RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 RELTQ969Z4 430 aa12.5□□□□□ -0.41
CHRNA1-203ENST00000409219 DPH2Q9BQC3 489 aaPredicted RBP12.5□□□□□ -0.41
CHRNA1-203ENST00000409219 CBX8Q9HC52 389 aa12.5□□□□□ -0.41
CHRNA1-203ENST00000409219 IMP3Q9NV31 184 aaKnown RBP12.5□□□□□ -0.41
CHRNA1-203ENST00000409219 RBM22Q9NW64 420 aaKnown RBP eCLIP12.5□□□□□ -0.41
CHRNA1-203ENST00000409219 P4HTMQ9NXG6 502 aa12.5□□□□□ -0.41
CHRNA1-203ENST00000409219 SHOC2Q9UQ13 582 aa12.5□□□□□ -0.41
CHRNA1-203ENST00000409219 CFAP20Q9Y6A4 193 aaKnown RBP12.5□□□□□ -0.41
CHRNA1-203ENST00000409219 ANKRD12Q6UB98 2062 aa12.5□□□□□ -0.41
CHRNA1-203ENST00000409219 OR6C74A6NCV1 312 aa12.49□□□□□ -0.41
CHRNA1-203ENST00000409219 SLC9B1P1A6NJY1 282 aa12.49□□□□□ -0.41
CHRNA1-203ENST00000409219 TMCO5BA8MYB1 307 aa12.49□□□□□ -0.41
CHRNA1-203ENST00000409219 PEX12O00623 359 aa12.49□□□□□ -0.41
CHRNA1-203ENST00000409219 IGHEP01854 428 aa12.49□□□□□ -0.41
CHRNA1-203ENST00000409219 MMP2P08253 660 aa12.49□□□□□ -0.41
CHRNA1-203ENST00000409219 PIRTP0C851 137 aa12.49□□□□□ -0.41
CHRNA1-203ENST00000409219 MSL3P1P0C860 447 aa12.49□□□□□ -0.41
CHRNA1-203ENST00000409219 MTHFD1P11586 935 aaKnown RBP12.49□□□□□ -0.41
CHRNA1-203ENST00000409219 BPIP17213 487 aa12.49□□□□□ -0.41
CHRNA1-203ENST00000409219 FOXL2P58012 376 aa12.49□□□□□ -0.41
CHRNA1-203ENST00000409219 TMEM115Q12893 351 aaPredicted RBP12.49□□□□□ -0.41
CHRNA1-203ENST00000409219 TXNRD3NBQ6F5E7 133 aa12.49□□□□□ -0.41
CHRNA1-203ENST00000409219 FAM83HQ6ZRV2 1179 aaPredicted RBP12.49□□□□□ -0.41
CHRNA1-203ENST00000409219 LRRC49Q8IUZ0 686 aa12.49□□□□□ -0.41
CHRNA1-203ENST00000409219 TMEM151BQ8IW70 566 aa12.49□□□□□ -0.41
CHRNA1-203ENST00000409219 PARP9Q8IXQ6 854 aa12.49□□□□□ -0.41
CHRNA1-203ENST00000409219 ZNF295-AS1Q8N0V1 137 aa12.49□□□□□ -0.41
CHRNA1-203ENST00000409219 VPS35Q96QK1 796 aa12.49□□□□□ -0.41
CHRNA1-203ENST00000409219 SYT11Q9BT88 431 aa12.49□□□□□ -0.41
CHRNA1-203ENST00000409219 SLC7A5P2Q9GIP4 190 aa12.49□□□□□ -0.41
CHRNA1-203ENST00000409219 PCDH18Q9HCL0 1135 aa12.49□□□□□ -0.41
CHRNA1-203ENST00000409219 ANO10Q9NW15 660 aa12.49□□□□□ -0.41
CHRNA1-203ENST00000409219 AMACRQ9UHK6 382 aa12.49□□□□□ -0.41
CHRNA1-203ENST00000409219 POMT2Q9UKY4 750 aa12.49□□□□□ -0.41
CHRNA1-203ENST00000409219 PTRH2Q9Y3E5 179 aaKnown RBP12.49□□□□□ -0.41
CHRNA1-203ENST00000409219 MATN3O15232 486 aa12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 ZNF749O43361 778 aa12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 RARAP10276 462 aa12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 CDH3P22223 829 aa12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 HTR1EP28566 365 aa12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 PCK1P35558 622 aa12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 FOLR3P41439 243 aa12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 CD86P42081 329 aa12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 LMAN1P49257 510 aa12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 ADCY2Q08462 1091 aa12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 GALNT2Q10471 571 aa12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 CDC16Q13042 620 aa12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 NFE2L1Q14494 772 aa12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 ZNF169Q14929 603 aaPredicted RBP12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 ZNF630Q2M218 657 aaPredicted RBP12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 ATP13A5Q4VNC0 1218 aa12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 B3GNTL1Q67FW5 361 aaPredicted RBP12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 IGFL2Q6UWQ7 119 aa12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 B4GALNT4Q76KP1 1039 aa12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 TMC3Q7Z5M5 1100 aa12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 PPP1R32Q7Z5V6 425 aa12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 AMZ2Q86W34 360 aa12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 SYTL2Q9HCH5 934 aa12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 CHST11Q9NPF2 352 aa12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 RAD18Q9NS91 495 aa12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 ZNF711Q9Y462 761 aa12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 ABCA2Q9BZC7 2435 aa12.48□□□□□ -0.41
CHRNA1-203ENST00000409219 E7EQ34 232 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 KCNJ13O60928 360 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 CNOT3O75175 753 aaKnown RBP12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 JRKO75564 520 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 CBSLP0DN79 551 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 POLR2CP19387 275 aaPredicted RBP12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 AGXTP21549 392 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 CBSP35520 551 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 PREPP48147 710 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 CTSCP53634 463 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 KRTAP10-9P60411 292 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 OTUD4Q01804 1114 aaKnown RBP12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 MMRN1Q13201 1228 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 XRCC4Q13426 336 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 GTF2H3Q13889 308 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 IQCB1Q15051 598 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 KRT31Q15323 416 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 MLIPQ5VWP3 458 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 TIGD7Q6NT04 549 aaPredicted RBP12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 ARMC6Q6NXE6 501 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 FAM180AQ6UWF9 173 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 LUZP1Q86V48 1076 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 DNAJB14Q8TBM8 379 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 COG1Q8WTW3 980 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 LRRN4Q8WUT4 740 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 CCDC120Q96HB5 630 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 CNDP1Q96KN2 507 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 GBP5Q96PP8 586 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 TRIB3Q96RU7 358 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 INSM2Q96T92 566 aaPredicted RBP12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 ADGRE3Q9BY15 652 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 KIR3DX1Q9H7L2 352 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 ATP13A2Q9NQ11 1180 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 RTN4Q9NQC3 1192 aaKnown RBP12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 C1GALT1Q9NS00 363 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 SLC24A2Q9UI40 661 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 ZKSCAN5Q9Y2L8 839 aa12.47□□□□□ -0.41
CHRNA1-203ENST00000409219 CCDC78A2IDD5 438 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms