RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 C12orf66Q96MD2 445 aa14.75□□□□□ -0.05
UBXN4-203ENST00000416538 MAP3K3Q99759 626 aa14.75□□□□□ -0.05
UBXN4-203ENST00000416538 ZPBPQ9BS86 351 aa14.75□□□□□ -0.05
UBXN4-203ENST00000416538 ULBP3Q9BZM4 244 aa14.75□□□□□ -0.05
UBXN4-203ENST00000416538 GPN2Q9H9Y4 310 aaPredicted RBP14.75□□□□□ -0.05
UBXN4-203ENST00000416538 STARD5Q9NSY2 213 aa14.75□□□□□ -0.05
UBXN4-203ENST00000416538 SLC24A2Q9UI40 661 aa14.75□□□□□ -0.05
UBXN4-203ENST00000416538 CRLS1Q9UJA2 301 aa14.75□□□□□ -0.05
UBXN4-203ENST00000416538 SEC16AO15027 2179 aa14.75□□□□□ -0.05
UBXN4-203ENST00000416538 CCDC88CQ9P219 2028 aa14.75□□□□□ -0.05
UBXN4-203ENST00000416538 OR5K3A6NET4 321 aa14.74□□□□□ -0.05
UBXN4-203ENST00000416538 OR51F1A6NGY5 319 aa14.74□□□□□ -0.05
UBXN4-203ENST00000416538 KIAA0754O94854 1291 aa14.74□□□□□ -0.05
UBXN4-203ENST00000416538 CRTAMO95727 393 aa14.74□□□□□ -0.05
UBXN4-203ENST00000416538 AP2A1O95782 977 aa14.74□□□□□ -0.05
UBXN4-203ENST00000416538 PRKAR1AP10644 381 aa14.74□□□□□ -0.05
UBXN4-203ENST00000416538 FOLR1P15328 257 aa14.74□□□□□ -0.05
UBXN4-203ENST00000416538 NELFEP18615 380 aaKnown RBP14.74□□□□□ -0.05
UBXN4-203ENST00000416538 ITGALP20701 1170 aa14.74□□□□□ -0.05
UBXN4-203ENST00000416538 ABHD18Q0P651 414 aa14.74□□□□□ -0.05
UBXN4-203ENST00000416538 CDC20Q12834 499 aa14.74□□□□□ -0.05
UBXN4-203ENST00000416538 POU6F1Q14863 301 aa14.74□□□□□ -0.05
UBXN4-203ENST00000416538 PLCL1Q15111 1095 aa14.74□□□□□ -0.05
UBXN4-203ENST00000416538 OASLQ15646 514 aaKnown RBP14.74□□□□□ -0.05
UBXN4-203ENST00000416538 PARP6Q2NL67 630 aa14.74□□□□□ -0.05
UBXN4-203ENST00000416538 CAPRIN2Q6IMN6 1127 aaKnown RBP14.74□□□□□ -0.05
UBXN4-203ENST00000416538 FBXO38Q6PIJ6 1188 aa14.74□□□□□ -0.05
UBXN4-203ENST00000416538 SYCE1Q8N0S2 351 aa14.74□□□□□ -0.05
UBXN4-203ENST00000416538 UBL4BQ8N7F7 174 aa14.74□□□□□ -0.05
UBXN4-203ENST00000416538 ZSCAN1Q8NBB4 408 aa14.74□□□□□ -0.05
UBXN4-203ENST00000416538 GLIS1Q8NBF1 620 aa14.74□□□□□ -0.05
UBXN4-203ENST00000416538 GALNT6Q8NCL4 622 aa14.74□□□□□ -0.05
UBXN4-203ENST00000416538 HM13Q8TCT9 377 aa14.74□□□□□ -0.05
UBXN4-203ENST00000416538 ZNF514Q96K75 400 aaPredicted RBP14.74□□□□□ -0.05
UBXN4-203ENST00000416538 FERMT1Q9BQL6 677 aa14.74□□□□□ -0.05
UBXN4-203ENST00000416538 NLE1Q9NVX2 485 aaPredicted RBP14.74□□□□□ -0.05
UBXN4-203ENST00000416538 PCSK5Q92824 1860 aa14.74□□□□□ -0.05
UBXN4-203ENST00000416538 NBASA2RRP1 2371 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 GOLGA6L3A6NEY3 463 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 ZNF891A8MT65 544 aaPredicted RBP14.73□□□□□ -0.05
UBXN4-203ENST00000416538 H7C0S8 307 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 POLBP06746 335 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 EBLN1P0CF75 366 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 FGF5P12034 268 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 ACRV1P26436 265 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 MAP4P27816 1152 aaKnown RBP14.73□□□□□ -0.05
UBXN4-203ENST00000416538 CETN2P41208 172 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 GRIA1P42261 906 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 SEPT6Q14141 434 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 MAP7Q14244 749 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 DBN1Q16643 649 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 KCTD19Q17RG1 926 aaPredicted RBP14.73□□□□□ -0.05
UBXN4-203ENST00000416538 SERPINA9Q86WD7 417 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 CLDN19Q8N6F1 224 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 TTC13Q8NBP0 860 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 STARD8Q92502 1023 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 ULK4Q96C45 1275 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 RUFY1Q96T51 708 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 COPS8Q99627 209 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 C19orf43Q9BQ61 176 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 ARHGAP9Q9BRR9 750 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 OR52A5Q9H2C5 316 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 KIR3DX1Q9H7L2 352 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 LRRC40Q9H9A6 602 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 COG4Q9H9E3 785 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 IMPACTQ9P2X3 320 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 FEZ2Q9UHY8 353 aaPredicted RBP14.73□□□□□ -0.05
UBXN4-203ENST00000416538 PRSS21Q9Y6M0 314 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 RPS6KL1Q9Y6S9 549 aa14.73□□□□□ -0.05
UBXN4-203ENST00000416538 GOLGA6L9A6NEM1 432 aa14.72□□□□□ -0.05
UBXN4-203ENST00000416538 TLCD2A6NGC4 264 aa14.72□□□□□ -0.05
UBXN4-203ENST00000416538 J3QKU1 62 aa14.72□□□□□ -0.05
UBXN4-203ENST00000416538 LIASO43766 372 aa14.72□□□□□ -0.05
UBXN4-203ENST00000416538 SLC28A2O43868 658 aa14.72□□□□□ -0.05
UBXN4-203ENST00000416538 SPAG6O75602 509 aa14.72□□□□□ -0.05
UBXN4-203ENST00000416538 FURINP09958 794 aa14.72□□□□□ -0.05
UBXN4-203ENST00000416538 SLC35G4P0C7Q5 338 aa14.72□□□□□ -0.05
UBXN4-203ENST00000416538 ATP1B2P14415 290 aaPredicted RBP14.72□□□□□ -0.05
UBXN4-203ENST00000416538 ETS1P14921 441 aa14.72□□□□□ -0.05
UBXN4-203ENST00000416538 PSMA3P25788 255 aa14.72□□□□□ -0.05
UBXN4-203ENST00000416538 PDHA2P29803 388 aa14.72□□□□□ -0.05
UBXN4-203ENST00000416538 FOXN2P32314 431 aa14.72□□□□□ -0.05
UBXN4-203ENST00000416538 PREPP48147 710 aa14.72□□□□□ -0.05
UBXN4-203ENST00000416538 KPNA2P52292 529 aaKnown RBP14.72□□□□□ -0.05
UBXN4-203ENST00000416538 POLE2P56282 527 aa14.72□□□□□ -0.05
UBXN4-203ENST00000416538 SIX1Q15475 284 aaPredicted RBP14.72□□□□□ -0.05
UBXN4-203ENST00000416538 CCDC38Q502W7 563 aa14.72□□□□□ -0.05
UBXN4-203ENST00000416538 CFAP206Q8IYR0 622 aa14.72□□□□□ -0.05
UBXN4-203ENST00000416538 ESX1Q8N693 406 aa14.72□□□□□ -0.05
UBXN4-203ENST00000416538 OR52K1Q8NGK4 314 aa14.72□□□□□ -0.05
UBXN4-203ENST00000416538 ZDHHC12Q96GR4 267 aa14.72□□□□□ -0.05
UBXN4-203ENST00000416538 CDKN2AIPNLQ96HQ2 116 aa14.72□□□□□ -0.05
UBXN4-203ENST00000416538 PPP1R2P1Q96PQ5 205 aa14.72□□□□□ -0.05
UBXN4-203ENST00000416538 TRIM4Q9C037 500 aa14.72□□□□□ -0.05
UBXN4-203ENST00000416538 AKIRIN1Q9H9L7 192 aaPredicted RBP14.72□□□□□ -0.05
UBXN4-203ENST00000416538 ZDHHC3Q9NYG2 299 aa14.72□□□□□ -0.05
UBXN4-203ENST00000416538 LNPEPQ9UIQ6 1025 aa14.72□□□□□ -0.05
UBXN4-203ENST00000416538 CROTQ9UKG9 612 aa14.72□□□□□ -0.05
UBXN4-203ENST00000416538 SETXQ7Z333 2677 aaKnown RBP14.71□□□□□ -0.05
UBXN4-203ENST00000416538 FLNBO75369 2602 aaKnown RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms