RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 ANGEL2Q5VTE6 544 aaKnown RBP5.17□□□□□ -1.58
HERC4-205ENST00000412272 MLIPQ5VWP3 458 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 SLC25A25Q6KCM7 469 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 CYP4F22Q6NT55 531 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 PMF1Q6P1K2 205 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 INTS5Q6P9B9 1019 aaKnown RBP5.17□□□□□ -1.58
HERC4-205ENST00000412272 DYMQ7RTS9 669 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 C16orf62Q7Z3J2 963 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 CAMKMTQ7Z624 323 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 METTL4Q8N3J2 472 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 C12orf29Q8N999 325 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 PLA2G15Q8NCC3 412 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 OR6Q1Q8NGQ2 317 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 RAB2BQ8WUD1 216 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 BIRC7Q96CA5 298 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 CLUHP3Q96NS8 147 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 MED18Q9BUE0 208 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 TEX12Q9BXU0 123 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 UNKLQ9H9P5 680 aaKnown RBP5.17□□□□□ -1.58
HERC4-205ENST00000412272 ANKHQ9HCJ1 492 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 EPHA6Q9UF33 1036 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 PISDQ9UG56 409 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 KCNH4Q9UQ05 1017 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 NDUFAF1Q9Y375 327 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 NAALAD2Q9Y3Q0 740 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 POM121BA6NF01 834 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 F5H6K3 240 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 POC1B-GALNT4F8VUJ3 575 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 J3QW42 95 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 NDUFS8O00217 210 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 SCAMP1O15126 338 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 EFSO43281 561 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 TNNC2P02585 160 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 ENO1P06733 434 aaKnown RBP5.17□□□□□ -1.58
HERC4-205ENST00000412272 ADRB1P08588 477 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 RRASP10301 218 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 MYL2P10916 166 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 KRT15P19012 456 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 RFX1P22670 979 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 WARSP23381 471 aaKnown RBP5.17□□□□□ -1.58
HERC4-205ENST00000412272 MYF6P23409 242 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 FPR3P25089 353 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 KLRC2P26717 231 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 MSX1P28360 303 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 HIBADHP31937 336 aaKnown RBP5.17□□□□□ -1.58
HERC4-205ENST00000412272 IRS1P35568 1242 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 NUMBP49757 651 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 RBP5P82980 135 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 TAP2Q03519 686 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 LMAN2Q12907 356 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 POLD3Q15054 466 aaPredicted RBP5.17□□□□□ -1.58
HERC4-205ENST00000412272 TMED2Q15363 201 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 CA9Q16790 459 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 SWI5Q1ZZU3 235 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 ZNF181Q2M3W8 571 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 RFX4Q33E94 735 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 ZIK1Q3SY52 487 aaPredicted RBP5.17□□□□□ -1.58
HERC4-205ENST00000412272 RUNDC3AQ59EK9 446 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 PABPC1L2AQ5JQF8 200 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 CCNYL2Q5T2Q4 361 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 LIPJQ5W064 366 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 SMYD5Q6GMV2 418 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 MAMDC4Q6UXC1 1216 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 SLC24A5Q71RS6 500 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 TPRA1Q86W33 373 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 SCML4Q8N228 414 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 POC5Q8NA72 575 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 CPEB3Q8NE35 698 aaKnown RBP5.17□□□□□ -1.58
HERC4-205ENST00000412272 OR8J2Q8NGG1 315 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 SFT2D1Q8WV19 159 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 WFDC12Q8WWY7 111 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 SGCZQ96LD1 299 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 EYA3Q99504 573 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 SSX3Q99909 188 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 TRIM2Q9C040 744 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 POLR1BQ9H9Y6 1135 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 RANGRFQ9HD47 186 aaPredicted RBP5.17□□□□□ -1.58
HERC4-205ENST00000412272 TMEM39AQ9NV64 488 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 COPG2Q9UBF2 871 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 CHORDC1Q9UHD1 332 aaPredicted RBP5.17□□□□□ -1.58
HERC4-205ENST00000412272 FBXO5Q9UKT4 447 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 MGAT4AQ9UM21 535 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 TLR6Q9Y2C9 796 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 PCDHA2Q9Y5H9 948 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 KCNMB2Q9Y691 235 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 SPATA31A5Q5VU36 1347 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 FAM205AQ6ZU69 1335 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 SPATA31A7Q8IWB4 1347 aa5.17□□□□□ -1.58
HERC4-205ENST00000412272 CHD5Q8TDI0 1954 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 A0A0G2JND7 137 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 NPC1O15118 1278 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 ANGPT2O15123 496 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 MATN3O15232 486 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 SLC16A3O15427 465 aaKnown RBP5.16□□□□□ -1.58
HERC4-205ENST00000412272 DFNA5O60443 496 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 LY86O95711 162 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 ADRB3P13945 408 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 NSFP46459 744 aaKnown RBP5.16□□□□□ -1.58
HERC4-205ENST00000412272 GTF2A2P52657 109 aa5.16□□□□□ -1.58
HERC4-205ENST00000412272 ARSFP54793 590 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms