RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 ITPRIPL1Q6GPH6 555 aa4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 LINC00346Q8IVM7 164 aa4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 MCEMP1Q8IX19 187 aa4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 C17orf53Q8N3J3 647 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 L3MBTL4Q8NA19 623 aa4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 ZBTB8BQ8NAP8 495 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 OR2T12Q8NG77 320 aa4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 WDR20Q8TBZ3 569 aa4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 GRAPLQ8TC17 118 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 DAZLQ92904 295 aaKnown RBP4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 NSUN4Q96CB9 384 aaKnown RBP4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 FBXO17Q96EF6 278 aa4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 ABHD6Q9BV23 337 aa4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 ZBTB20Q9HC78 741 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 OSER1Q9NX31 292 aa4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 VPS28Q9UK41 221 aa4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 PTRH2Q9Y3E5 179 aaKnown RBP4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 ASTN2O75129 1339 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 SOS1Q07889 1333 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P49-201ENST00000418882 C15orf62A8K5M9 175 aa4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 PRSS47A8MTI9 375 aa4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 HEPACAM2A8MVW5 462 aa4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 B4DLN1 442 aa4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 INHBAP08476 426 aa4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 IGHV4-38-2P0DP08 117 aa4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 TRIM21P19474 475 aaKnown RBP4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 EPHA2P29317 976 aa4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 PSMC4P43686 418 aa4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 NR2C2P49116 596 aa4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 MRPL12P52815 198 aaKnown RBP4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 PNLIPRP2P54317 469 aa4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 SNRPEP62304 92 aaKnown RBP4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 TUBB4BP68371 445 aa4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 MAPRE1Q15691 268 aaKnown RBP4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 PLEKHS1Q5SXH7 462 aa4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 GCNT6Q5T4J0 391 aa4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 GRTP1Q5TC63 336 aa4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 KLC3Q6P597 504 aa4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 C15orf39Q6ZRI6 1047 aa4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 INTS8Q75QN2 995 aaKnown RBP4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 NOTCH2NLQ7Z3S9 236 aa4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 GALNT5Q7Z7M9 940 aa4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 FOXP4Q8IVH2 680 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 TMTC2Q8N394 836 aa4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 SLC47A1Q96FL8 570 aa4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 LARSQ9P2J5 1176 aaKnown RBP4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 AMACRQ9UHK6 382 aa4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 PCDHGB4Q9UN71 923 aa4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 GPR34Q9UPC5 381 aa4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 LAS1LQ9Y4W2 734 aaKnown RBP4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 SPIN1Q9Y657 262 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P49-201ENST00000418882 hCG_1807616A0A1W2PRN6 198 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 FEZF1A0PJY2 475 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 LRRC72A6NJI9 287 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 BLOC1S5-TXNDC5H3BN57 136 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 EDIL3O43854 480 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 ENTPD3O75355 529 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 GFPT2O94808 682 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 ZWINTO95229 277 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 PGM3O95394 542 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 APOHP02749 345 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 CSH1P0DML2 217 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 CSH2P0DML3 217 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 PORP16435 677 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 GNAZP19086 355 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 NRIP1P48552 1158 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 GNB1P62873 340 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 ZNF876PQ49A33 203 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 ADALQ6DHV7 355 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 ADAM5Q6NVV9 412 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 ARHGAP11AQ6P4F7 1023 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 TEX38Q6PEX7 206 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 LDB1Q86U70 411 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 ADIPOR2Q86V24 386 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 PLD3Q8IV08 490 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 CTCFLQ8NI51 663 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 TAS1R2Q8TE23 839 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 FAM81BQ96LP2 452 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 FSD1Q9BTV5 496 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 MAK16Q9BXY0 300 aaKnown RBP4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 RTN4RQ9BZR6 473 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 HHATLQ9HCP6 504 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 HACL1Q9UJ83 578 aa4.08□□□□□ -1.76
HMGB1P49-201ENST00000418882 CYSRT1A8MQ03 144 aa4.07□□□□□ -1.76
HMGB1P49-201ENST00000418882 MAGEB17A8MXT2 336 aa4.07□□□□□ -1.76
HMGB1P49-201ENST00000418882 PLOD2O00469 737 aa4.07□□□□□ -1.76
HMGB1P49-201ENST00000418882 NTN3O00634 580 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P49-201ENST00000418882 LDLRP01130 860 aa4.07□□□□□ -1.76
HMGB1P49-201ENST00000418882 FRMD6-AS1P0C7T7 363 aa4.07□□□□□ -1.76
HMGB1P49-201ENST00000418882 PRSS56P0CW18 603 aa4.07□□□□□ -1.76
HMGB1P49-201ENST00000418882 HOXC8P31273 242 aa4.07□□□□□ -1.76
HMGB1P49-201ENST00000418882 ATP12AP54707 1039 aa4.07□□□□□ -1.76
HMGB1P49-201ENST00000418882 PCLAFQ15004 111 aa4.07□□□□□ -1.76
HMGB1P49-201ENST00000418882 LCE1FQ5T754 118 aa4.07□□□□□ -1.76
HMGB1P49-201ENST00000418882 MFSD6Q6ZSS7 791 aa4.07□□□□□ -1.76
HMGB1P49-201ENST00000418882 HAUS6Q7Z4H7 955 aa4.07□□□□□ -1.76
HMGB1P49-201ENST00000418882 POC5Q8NA72 575 aa4.07□□□□□ -1.76
HMGB1P49-201ENST00000418882 OR2AJ1Q8NGZ0 328 aa4.07□□□□□ -1.76
HMGB1P49-201ENST00000418882 MOAP1Q96BY2 351 aa4.07□□□□□ -1.76
HMGB1P49-201ENST00000418882 LGALS12Q96DT0 336 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms