RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 RMDN2Q96LZ7 410 aa18.75■□□□□ 0.59
CPSF7-204ENST00000413232 TRIM5Q9C035 493 aa18.75■□□□□ 0.59
CPSF7-204ENST00000413232 FAM96AQ9H5X1 160 aa18.75■□□□□ 0.59
CPSF7-204ENST00000413232 FGF21Q9NSA1 209 aa18.75■□□□□ 0.59
CPSF7-204ENST00000413232 SLC24A2Q9UI40 661 aa18.75■□□□□ 0.59
CPSF7-204ENST00000413232 ANAPC2Q9UJX6 822 aa18.75■□□□□ 0.59
CPSF7-204ENST00000413232 RARRES3Q9UL19 164 aa18.75■□□□□ 0.59
CPSF7-204ENST00000413232 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.75■□□□□ 0.59
CPSF7-204ENST00000413232 REXO2Q9Y3B8 237 aaKnown RBP18.75■□□□□ 0.59
CPSF7-204ENST00000413232 PCDHB3Q9Y5E6 796 aa18.75■□□□□ 0.59
CPSF7-204ENST00000413232 PCDHGA6Q9Y5G7 932 aa18.75■□□□□ 0.59
CPSF7-204ENST00000413232 PCDHA3Q9Y5H8 950 aa18.75■□□□□ 0.59
CPSF7-204ENST00000413232 CDC14CA4D256 554 aa18.74■□□□□ 0.59
CPSF7-204ENST00000413232 SOWAHDA6NJG2 315 aa18.74■□□□□ 0.59
CPSF7-204ENST00000413232 DDX3YO15523 660 aaKnown RBP18.74■□□□□ 0.59
CPSF7-204ENST00000413232 PJA2O43164 708 aa18.74■□□□□ 0.59
CPSF7-204ENST00000413232 CREG1O75629 220 aa18.74■□□□□ 0.59
CPSF7-204ENST00000413232 ANXA9O76027 345 aa18.74■□□□□ 0.59
CPSF7-204ENST00000413232 POLBP06746 335 aa18.74■□□□□ 0.59
CPSF7-204ENST00000413232 CCNYL3P0C7X3 344 aa18.74■□□□□ 0.59
CPSF7-204ENST00000413232 RBP3P10745 1247 aa18.74■□□□□ 0.59
CPSF7-204ENST00000413232 CDKN1CP49918 316 aaPredicted RBP18.74■□□□□ 0.59
CPSF7-204ENST00000413232 KPNA2P52292 529 aaKnown RBP18.74■□□□□ 0.59
CPSF7-204ENST00000413232 COPS2P61201 443 aa18.74■□□□□ 0.59
CPSF7-204ENST00000413232 RPS18P62269 152 aaKnown RBP18.74■□□□□ 0.59
CPSF7-204ENST00000413232 FOXK1P85037 733 aa18.74■□□□□ 0.59
CPSF7-204ENST00000413232 TMPRSS15P98073 1019 aa18.74■□□□□ 0.59
CPSF7-204ENST00000413232 LACTB2Q53H82 288 aaPredicted RBP18.74■□□□□ 0.59
CPSF7-204ENST00000413232 DNTTIP2Q5QJE6 756 aaKnown RBP18.74■□□□□ 0.59
CPSF7-204ENST00000413232 CAPRIN2Q6IMN6 1127 aaKnown RBP18.74■□□□□ 0.59
CPSF7-204ENST00000413232 CCDC170Q8IYT3 715 aa18.74■□□□□ 0.59
CPSF7-204ENST00000413232 D2HGDHQ8N465 521 aa18.74■□□□□ 0.59
CPSF7-204ENST00000413232 SLC38A9Q8NBW4 561 aa18.74■□□□□ 0.59
CPSF7-204ENST00000413232 ALG3Q92685 438 aa18.74■□□□□ 0.59
CPSF7-204ENST00000413232 ZNF514Q96K75 400 aaPredicted RBP18.74■□□□□ 0.59
CPSF7-204ENST00000413232 LINC00615Q96LM1 132 aaPredicted RBP18.74■□□□□ 0.59
CPSF7-204ENST00000413232 OSBPL8Q9BZF1 889 aa18.74■□□□□ 0.59
CPSF7-204ENST00000413232 PDE7BQ9NP56 450 aa18.74■□□□□ 0.59
CPSF7-204ENST00000413232 LRRK2Q5S007 2527 aa18.74■□□□□ 0.59
CPSF7-204ENST00000413232 PIPSLA2A3N6 862 aa18.73■□□□□ 0.59
CPSF7-204ENST00000413232 OR6C74A6NCV1 312 aa18.73■□□□□ 0.59
CPSF7-204ENST00000413232 C5orf60A6NFR6 353 aa18.73■□□□□ 0.59
CPSF7-204ENST00000413232 TLCD2A6NGC4 264 aa18.73■□□□□ 0.59
CPSF7-204ENST00000413232 C2orf81A6NN90 581 aa18.73■□□□□ 0.59
CPSF7-204ENST00000413232 KCNN4O15554 427 aa18.73■□□□□ 0.59
CPSF7-204ENST00000413232 DNAJB5O75953 348 aa18.73■□□□□ 0.59
CPSF7-204ENST00000413232 ZNF140P52738 457 aaPredicted RBP18.73■□□□□ 0.59
CPSF7-204ENST00000413232 EIF3EP60228 445 aaKnown RBP18.73■□□□□ 0.59
CPSF7-204ENST00000413232 LAMB3Q13751 1172 aa18.73■□□□□ 0.59
CPSF7-204ENST00000413232 SPA17Q15506 151 aa18.73■□□□□ 0.59
CPSF7-204ENST00000413232 GPR19Q15760 415 aa18.73■□□□□ 0.59
CPSF7-204ENST00000413232 BCL7AQ4VC05 210 aa18.73■□□□□ 0.59
CPSF7-204ENST00000413232 CCDC181Q5TID7 509 aa18.73■□□□□ 0.59
CPSF7-204ENST00000413232 PRAMEF17Q5VTA0 474 aa18.73■□□□□ 0.59
CPSF7-204ENST00000413232 ITPRIPL1Q6GPH6 555 aa18.73■□□□□ 0.59
CPSF7-204ENST00000413232 KLHL35Q6PF15 583 aa18.73■□□□□ 0.59
CPSF7-204ENST00000413232 CFAP206Q8IYR0 622 aa18.73■□□□□ 0.59
CPSF7-204ENST00000413232 TWSG1Q9GZX9 223 aa18.73■□□□□ 0.59
CPSF7-204ENST00000413232 ACTL8Q9H568 366 aa18.73■□□□□ 0.59
CPSF7-204ENST00000413232 KIR3DX1Q9H7L2 352 aa18.73■□□□□ 0.59
CPSF7-204ENST00000413232 KCND3Q9UK17 655 aa18.73■□□□□ 0.59
CPSF7-204ENST00000413232 ACSL5Q9ULC5 683 aa18.73■□□□□ 0.59
CPSF7-204ENST00000413232 POLHQ9Y253 713 aa18.73■□□□□ 0.59
CPSF7-204ENST00000413232 EFR3BQ9Y2G0 817 aa18.73■□□□□ 0.59
CPSF7-204ENST00000413232 EPN1Q9Y6I3 576 aaPredicted RBP18.73■□□□□ 0.59
CPSF7-204ENST00000413232 UBA6A0AVT1 1052 aaPredicted RBP18.72■□□□□ 0.59
CPSF7-204ENST00000413232 MACROD2A1Z1Q3 448 aa18.72■□□□□ 0.59
CPSF7-204ENST00000413232 LDB2O43679 373 aa18.72■□□□□ 0.59
CPSF7-204ENST00000413232 PDGFAP04085 211 aa18.72■□□□□ 0.59
CPSF7-204ENST00000413232 PRSS56P0CW18 603 aa18.72■□□□□ 0.59
CPSF7-204ENST00000413232 PYGMP11217 842 aa18.72■□□□□ 0.59
CPSF7-204ENST00000413232 HSD11B2P80365 405 aa18.72■□□□□ 0.59
CPSF7-204ENST00000413232 ACY1Q03154 408 aa18.72■□□□□ 0.59
CPSF7-204ENST00000413232 SEPT6Q14141 434 aa18.72■□□□□ 0.59
CPSF7-204ENST00000413232 ZNF658BQ4V348 819 aaPredicted RBP18.72■□□□□ 0.59
CPSF7-204ENST00000413232 KMT5CQ86Y97 462 aa18.72■□□□□ 0.59
CPSF7-204ENST00000413232 OR4E2Q8NGC2 313 aa18.72■□□□□ 0.59
CPSF7-204ENST00000413232 ZNF501Q96CX3 271 aaPredicted RBP18.72■□□□□ 0.59
CPSF7-204ENST00000413232 SPATA13Q96N96 652 aa18.72■□□□□ 0.59
CPSF7-204ENST00000413232 FCRL4Q96PJ5 515 aa18.72■□□□□ 0.59
CPSF7-204ENST00000413232 CD180Q99467 661 aa18.72■□□□□ 0.59
CPSF7-204ENST00000413232 TRIM55Q9BYV6 548 aa18.72■□□□□ 0.59
CPSF7-204ENST00000413232 LACRTQ9GZZ8 138 aa18.72■□□□□ 0.59
CPSF7-204ENST00000413232 TLK1Q9UKI8 766 aa18.72■□□□□ 0.59
CPSF7-204ENST00000413232 AAR2Q9Y312 384 aaKnown RBP18.72■□□□□ 0.59
CPSF7-204ENST00000413232 RP1L1Q8IWN7 2480 aaPredicted RBP18.72■□□□□ 0.59
CPSF7-204ENST00000413232 MT-ND3P03897 115 aa18.71■□□□□ 0.59
CPSF7-204ENST00000413232 POLR2CP19387 275 aaPredicted RBP18.71■□□□□ 0.59
CPSF7-204ENST00000413232 CTNNA2P26232 953 aa18.71■□□□□ 0.59
CPSF7-204ENST00000413232 PTPN7P35236 360 aa18.71■□□□□ 0.59
CPSF7-204ENST00000413232 PRLHRP49683 370 aa18.71■□□□□ 0.59
CPSF7-204ENST00000413232 SRSF1Q07955 248 aaKnown RBP eCLIP18.71■□□□□ 0.59
CPSF7-204ENST00000413232 GPS2Q13227 327 aa18.71■□□□□ 0.59
CPSF7-204ENST00000413232 LCN10Q6JVE6 187 aa18.71■□□□□ 0.59
CPSF7-204ENST00000413232 DARS2Q6PI48 645 aaKnown RBP18.71■□□□□ 0.59
CPSF7-204ENST00000413232 OOSP2Q86WS3 158 aa18.71■□□□□ 0.59
CPSF7-204ENST00000413232 CDKL3Q8IVW4 592 aaPredicted RBP18.71■□□□□ 0.59
CPSF7-204ENST00000413232 KLHDC8BQ8IXV7 354 aa18.71■□□□□ 0.59
CPSF7-204ENST00000413232 NXPE1Q8N323 547 aa18.71■□□□□ 0.59
CPSF7-204ENST00000413232 ZFPM2Q8WW38 1151 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms