RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 CPED1A4D0V7 1026 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 FAM47DPA6NHR8 397 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 CCDC154A6NI56 674 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 LRRIQ4A6NIV6 560 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 OR5K4A6NMS3 321 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 TMX2-CTNND1H3BSU7 103 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 GOLGA8RI6L899 631 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 HIP1O00291 1037 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 FBP2O00757 339 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 MUSKO15146 869 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 HTRA2O43464 458 aaPredicted RBP5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 MAGEC1O60732 1142 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 HSF2BPO75031 334 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 KLHL2O95198 593 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 ECDO95905 644 aaPredicted RBP5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 ITGB3P05106 788 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 MYZAPP0CAP1 466 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 GIMD1P0DJR0 217 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 ODC1P11926 461 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 ZNF12P17014 697 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 GLRA2P23416 452 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 CFL1P23528 166 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 CIITAP33076 1130 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 PCK1P35558 622 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 PSMC2P35998 433 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 CBX5P45973 191 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 COPB1P53618 953 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 NCKAP1LP55160 1127 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 CDH8P55286 799 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 UBASH3AP57075 661 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 ANTXR2P58335 489 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 RPS3AP61247 264 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 SRSF3P84103 164 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 CD83Q01151 205 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 UBXN1Q04323 297 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 RELQ04864 619 aaPredicted RBP5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 MALLQ13021 153 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 PDCLQ13371 301 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 ENPP2Q13822 863 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 KCNMB1Q16558 191 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 SDHAF4Q5VUM1 108 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 TMEM198Q66K66 360 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 GUSBP11Q6P575 273 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 ALKAL1Q6UXT8 129 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 MARK2Q7KZI7 788 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 OVCH2Q7RTZ1 564 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 BIVMQ86UB2 503 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 STK32CQ86UX6 486 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 SPATA24Q86W54 205 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 TMEM151BQ8IW70 566 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 ZBTB8OSQ8IWT0 167 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 IFT20Q8IY31 132 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 GRAMD1CQ8IYS0 662 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 CDYL2Q8N8U2 506 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 ATP6V0D2Q8N8Y2 350 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 ZBTB34Q8NCN2 500 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 OR2T3Q8NH03 318 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 PPP1R35Q8TAP8 253 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 NAT14Q8WUY8 206 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 NRG4Q8WWG1 115 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 DNAJC9Q8WXX5 260 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 FATE1Q969F0 183 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 FAM149B1Q96BN6 582 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 MVB12AQ96EY5 273 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 WDR24Q96S15 920 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 NAPGQ99747 312 aaPredicted RBP5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 GPATCH1Q9BRR8 931 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 CENPOQ9BU64 300 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 HAPLN2Q9GZV7 340 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 CNTD2Q9H8S5 307 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 SPHK2Q9NRA0 654 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 FAM114A2Q9NRY5 505 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 DDX43Q9NXZ2 648 aaKnown RBP5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 PLK2Q9NYY3 685 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 KCMF1Q9P0J7 381 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 THAP10Q9P2Z0 257 aaPredicted RBP5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 TBK1Q9UHD2 729 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 ZFP69BQ9UJL9 534 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 INTUQ9ULD6 942 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 EXOC7Q9UPT5 735 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 CHMP2BQ9UQN3 213 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 RPH3AQ9Y2J0 694 aaPredicted RBP5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 LOXL2Q9Y4K0 774 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 PCDHA5Q9Y5H7 936 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 NOX1Q9Y5S8 564 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 KLF2Q9Y5W3 355 aaPredicted RBP5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 PTPRJQ12913 1337 aa5.47□□□□□ -1.53
ECHDC1-206ENST00000417628 MYH11P35749 1972 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 MYOCOSA0A1B0GUC4 107 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 A0A1W2PRQ8 180 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 ZNF503-AS2A6NEH8 195 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 ANKUB1A6NFN9 424 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 CCDC169A6NNP5 214 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 RNF212BA8MTL3 300 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 MIF4GDA9UHW6 222 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 NEDD8-MDP1E9PL57 170 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 NDC80O14777 642 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 XPO1O14980 1071 aaKnown RBP5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 NKX2-8O15522 239 aa5.46□□□□□ -1.54
ECHDC1-206ENST00000417628 DUX1O43812 170 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms