RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 TRIM16O95361 564 aa16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 CSF2P04141 144 aa16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 NME1P15531 152 aaKnown RBP16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 JUNDP17535 347 aa16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 DGKAP23743 735 aa16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 SLCO1A2P46721 670 aa16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 HNRNPKP61978 463 aaKnown RBP eCLIP16.22■□□□□ 0.198e-6■■■■□ 19.7
TSPAN4-208ENST00000409531 PLOD1Q02809 727 aaPredicted RBP16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 EIF2B5Q13144 721 aaKnown RBP16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 USP10Q14694 798 aaKnown RBP16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 TMED2Q15363 201 aa16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 INSCQ1MX18 579 aa16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 KRT71Q3SY84 523 aa16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 ZNF542PQ5EBM4 170 aa16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 RBM20Q5T481 1227 aaKnown RBP16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 MROH9Q5TGP6 573 aa16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 OTOAQ7RTW8 1153 aa16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 AMZ2Q86W34 360 aa16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 ZNF547Q8IVP9 402 aa16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 PHACTR4Q8IZ21 702 aa16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 SLC25A45Q8N413 288 aa16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 OR2L2Q8NH16 312 aa16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 NDNQ99608 321 aa16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 ACBD3Q9H3P7 528 aa16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 LATS2Q9NRM7 1088 aa16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 KLHL42Q9P2K6 505 aa16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 SLC39A10Q9ULF5 831 aa16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 MTO1Q9Y2Z2 717 aaKnown RBP16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 MGAT4DA6NG13 374 aa16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 GOLGA6L10A6NI86 522 aa16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 LIN7AO14910 233 aaPredicted RBP16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 TNFSF14O43557 240 aa16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 SDC3O75056 442 aa16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 NIPSNAP2O75323 286 aa16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 POP7O75817 140 aaKnown RBP16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 PIAS2O75928 621 aa16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 FUCA1P04066 466 aa16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 CTSEP14091 401 aa16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 STMN1P16949 149 aa16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 FDXRP22570 491 aa16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 SERPINB8P50452 374 aa16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 ZNF844Q08AG5 666 aa16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 PDAP1Q13442 181 aaKnown RBP16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 TTLL9Q3SXZ7 439 aa16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 CEP85LQ5SZL2 805 aa16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 CHST15Q7LFX5 561 aaPredicted RBP16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 CCDC91Q7Z6B0 441 aa16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 C11orf96Q7Z7L8 435 aa16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 EID2Q8N6I1 236 aa16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 BEND7Q8N7W2 519 aaPredicted RBP16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 HM13Q8TCT9 377 aa16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 ELMO1Q92556 727 aa16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 POPDC3Q9HBV1 291 aa16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 APOBEC3BQ9UH17 382 aaKnown RBP16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 TBK1Q9UHD2 729 aa16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 LGALS13Q9UHV8 139 aa16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 TRMT6Q9UJA5 497 aaKnown RBP16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 PRKAB1Q9Y478 270 aa16.21■□□□□ 0.19
TSPAN4-208ENST00000409531 CACNA1GO43497 2377 aa16.21■□□□□ 0.18
TSPAN4-208ENST00000409531 NEMP2A6NFY4 417 aa16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 IQCF5A8MTL0 148 aa16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 TRIM49D1C9J1S8 452 aa16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 APOA4P06727 396 aa16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 ACP5P13686 325 aa16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 SAT1P21673 171 aa16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 AOAHP28039 575 aa16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 CRABP2P29373 138 aa16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 PBLDP30039 288 aaPredicted RBP16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 CDKN2DP55273 166 aa16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 RAB10P61026 200 aa16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 DMPKQ09013 629 aa16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 ILF3Q12906 894 aaKnown RBP eCLIP16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 BMPR2Q13873 1038 aa16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 ELOCQ15369 112 aa16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 SYTL3Q4VX76 610 aa16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 PLEKHS1Q5SXH7 462 aa16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 KRT222Q8N1A0 295 aa16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 SDR16C5Q8N3Y7 309 aa16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 FSTL5Q8N475 847 aaPredicted RBP16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 NAT14Q8WUY8 206 aa16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 ASZ1Q8WWH4 475 aa16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 TMEM159Q96B96 161 aa16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 GPR21Q99679 349 aa16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 SARS2Q9NP81 518 aaKnown RBP16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 FTSJ1Q9UET6 329 aa16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 KLF15Q9UIH9 416 aa16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 APOBEC2Q9Y235 224 aaKnown RBP16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 DHRS7Q9Y394 339 aa16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 ARHGEF17Q96PE2 2063 aaPredicted RBP16.2■□□□□ 0.18
TSPAN4-208ENST00000409531 LDOC1O95751 146 aaPredicted RBP16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 MYZAPP0CAP1 466 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 ITGB6P18564 788 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 KRT15P19012 456 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 TYK2P29597 1187 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 ATP5DP30049 168 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 CCR7P32248 378 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 CLCN7P51798 805 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 CLCNKAP51800 687 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 TAS2R39P59534 338 aa16.19■□□□□ 0.18
TSPAN4-208ENST00000409531 RPA4Q13156 261 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms