LQ6P1R4 473 aaKnown RBP16.42■□□□□ 0.22
UPF3AP3-201ENST00000420996 MFSD7Q6UXD7 560 aa16.42■□□□□ 0.22
UPF3AP3-201ENST00000420996 ENDOVQ8N8Q3 282 aaKnown RBP16.42■□□□□ 0.22
UPF3AP3-201ENST00000420996 FDCSPQ8NFU4 85 aa16.42■□□□□ 0.22
UPF3AP3-201ENST00000420996 OR2L2Q8NH16 312 aa16.42■□□□□ 0.22
UPF3AP3-201ENST00000420996 ZNF398Q8TD17 642 aa16.42■□□□□ 0.22
UPF3AP3-201ENST00000420996 FCRL5Q96RD9 977 aa16.42■□□□□ 0.22
UPF3AP3-201ENST00000420996 DEF6Q9H4E7 631 aa16.42■□□□□ 0.22
UPF3AP3-201ENST00000420996 FANCEQ9HB96 536 aa16.42■□□□□ 0.22
UPF3AP3-201ENST00000420996 SYTL2Q9HCH5 934 aa16.42■□□□□ 0.22
UPF3AP3-201ENST00000420996 TCFL5Q9UL49 500 aa16.42■□□□□ 0.22
UPF3AP3-201ENST00000420996 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.42■□□□□ 0.22
UPF3AP3-201ENST00000420996 COLEC10Q9Y6Z7 277 aa16.42■□□□□ 0.22
UPF3AP3-201ENST00000420996 STX7O15400 261 aaKnown RBP16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 PYGMP11217 842 aa16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 POLR2CP19387 275 aaPredicted RBP16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 NDUFS1P28331 727 aa16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 RORAP35398 523 aa16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 CDKN2BP42772 138 aa16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 ARCN1P48444 511 aaKnown RBP16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 VAV2P52735 878 aa16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 PRKAA1Q13131 559 aa16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 TAZQ16635 292 aa16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 FBXO38Q6PIJ6 1188 aa16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 DET1Q7L5Y6 550 aa16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 RHOT2Q8IXI1 618 aa16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 RHOT1Q8IXI2 618 aa16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 TMEM102Q8N9M5 508 aaPredicted RBP16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 Q8NA96 180 aa16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 GLIS1Q8NBF1 620 aa16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 SPDYE1Q8NFV5 336 aaPredicted RBP16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 CLIP3Q96DZ5 547 aa16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 OXNAD1Q96HP4 312 aaPredicted RBP16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 PPM1MQ96MI6 270 aa16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 VAT1Q99536 393 aa16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 TLR10Q9BXR5 811 aa16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 SLC29A3Q9BZD2 475 aa16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 SLAMF7Q9NQ25 335 aa16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 C1GALT1Q9NS00 363 aa16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 IFNKQ9P0W0 207 aa16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 KLHL8Q9P2G9 620 aaPredicted RBP16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 POMT2Q9UKY4 750 aa16.41■□□□□ 0.22
UPF3AP3-201ENST00000420996 SLC9B1P1A6NJY1 282 aa16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 TCP11X1B4DZS4 312 aa16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 MATN2O00339 956 aa16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 ZNF185O15231 689 aa16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 AKR1B10O60218 316 aa16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 CST8O60676 142 aa16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 PRAMEF1O95521 474 aa16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 CAPN1P07384 714 aa16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 RNF224P0DH78 156 aa16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 PECAM1P16284 738 aaPredicted RBP16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 CDH3P22223 829 aa16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 SLC1A1P43005 524 aa16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 ITGA1P56199 1179 aa16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 ABRQ12979 859 aa16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 MPP3Q13368 585 aa16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 GSE1Q14687 1217 aa16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 EIF2S3LQ2VIR3 472 aaKnown RBP16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 BCL7AQ4VC05 210 aa16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 PRR30Q53SZ7 412 aaPredicted RBP16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 MED25Q71SY5 747 aa16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 PID1Q7Z2X4 250 aa16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 ZNF567Q8N184 647 aa16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 IPMKQ8NFU5 416 aa16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 OR4E2Q8NGC2 313 aa16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 OR8K1Q8NGG5 319 aa16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 PNPLA2Q96AD5 504 aa16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 LINC00615Q96LM1 132 aaPredicted RBP16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 DNAJC7Q99615 494 aa16.4■□□□□ 0.22
UPF3AP3-201ENST00000420996 CCM2Q9BSQ5 444 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms