RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 SGF29Q96ES7 293 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 SLC25A23Q9BV35 468 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 TDRD1Q9BXT4 1180 aaKnown RBP12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 ALG9Q9H6U8 611 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 WDR55Q9H6Y2 383 aaPredicted RBP12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 ABCB8Q9NUT2 735 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 C6orf203Q9P0P8 240 aaPredicted RBP12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 KIAA1522Q9P206 1035 aaPredicted RBP12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 POMPQ9Y244 141 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 SLC27A6Q9Y2P4 619 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 PKP3Q9Y446 797 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 RAI2Q9Y5P3 530 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 ARL5AQ9Y689 179 aa12.74□□□□□ -0.37
SMARCB1-203ENST00000407082 A0A0D9SEW6 157 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 ANKRD66B4E2M5 251 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 STX16-NPEPL1H3BU86 382 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 CBX4O00257 560 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 STX16O14662 325 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 PEX1O43933 1283 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 KERAO60938 352 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 CHEK2O96017 543 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 SLC4A1P02730 911 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 ZNF37AP17032 561 aaPredicted RBP12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 ME2P23368 584 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 CD70P32970 193 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 CSNK1DP48730 415 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 ACADVLP49748 655 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 ARSDP51689 593 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 ADARP55265 1226 aaKnown RBP12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 CDKN2DP55273 166 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 SULT2A1Q06520 285 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 GALNT3Q14435 633 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 CYTH1Q15438 398 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 ZNF423Q2M1K9 1284 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 ANKS6Q68DC2 871 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 RETSATQ6NUM9 610 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 HACD2Q6Y1H2 254 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 ATG14Q6ZNE5 492 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 PIP4P1Q86T03 277 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 DSELQ8IZU8 1212 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 DEFB119Q8N690 84 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 PNPLA1Q8N8W4 532 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 TERB1Q8NA31 727 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 PCYOX1LQ8NBM8 494 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 MDGA1Q8NFP4 955 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 FBXO27Q8NI29 283 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 SLC26A7Q8TE54 656 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 CATSPER2Q96P56 530 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 BBC3Q96PG8 261 aaPredicted RBP12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 TMEM45AQ9NWC5 275 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 CRYL1Q9Y2S2 319 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 PCDHB9Q9Y5E1 797 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 PCDHB1Q9Y5F3 818 aa12.73□□□□□ -0.37
SMARCB1-203ENST00000407082 UBA6A0AVT1 1052 aaPredicted RBP12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 MAGEA13PA6NCF6 341 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 ANTXRLA6NF34 631 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 H3BMM5 538 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 PSMD12O00232 456 aaPredicted RBP12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 MUSKO15146 869 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 MLYCDO95822 493 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 ESR1P03372 595 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 PABPC1P11940 636 aaKnown RBP12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 GFAPP14136 432 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 PKMP14618 531 aaKnown RBP12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 ITPKAP23677 461 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 TNFRSF4P43489 277 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 CLCN2P51788 898 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 GEN1Q17RS7 908 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 SPATS1Q496A3 300 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 ZNF789Q5FWF6 425 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 LYSMD4Q5XG99 296 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 CXorf57Q6NSI4 855 aaKnown RBP12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 PRMT9Q6P2P2 845 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 NCEH1Q6PIU2 408 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 DHDDSQ86SQ9 333 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 SFTPA1Q8IWL2 248 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 PELI3Q8N2H9 469 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 FBXO39Q8N4B4 442 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 OR4K2Q8NGD2 314 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 OR52K2Q8NGK3 314 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 OR2I1PQ8NGU4 316 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 TSPEARQ8WU66 669 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 PHF21BQ96EK2 531 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 CLPTM1LQ96KA5 538 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 LMLNQ96KR4 655 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 SPACA7Q96KW9 195 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 C2orf49Q9BVC5 232 aaPredicted RBP12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 KLHL4Q9C0H6 718 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 GSTO2Q9H4Y5 243 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 Q9H521 79 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 CXorf56Q9H5V9 222 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 WDR41Q9HAD4 459 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 MAGEE1Q9HCI5 957 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 MARCH4Q9P2E8 410 aaPredicted RBP12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 SCOCQ9UIL1 159 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 TRMT6Q9UJA5 497 aaKnown RBP12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 RNF112Q9ULX5 631 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 PSMD13Q9UNM6 376 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 RAXQ9Y2V3 346 aa12.72□□□□□ -0.37
SMARCB1-203ENST00000407082 COPG1Q9Y678 874 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms