RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 ZNF460Q14592 562 aa13.03□□□□□ -0.32
CNN3-203ENST00000415017 SHBQ15464 509 aa13.03□□□□□ -0.32
CNN3-203ENST00000415017 TTMPQ5BVD1 217 aa13.03□□□□□ -0.32
CNN3-203ENST00000415017 AGAP9Q5VTM2 703 aa13.03□□□□□ -0.32
CNN3-203ENST00000415017 KANSL1Q7Z3B3 1105 aa13.03□□□□□ -0.32
CNN3-203ENST00000415017 VRK3Q8IV63 474 aa13.03□□□□□ -0.32
CNN3-203ENST00000415017 SPNS2Q8IVW8 549 aa13.03□□□□□ -0.32
CNN3-203ENST00000415017 PHACTR4Q8IZ21 702 aa13.03□□□□□ -0.32
CNN3-203ENST00000415017 TMEM151AQ8N4L1 468 aa13.03□□□□□ -0.32
CNN3-203ENST00000415017 LILRA3Q8N6C8 439 aaPredicted RBP13.03□□□□□ -0.32
CNN3-203ENST00000415017 BANPQ8N9N5 519 aa13.03□□□□□ -0.32
CNN3-203ENST00000415017 ASZ1Q8WWH4 475 aa13.03□□□□□ -0.32
CNN3-203ENST00000415017 PIGKQ92643 395 aa13.03□□□□□ -0.32
CNN3-203ENST00000415017 ATP6V1G3Q96LB4 118 aa13.03□□□□□ -0.32
CNN3-203ENST00000415017 TMEM168Q9H0V1 697 aa13.03□□□□□ -0.32
CNN3-203ENST00000415017 IRF2BPLQ9H1B7 796 aa13.03□□□□□ -0.32
CNN3-203ENST00000415017 OR52A5Q9H2C5 316 aa13.03□□□□□ -0.32
CNN3-203ENST00000415017 TCEAL2Q9H3H9 227 aaPredicted RBP13.03□□□□□ -0.32
CNN3-203ENST00000415017 DPEP2Q9H4A9 486 aa13.03□□□□□ -0.32
CNN3-203ENST00000415017 COG4Q9H9E3 785 aa13.03□□□□□ -0.32
CNN3-203ENST00000415017 CARS2Q9HA77 564 aaKnown RBP13.03□□□□□ -0.32
CNN3-203ENST00000415017 GPAMQ9HCL2 828 aa13.03□□□□□ -0.32
CNN3-203ENST00000415017 IGSF5Q9NSI5 407 aa13.03□□□□□ -0.32
CNN3-203ENST00000415017 ZNHIT2Q9UHR6 403 aa13.03□□□□□ -0.32
CNN3-203ENST00000415017 TRMT6Q9UJA5 497 aaKnown RBP13.03□□□□□ -0.32
CNN3-203ENST00000415017 ACOT9Q9Y305 439 aa13.03□□□□□ -0.32
CNN3-203ENST00000415017 PRKAB1Q9Y478 270 aa13.03□□□□□ -0.32
CNN3-203ENST00000415017 PLEKHM1Q9Y4G2 1056 aa13.03□□□□□ -0.32
CNN3-203ENST00000415017 SNX11Q9Y5W9 270 aa13.03□□□□□ -0.32
CNN3-203ENST00000415017 ATXN2Q99700 1313 aaKnown RBP13.03□□□□□ -0.32
CNN3-203ENST00000415017 ZNF292O60281 2723 aa13.03□□□□□ -0.32
CNN3-203ENST00000415017 E5RI56 91 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 KLHL2O95198 593 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 MT-ND3P03897 115 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 APOA4P06727 396 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 GSTA1P08263 222 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 MPC1LP0DKB6 136 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 PYGBP11216 843 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 CREB1P16220 341 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 KRT15P19012 456 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 KRT4P19013 534 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 DGKAP23743 735 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 GNPDA1P46926 289 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 SLC18A1P54219 525 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 PDAP1Q13442 181 aaKnown RBP13.02□□□□□ -0.33
CNN3-203ENST00000415017 NFE2L1Q14494 772 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 INSCQ1MX18 579 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 ACSBG2Q5FVE4 666 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 CAPRIN2Q6IMN6 1127 aaKnown RBP13.02□□□□□ -0.33
CNN3-203ENST00000415017 LRRC8EQ6NSJ5 796 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 CRTC3Q6UUV7 619 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 ABRAXAS1Q6UWZ7 409 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 PRR23BQ6ZRT6 265 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 CHST15Q7LFX5 561 aaPredicted RBP13.02□□□□□ -0.33
CNN3-203ENST00000415017 OTOAQ7RTW8 1153 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 PLD6Q8N2A8 252 aaKnown RBP13.02□□□□□ -0.33
CNN3-203ENST00000415017 NKAPQ8N5F7 415 aaKnown RBP13.02□□□□□ -0.33
CNN3-203ENST00000415017 EEF1AKMT1Q8WVE0 214 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 ELMO1Q92556 727 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 ALKBH8Q96BT7 664 aaKnown RBP13.02□□□□□ -0.33
CNN3-203ENST00000415017 RUFY1Q96T51 708 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 LRRC61Q9BV99 259 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 ZDHHC5Q9C0B5 715 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 DERL2Q9GZP9 239 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 ACBD3Q9H3P7 528 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 CAAP1Q9H8G2 361 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 FAM53CQ9NYF3 392 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 ACSL5Q9ULC5 683 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 SLC6A14Q9UN76 642 aa13.02□□□□□ -0.33
CNN3-203ENST00000415017 SMG5Q9UPR3 1016 aaKnown RBP13.02□□□□□ -0.33
CNN3-203ENST00000415017 TARM1B6A8C7 271 aa13.01□□□□□ -0.33
CNN3-203ENST00000415017 GFYI3L273 518 aa13.01□□□□□ -0.33
CNN3-203ENST00000415017 DFNA5O60443 496 aa13.01□□□□□ -0.33
CNN3-203ENST00000415017 RETP07949 1114 aa13.01□□□□□ -0.33
CNN3-203ENST00000415017 GIMD1P0DJR0 217 aa13.01□□□□□ -0.33
CNN3-203ENST00000415017 BRAFP15056 766 aa13.01□□□□□ -0.33
CNN3-203ENST00000415017 CD1DP15813 335 aa13.01□□□□□ -0.33
CNN3-203ENST00000415017 JUNDP17535 347 aa13.01□□□□□ -0.33
CNN3-203ENST00000415017 ITGB6P18564 788 aa13.01□□□□□ -0.33
CNN3-203ENST00000415017 PDHA2P29803 388 aa13.01□□□□□ -0.33
CNN3-203ENST00000415017 CRHR1P34998 444 aa13.01□□□□□ -0.33
CNN3-203ENST00000415017 GMPRP36959 345 aa13.01□□□□□ -0.33
CNN3-203ENST00000415017 MPLP40238 635 aa13.01□□□□□ -0.33
CNN3-203ENST00000415017 SLC12A2P55011 1212 aa13.01□□□□□ -0.33
CNN3-203ENST00000415017 C21orf59P57076 290 aa13.01□□□□□ -0.33
CNN3-203ENST00000415017 IL2P60568 153 aa13.01□□□□□ -0.33
CNN3-203ENST00000415017 HNRNPKP61978 463 aaKnown RBP eCLIP13.01□□□□□ -0.33
CNN3-203ENST00000415017 IRF9Q00978 393 aa13.01□□□□□ -0.33
CNN3-203ENST00000415017 TTLL9Q3SXZ7 439 aa13.01□□□□□ -0.33
CNN3-203ENST00000415017 HID1Q8IV36 788 aa13.01□□□□□ -0.33
CNN3-203ENST00000415017 CPNE9Q8IYJ1 553 aa13.01□□□□□ -0.33
CNN3-203ENST00000415017 CFAP206Q8IYR0 622 aa13.01□□□□□ -0.33
CNN3-203ENST00000415017 FSTL5Q8N475 847 aaPredicted RBP13.01□□□□□ -0.33
CNN3-203ENST00000415017 CCL4L1Q8NHW4 92 aa13.01□□□□□ -0.33
CNN3-203ENST00000415017 FAM136AQ96C01 138 aa13.01□□□□□ -0.33
CNN3-203ENST00000415017 ELF4Q99607 663 aaPredicted RBP13.01□□□□□ -0.33
CNN3-203ENST00000415017 STMN4Q9H169 189 aaPredicted RBP13.01□□□□□ -0.33
CNN3-203ENST00000415017 MED4Q9NPJ6 270 aa13.01□□□□□ -0.33
CNN3-203ENST00000415017 KLC4Q9NSK0 619 aa13.01□□□□□ -0.33
CNN3-203ENST00000415017 IKZF3Q9UKT9 509 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms