RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 CNDP1Q96KN2 507 aa16.66■□□□□ 0.26
CALD1-204ENST00000417172 C1QTNF2Q9BXJ5 285 aa16.66■□□□□ 0.26
CALD1-204ENST00000417172 FAM126AQ9BYI3 521 aaPredicted RBP16.66■□□□□ 0.26
CALD1-204ENST00000417172 TRIM39Q9HCM9 518 aa16.66■□□□□ 0.26
CALD1-204ENST00000417172 KCNK4Q9NYG8 393 aa16.66■□□□□ 0.26
CALD1-204ENST00000417172 HEY2Q9UBP5 337 aa16.66■□□□□ 0.26
CALD1-204ENST00000417172 EIF2B4Q9UI10 523 aaKnown RBP16.66■□□□□ 0.26
CALD1-204ENST00000417172 CCDC189A1A4V9 331 aa16.66■□□□□ 0.26
CALD1-204ENST00000417172 SLC31A1O15431 190 aa16.66■□□□□ 0.26
CALD1-204ENST00000417172 FFAR2O15552 330 aa16.66■□□□□ 0.26
CALD1-204ENST00000417172 CCDC15Q0P6D6 951 aa16.66■□□□□ 0.26
CALD1-204ENST00000417172 UBXN2BQ14CS0 331 aa16.66■□□□□ 0.26
CALD1-204ENST00000417172 HABP4Q5JVS0 413 aaKnown RBP16.66■□□□□ 0.26
CALD1-204ENST00000417172 XKR5Q6UX68 686 aa16.66■□□□□ 0.26
CALD1-204ENST00000417172 MTDHQ86UE4 582 aaKnown RBP16.66■□□□□ 0.26
CALD1-204ENST00000417172 CCM2Q9BSQ5 444 aa16.66■□□□□ 0.26
CALD1-204ENST00000417172 SLC17A9Q9BYT1 436 aa16.66■□□□□ 0.26
CALD1-204ENST00000417172 MYLK2Q9H1R3 596 aa16.66■□□□□ 0.26
CALD1-204ENST00000417172 COG4Q9H9E3 785 aa16.66■□□□□ 0.26
CALD1-204ENST00000417172 LMAN1LQ9HAT1 526 aa16.66■□□□□ 0.26
CALD1-204ENST00000417172 EBF1Q9UH73 591 aa16.66■□□□□ 0.26
CALD1-204ENST00000417172 OARD1Q9Y530 152 aa16.66■□□□□ 0.26
CALD1-204ENST00000417172 MAN2B1O00754 1011 aa16.65■□□□□ 0.26
CALD1-204ENST00000417172 GRID2O43424 1007 aa16.65■□□□□ 0.26
CALD1-204ENST00000417172 SNX2O60749 519 aa16.65■□□□□ 0.26
CALD1-204ENST00000417172 GPC4O75487 556 aa16.65■□□□□ 0.26
CALD1-204ENST00000417172 UBOX5O94941 541 aa16.65■□□□□ 0.26
CALD1-204ENST00000417172 CBSLP0DN79 551 aa16.65■□□□□ 0.26
CALD1-204ENST00000417172 PDHA2P29803 388 aa16.65■□□□□ 0.26
CALD1-204ENST00000417172 CBSP35520 551 aa16.65■□□□□ 0.26
CALD1-204ENST00000417172 IGFALSP35858 605 aa16.65■□□□□ 0.26
CALD1-204ENST00000417172 RPL14P50914 215 aaKnown RBP16.65■□□□□ 0.26
CALD1-204ENST00000417172 ALDH18A1P54886 795 aaKnown RBP16.65■□□□□ 0.26
CALD1-204ENST00000417172 PRKAA1Q13131 559 aa16.65■□□□□ 0.26
CALD1-204ENST00000417172 SGCGQ13326 291 aa16.65■□□□□ 0.26
CALD1-204ENST00000417172 SETDB1Q15047 1291 aa16.65■□□□□ 0.26
CALD1-204ENST00000417172 ZNF658BQ4V348 819 aaPredicted RBP16.65■□□□□ 0.26
CALD1-204ENST00000417172 SLC9B1Q4ZJI4 515 aa16.65■□□□□ 0.26
CALD1-204ENST00000417172 PLEKHS1Q5SXH7 462 aa16.65■□□□□ 0.26
CALD1-204ENST00000417172 RAB44Q7Z6P3 723 aaPredicted RBP16.65■□□□□ 0.26
CALD1-204ENST00000417172 CUZD1Q86UP6 607 aa16.65■□□□□ 0.26
CALD1-204ENST00000417172 HORMAD1Q86X24 394 aa16.65■□□□□ 0.26
CALD1-204ENST00000417172 ADHFE1Q8IWW8 467 aa16.65■□□□□ 0.26
CALD1-204ENST00000417172 MAFAQ8NHW3 353 aaPredicted RBP16.65■□□□□ 0.26
CALD1-204ENST00000417172 TRPC4APQ8TEL6 797 aa16.65■□□□□ 0.26
CALD1-204ENST00000417172 ERP27Q96DN0 273 aa16.65■□□□□ 0.26
CALD1-204ENST00000417172 SEMA4BQ9NPR2 832 aaPredicted RBP16.65■□□□□ 0.26
CALD1-204ENST00000417172 NUDT4Q9NZJ9 180 aa16.65■□□□□ 0.26
CALD1-204ENST00000417172 KLHL42Q9P2K6 505 aa16.65■□□□□ 0.26
CALD1-204ENST00000417172 HAO1Q9UJM8 370 aa16.65■□□□□ 0.26
CALD1-204ENST00000417172 FZD4Q9ULV1 537 aa16.65■□□□□ 0.26
CALD1-204ENST00000417172 CA5BQ9Y2D0 317 aa16.65■□□□□ 0.26
CALD1-204ENST00000417172 NUAK1O60285 661 aa16.64■□□□□ 0.26
CALD1-204ENST00000417172 DIAPH2O60879 1101 aa16.64■□□□□ 0.26
CALD1-204ENST00000417172 RPS17P08708 135 aaKnown RBP16.64■□□□□ 0.26
CALD1-204ENST00000417172 IDH3AP50213 366 aa16.64■□□□□ 0.26
CALD1-204ENST00000417172 SH3BP2P78314 561 aa16.64■□□□□ 0.26
CALD1-204ENST00000417172 ZBTB16Q05516 673 aa16.64■□□□□ 0.26
CALD1-204ENST00000417172 FZD5Q13467 585 aa16.64■□□□□ 0.26
CALD1-204ENST00000417172 TUBB3Q13509 450 aa16.64■□□□□ 0.26
CALD1-204ENST00000417172 AGERQ15109 404 aa16.64■□□□□ 0.26
CALD1-204ENST00000417172 PDCD2Q16342 344 aaPredicted RBP16.64■□□□□ 0.26
CALD1-204ENST00000417172 SYTL3Q4VX76 610 aa16.64■□□□□ 0.26
CALD1-204ENST00000417172 CLEC6AQ6EIG7 209 aa16.64■□□□□ 0.26
CALD1-204ENST00000417172 ANO7Q6IWH7 933 aa16.64■□□□□ 0.26
CALD1-204ENST00000417172 KIAA1161Q6NSJ0 714 aa16.64■□□□□ 0.26
CALD1-204ENST00000417172 USP30Q70CQ3 517 aa16.64■□□□□ 0.26
CALD1-204ENST00000417172 PGBD3Q8N328 593 aa16.64■□□□□ 0.26
CALD1-204ENST00000417172 ZCCHC2Q9C0B9 1178 aaKnown RBP16.64■□□□□ 0.26
CALD1-204ENST00000417172 ZBTB26Q9HCK0 441 aa16.64■□□□□ 0.26
CALD1-204ENST00000417172 TM7SF3Q9NS93 570 aa16.64■□□□□ 0.26
CALD1-204ENST00000417172 CIDEBQ9UHD4 219 aa16.64■□□□□ 0.26
CALD1-204ENST00000417172 PCTPQ9UKL6 214 aa16.64■□□□□ 0.26
CALD1-204ENST00000417172 SCML1Q9UN30 329 aa16.64■□□□□ 0.26
CALD1-204ENST00000417172 SORCS3Q9UPU3 1222 aa16.64■□□□□ 0.26
CALD1-204ENST00000417172 PDE10AQ9Y233 779 aa16.64■□□□□ 0.26
CALD1-204ENST00000417172 NCKAP1Q9Y2A7 1128 aa16.64■□□□□ 0.26
CALD1-204ENST00000417172 MATN2O00339 956 aa16.64■□□□□ 0.25
CALD1-204ENST00000417172 TAPBPO15533 448 aa16.64■□□□□ 0.25
CALD1-204ENST00000417172 SLCO2B1O94956 709 aa16.64■□□□□ 0.25
CALD1-204ENST00000417172 ENO3P13929 434 aaPredicted RBP16.64■□□□□ 0.25
CALD1-204ENST00000417172 ALOX15P16050 662 aaPredicted RBP16.64■□□□□ 0.25
CALD1-204ENST00000417172 ABRQ12979 859 aa16.64■□□□□ 0.25
CALD1-204ENST00000417172 BCL7AQ4VC05 210 aa16.64■□□□□ 0.25
CALD1-204ENST00000417172 UBE2R2Q712K3 238 aaPredicted RBP16.64■□□□□ 0.25
CALD1-204ENST00000417172 C11orf96Q7Z7L8 435 aa16.64■□□□□ 0.25
CALD1-204ENST00000417172 SIX5Q8N196 739 aa16.64■□□□□ 0.25
CALD1-204ENST00000417172 DCBLD1Q8N8Z6 715 aa16.64■□□□□ 0.25
CALD1-204ENST00000417172 CFAP61Q8NHU2 1237 aa16.64■□□□□ 0.25
CALD1-204ENST00000417172 ASZ1Q8WWH4 475 aa16.64■□□□□ 0.25
CALD1-204ENST00000417172 SKA1Q96BD8 255 aa16.64■□□□□ 0.25
CALD1-204ENST00000417172 HHIPQ96QV1 700 aa16.64■□□□□ 0.25
CALD1-204ENST00000417172 EGFL8Q99944 293 aa16.64■□□□□ 0.25
CALD1-204ENST00000417172 NUF2Q9BZD4 464 aa16.64■□□□□ 0.25
CALD1-204ENST00000417172 WDR26Q9H7D7 661 aa16.64■□□□□ 0.25
CALD1-204ENST00000417172 PREBQ9HCU5 417 aa16.64■□□□□ 0.25
CALD1-204ENST00000417172 FBXL21Q9UKT6 434 aa16.64■□□□□ 0.25
CALD1-204ENST00000417172 GOLGA8QA0A0J9YX86 632 aa16.63■□□□□ 0.25
CALD1-204ENST00000417172 SLC5A10A0PJK1 596 aa16.63■□□□□ 0.25
CALD1-204ENST00000417172 GOLGA8OA6NCC3 632 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms