RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 CEP104O60308 925 aa16.09■□□□□ 0.17
LINC00404-201ENST00000418660 RASSF9O75901 435 aa16.09■□□□□ 0.17
LINC00404-201ENST00000418660 AP2A2O94973 939 aa16.09■□□□□ 0.17
LINC00404-201ENST00000418660 APRTP07741 180 aa16.09■□□□□ 0.17
LINC00404-201ENST00000418660 ZSCAN5DPP0CG00 497 aa16.09■□□□□ 0.17
LINC00404-201ENST00000418660 ADRA1DP25100 572 aa16.09■□□□□ 0.17
LINC00404-201ENST00000418660 MSNP26038 577 aaKnown RBP16.09■□□□□ 0.17
LINC00404-201ENST00000418660 RPL22P35268 128 aaKnown RBP16.09■□□□□ 0.17
LINC00404-201ENST00000418660 GRIA1P42261 906 aa16.09■□□□□ 0.17
LINC00404-201ENST00000418660 ITIH4Q14624 930 aa16.09■□□□□ 0.17
LINC00404-201ENST00000418660 PLCL1Q15111 1095 aa16.09■□□□□ 0.17
LINC00404-201ENST00000418660 DBN1Q16643 649 aa16.09■□□□□ 0.17
LINC00404-201ENST00000418660 TAF1BQ53T94 588 aaPredicted RBP16.09■□□□□ 0.17
LINC00404-201ENST00000418660 CACHD1Q5VU97 1274 aa16.09■□□□□ 0.17
LINC00404-201ENST00000418660 IRGCQ6NXR0 463 aa16.09■□□□□ 0.17
LINC00404-201ENST00000418660 MICALCLQ6ZW33 695 aa16.09■□□□□ 0.17
LINC00404-201ENST00000418660 LILRA3Q8N6C8 439 aaPredicted RBP16.09■□□□□ 0.17
LINC00404-201ENST00000418660 JPH3Q8WXH2 748 aaPredicted RBP16.09■□□□□ 0.17
LINC00404-201ENST00000418660 KLHL6Q8WZ60 621 aa16.09■□□□□ 0.17
LINC00404-201ENST00000418660 TTC9Q92623 222 aa16.09■□□□□ 0.17
LINC00404-201ENST00000418660 ZNF768Q9H5H4 540 aaKnown RBP16.09■□□□□ 0.17
LINC00404-201ENST00000418660 APMAPQ9HDC9 416 aa16.09■□□□□ 0.17
LINC00404-201ENST00000418660 PILRAQ9UKJ1 303 aa16.09■□□□□ 0.17
LINC00404-201ENST00000418660 HEBP2Q9Y5Z4 205 aa16.09■□□□□ 0.17
LINC00404-201ENST00000418660 COLEC10Q9Y6Z7 277 aa16.09■□□□□ 0.17
LINC00404-201ENST00000418660 CCDC162PA2VCL2 907 aa16.08■□□□□ 0.16
LINC00404-201ENST00000418660 KIF1CO43896 1103 aaKnown RBP16.08■□□□□ 0.16
LINC00404-201ENST00000418660 RAD1O60671 282 aa16.08■□□□□ 0.16
LINC00404-201ENST00000418660 GSTM1P09488 218 aa16.08■□□□□ 0.16
LINC00404-201ENST00000418660 NDUFS1P28331 727 aa16.08■□□□□ 0.16
LINC00404-201ENST00000418660 FOXN2P32314 431 aa16.08■□□□□ 0.16
LINC00404-201ENST00000418660 NSG1P42857 185 aa16.08■□□□□ 0.16
LINC00404-201ENST00000418660 SEPHS1P49903 392 aa16.08■□□□□ 0.16
LINC00404-201ENST00000418660 GSTM4Q03013 218 aa16.08■□□□□ 0.16
LINC00404-201ENST00000418660 GSE1Q14687 1217 aa16.08■□□□□ 0.16
LINC00404-201ENST00000418660 ZNF658BQ4V348 819 aaPredicted RBP16.08■□□□□ 0.16
LINC00404-201ENST00000418660 TSTD2Q5T7W7 516 aa16.08■□□□□ 0.16
LINC00404-201ENST00000418660 KIAA1614Q5VZ46 1190 aa16.08■□□□□ 0.16
LINC00404-201ENST00000418660 DUS1LQ6P1R4 473 aaKnown RBP16.08■□□□□ 0.16
LINC00404-201ENST00000418660 FAM92BQ6ZTR7 304 aa16.08■□□□□ 0.16
LINC00404-201ENST00000418660 CACNA2D3Q8IZS8 1091 aa16.08■□□□□ 0.16
LINC00404-201ENST00000418660 CLDN19Q8N6F1 224 aa16.08■□□□□ 0.16
LINC00404-201ENST00000418660 IL22RA1Q8N6P7 574 aa16.08■□□□□ 0.16
LINC00404-201ENST00000418660 ZSCAN1Q8NBB4 408 aa16.08■□□□□ 0.16
LINC00404-201ENST00000418660 OR13J1Q8NGT2 312 aa16.08■□□□□ 0.16
LINC00404-201ENST00000418660 RMDN2Q96LZ7 410 aa16.08■□□□□ 0.16
LINC00404-201ENST00000418660 KIR3DX1Q9H7L2 352 aa16.08■□□□□ 0.16
LINC00404-201ENST00000418660 COG4Q9H9E3 785 aa16.08■□□□□ 0.16
LINC00404-201ENST00000418660 HOMER3Q9NSC5 361 aa16.08■□□□□ 0.16
LINC00404-201ENST00000418660 SMARCAL1Q9NZC9 954 aa16.08■□□□□ 0.16
LINC00404-201ENST00000418660 SEMA5BQ9P283 1151 aa16.08■□□□□ 0.16
LINC00404-201ENST00000418660 SLC24A2Q9UI40 661 aa16.08■□□□□ 0.16
LINC00404-201ENST00000418660 BPTFQ12830 3046 aa16.07■□□□□ 0.16
LINC00404-201ENST00000418660 OR5K3A6NET4 321 aa16.07■□□□□ 0.16
LINC00404-201ENST00000418660 OR51F1A6NGY5 319 aa16.07■□□□□ 0.16
LINC00404-201ENST00000418660 QSOX1O00391 747 aa16.07■□□□□ 0.16
LINC00404-201ENST00000418660 MAP4P27816 1152 aaKnown RBP16.07■□□□□ 0.16
LINC00404-201ENST00000418660 CXCR5P32302 372 aa16.07■□□□□ 0.16
LINC00404-201ENST00000418660 ACVR1Q04771 509 aa16.07■□□□□ 0.16
LINC00404-201ENST00000418660 FOXM1Q08050 763 aa16.07■□□□□ 0.16
LINC00404-201ENST00000418660 RPA4Q13156 261 aa16.07■□□□□ 0.16
LINC00404-201ENST00000418660 KRT33BQ14525 404 aa16.07■□□□□ 0.16
LINC00404-201ENST00000418660 LYPLAL1Q5VWZ2 237 aa16.07■□□□□ 0.16
LINC00404-201ENST00000418660 ZNF449Q6P9G9 518 aa16.07■□□□□ 0.16
LINC00404-201ENST00000418660 PACS1Q6VY07 963 aa16.07■□□□□ 0.16
LINC00404-201ENST00000418660 NLRP9Q7RTR0 991 aa16.07■□□□□ 0.16
LINC00404-201ENST00000418660 GSTA5Q7RTV2 222 aa16.07■□□□□ 0.16
LINC00404-201ENST00000418660 UBXN4Q92575 508 aa16.07■□□□□ 0.16
LINC00404-201ENST00000418660 PEX13Q92968 403 aa16.07■□□□□ 0.16
LINC00404-201ENST00000418660 HDAC10Q969S8 669 aa16.07■□□□□ 0.16
LINC00404-201ENST00000418660 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.07■□□□□ 0.16
LINC00404-201ENST00000418660 CD180Q99467 661 aa16.07■□□□□ 0.16
LINC00404-201ENST00000418660 OR52A5Q9H2C5 316 aa16.07■□□□□ 0.16
LINC00404-201ENST00000418660 GRPEL1Q9HAV7 217 aa16.07■□□□□ 0.16
LINC00404-201ENST00000418660 EIF2B3Q9NR50 452 aaKnown RBP16.07■□□□□ 0.16
LINC00404-201ENST00000418660 HRASLS2Q9NWW9 162 aa16.07■□□□□ 0.16
LINC00404-201ENST00000418660 SLC2A6Q9UGQ3 507 aa16.07■□□□□ 0.16
LINC00404-201ENST00000418660 TCAF1Q9Y4C2 921 aa16.07■□□□□ 0.16
LINC00404-201ENST00000418660 TMEM184BQ9Y519 407 aaPredicted RBP16.07■□□□□ 0.16
LINC00404-201ENST00000418660 PCDHGA4Q9Y5G9 962 aa16.07■□□□□ 0.16
LINC00404-201ENST00000418660 SDK2Q58EX2 2172 aa16.06■□□□□ 0.16
LINC00404-201ENST00000418660 STK17BO94768 372 aa16.06■□□□□ 0.16
LINC00404-201ENST00000418660 NELFEP18615 380 aaKnown RBP16.06■□□□□ 0.16
LINC00404-201ENST00000418660 WT1P19544 449 aaPredicted RBP16.06■□□□□ 0.16
LINC00404-201ENST00000418660 KCNJ1P48048 391 aa16.06■□□□□ 0.16
LINC00404-201ENST00000418660 CD151P48509 253 aa16.06■□□□□ 0.16
LINC00404-201ENST00000418660 PPP1CAP62136 330 aa16.06■□□□□ 0.16
LINC00404-201ENST00000418660 IL11RAQ14626 422 aa16.06■□□□□ 0.16
LINC00404-201ENST00000418660 AFTPHQ6ULP2 937 aa16.06■□□□□ 0.16
LINC00404-201ENST00000418660 OOSP2Q86WS3 158 aa16.06■□□□□ 0.16
LINC00404-201ENST00000418660 NLGN4XQ8N0W4 816 aa16.06■□□□□ 0.16
LINC00404-201ENST00000418660 PPHLN1Q8NEY8 458 aaKnown RBP16.06■□□□□ 0.16
LINC00404-201ENST00000418660 NLGN4YQ8NFZ3 816 aaPredicted RBP16.06■□□□□ 0.16
LINC00404-201ENST00000418660 SGSM3Q96HU1 749 aa16.06■□□□□ 0.16
LINC00404-201ENST00000418660 ZNF778Q96MU6 729 aa16.06■□□□□ 0.16
LINC00404-201ENST00000418660 OR6C1Q96RD1 312 aa16.06■□□□□ 0.16
LINC00404-201ENST00000418660 TTC1Q99614 292 aa16.06■□□□□ 0.16
LINC00404-201ENST00000418660 TRIT1Q9H3H1 467 aaKnown RBP16.06■□□□□ 0.16
LINC00404-201ENST00000418660 JRKLQ9Y4A0 524 aa16.06■□□□□ 0.16
LINC00404-201ENST00000418660 AHCTF1Q8WYP5 2266 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms