RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 GULP1Q9UBP9 304 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 ADAMTS6Q9UKP5 1117 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 GPR34Q9UPC5 381 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 TMEM98Q9Y2Y6 226 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 OARD1Q9Y530 152 aa6.53□□□□□ -1.36
VPS41-204ENST00000413141 PCYT1BQ9Y5K3 369 aaPredicted RBP6.53□□□□□ -1.36
VPS41-204ENST00000413141 TRPM6Q9BX84 2022 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 COL6A3P12111 3177 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 IGHV1OR15-9A0A0B4J2B8 117 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 C17orf113A0A1B0GUU1 675 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 SLC5A10A0PJK1 596 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 NCF1BA6NI72 391 aaPredicted RBP6.52□□□□□ -1.37
VPS41-204ENST00000413141 NCF1CA8MVU1 366 aaPredicted RBP6.52□□□□□ -1.37
VPS41-204ENST00000413141 STX16-NPEPL1H3BU86 382 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 CACNB4O00305 520 aaPredicted RBP6.52□□□□□ -1.37
VPS41-204ENST00000413141 STX16O14662 325 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 FPGTO14772 594 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 LIN7AO14910 233 aaPredicted RBP6.52□□□□□ -1.37
VPS41-204ENST00000413141 ITM2AO43736 263 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 SNX3O60493 162 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 NPHS1O60500 1241 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 ZNF217O75362 1048 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 SLCO2B1O94956 709 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 TGDSO95455 350 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 HSPA4LO95757 839 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 IGHV4-34P06331 123 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 C8GP07360 202 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 RPS17P08708 135 aaKnown RBP6.52□□□□□ -1.37
VPS41-204ENST00000413141 ENO2P09104 434 aaPredicted RBP6.52□□□□□ -1.37
VPS41-204ENST00000413141 GFAPP14136 432 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 NCF1P14598 390 aaPredicted RBP6.52□□□□□ -1.37
VPS41-204ENST00000413141 HNRNPA2B1P22626 353 aaKnown RBP6.52□□□□□ -1.37
VPS41-204ENST00000413141 CD6P30203 668 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 OXTRP30559 389 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 SERPINB5P36952 375 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 PREPP48147 710 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 SLC1A6P48664 564 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 CCR5P51681 352 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 NAGLUP54802 743 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 ALDH18A1P54886 795 aaKnown RBP6.52□□□□□ -1.37
VPS41-204ENST00000413141 HERVK_113P63132 956 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 ZXDAP98168 799 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 OVGP1Q12889 678 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 MTAPQ13126 283 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 SETDB1Q15047 1291 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 TGFBIQ15582 683 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 PHKG1Q16816 387 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 PFKFB4Q16877 469 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 ZNF678Q5SXM1 525 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 GKAP1Q5VSY0 366 aaPredicted RBP6.52□□□□□ -1.37
VPS41-204ENST00000413141 KIAA0895LQ68EN5 471 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 ATG14Q6ZNE5 492 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 GCNT7Q6ZNI0 430 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 FRMD7Q6ZUT3 714 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 SPATA21Q7Z572 469 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 PIGWQ7Z7B1 504 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 LRRTM4Q86VH4 590 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 GPSM1Q86YR5 675 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 RASGRP3Q8IV61 690 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 SLC22A15Q8IZD6 547 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 FBXO39Q8N4B4 442 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 LILRA3Q8N6C8 439 aaPredicted RBP6.52□□□□□ -1.37
VPS41-204ENST00000413141 CCNYL1Q8N7R7 359 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 TMEM145Q8NBT3 493 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 PDPRQ8NCN5 879 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 OR2L2Q8NH16 312 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 HM13Q8TCT9 377 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 DLG3Q92796 817 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 TMEM159Q96B96 161 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 GRAMD1AQ96CP6 724 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 PHF21BQ96EK2 531 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 ELAC2Q9BQ52 826 aaKnown RBP6.52□□□□□ -1.37
VPS41-204ENST00000413141 APOOQ9BUR5 198 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 ERVK-6Q9BXR3 956 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 DRC3Q9H069 523 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 GSTO2Q9H4Y5 243 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 C6orf106Q9H6K1 298 aaPredicted RBP6.52□□□□□ -1.37
VPS41-204ENST00000413141 COG4Q9H9E3 785 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 NPHS2Q9NP85 383 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 ACSS2Q9NR19 701 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 WSB2Q9NYS7 404 aaPredicted RBP6.52□□□□□ -1.37
VPS41-204ENST00000413141 KLHL14Q9P2G3 628 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 FAM8A1Q9UBU6 413 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 TMCO1Q9UM00 188 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 SLC17A4Q9Y2C5 497 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 CA5BQ9Y2D0 317 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 SIT1Q9Y3P8 196 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 PIKFYVEQ9Y2I7 2098 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 PLXND1Q9Y4D7 1925 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 NUMA1Q14980 2115 aa6.52□□□□□ -1.37
VPS41-204ENST00000413141 POM121BA6NF01 834 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 MGAT4DA6NG13 374 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 LRRC14BA6NHZ5 514 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 H0Y8X5 98 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 K7ESF4 209 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 KMOO15229 486 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 SLC16A5O15375 505 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 FFAR2O15552 330 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 GRID2O43424 1007 aa6.51□□□□□ -1.37
VPS41-204ENST00000413141 SNX2O60749 519 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms