RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 AURKBQ96GD4 344 aaPredicted RBP19.54■□□□□ 0.72
CCDC47-202ENST00000403162 ZNF382Q96SR6 550 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 HPS4Q9NQG7 708 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 GALPQ9UBC7 116 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 PSME2Q9UL46 239 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 COQ6Q9Y2Z9 468 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 NCF1BA6NI72 391 aaPredicted RBP19.54■□□□□ 0.72
CCDC47-202ENST00000403162 NCF1CA8MVU1 366 aaPredicted RBP19.54■□□□□ 0.72
CCDC47-202ENST00000403162 ATP6V1G1O75348 118 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 NDUFS3O75489 264 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 GALTP07902 379 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 ANXA6P08133 673 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 OR4Q2P0C623 313 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 NCF1P14598 390 aaPredicted RBP19.54■□□□□ 0.72
CCDC47-202ENST00000403162 TCF3P15923 654 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 CRHBPP24387 322 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 ACVRL1P37023 503 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 EFEMP1Q12805 493 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 CBX3Q13185 183 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 SKIV2LQ15477 1246 aaKnown RBP19.54■□□□□ 0.72
CCDC47-202ENST00000403162 TRIP4Q15650 581 aaPredicted RBP19.54■□□□□ 0.72
CCDC47-202ENST00000403162 SPOUT1Q5T280 376 aaKnown RBP19.54■□□□□ 0.72
CCDC47-202ENST00000403162 Q6ZSR9 355 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 RALGPS2Q86X27 583 aaPredicted RBP19.54■□□□□ 0.72
CCDC47-202ENST00000403162 AADATQ8N5Z0 425 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 ITFG1Q8TB96 612 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 HDAC2Q92769 488 aaKnown RBP19.54■□□□□ 0.72
CCDC47-202ENST00000403162 ZNF689Q96CS4 500 aaPredicted RBP19.54■□□□□ 0.72
CCDC47-202ENST00000403162 YME1L1Q96TA2 773 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 TMEM175Q9BSA9 504 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 COMMD8Q9NX08 183 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 ABI2Q9NYB9 513 aaPredicted RBP19.54■□□□□ 0.72
CCDC47-202ENST00000403162 CXXC1Q9P0U4 656 aaPredicted RBP19.54■□□□□ 0.72
CCDC47-202ENST00000403162 PCDHB8Q9UN66 801 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 B3GNT3Q9Y2A9 372 aa19.54■□□□□ 0.72
CCDC47-202ENST00000403162 NT5C1B-RDH14C9J2C7 533 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 IFRD1O00458 451 aaPredicted RBP19.53■□□□□ 0.72
CCDC47-202ENST00000403162 E2F3O00716 465 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 TSPAN12O95859 305 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 GGT1P19440 569 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 CD9P21926 228 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 PSMA3P25788 255 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 MAPKAPK2P49137 400 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 KCNC4Q03721 635 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 GTF2IRD2BQ6EKJ0 949 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 GTF2IRD2Q86UP8 949 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 CIR1Q86X95 450 aaPredicted RBP19.53■□□□□ 0.72
CCDC47-202ENST00000403162 C8orf59Q8N0T1 100 aaPredicted RBP19.53■□□□□ 0.72
CCDC47-202ENST00000403162 CLEC4FQ8N1N0 589 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 CENPSQ8N2Z9 138 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 CCDC115Q96NT0 180 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 CGREF1Q99674 301 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 LHPPQ9H008 270 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 PDFQ9HBH1 243 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 FUOMA2VDF0 154 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 SULT1C4O75897 302 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 RSL1D1O76021 490 aaKnown RBP19.53■□□□□ 0.72
CCDC47-202ENST00000403162 CLPXO76031 633 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 OR4F21O95013 312 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 OR1E1P30953 314 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 HK3P52790 923 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 CHRNB3Q05901 458 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 SDHAF4Q5VUM1 108 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 TTC23Q5W5X9 447 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 FKBP9P1Q75LS8 142 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 C8orf48Q96LL4 319 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 RPRD1AQ96P16 312 aaPredicted RBP19.53■□□□□ 0.72
CCDC47-202ENST00000403162 CWH43Q9H720 699 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 VPS9D1Q9Y2B5 631 aa19.53■□□□□ 0.72
CCDC47-202ENST00000403162 C16orf96A6NNT2 1141 aa19.52■□□□□ 0.72
CCDC47-202ENST00000403162 VPS26AO75436 327 aa19.52■□□□□ 0.72
CCDC47-202ENST00000403162 ALDH7A1P49419 539 aaKnown RBP19.52■□□□□ 0.72
CCDC47-202ENST00000403162 RELAQ04206 551 aa19.52■□□□□ 0.72
CCDC47-202ENST00000403162 EPS8Q12929 822 aa19.52■□□□□ 0.72
CCDC47-202ENST00000403162 SELPLGQ14242 412 aa19.52■□□□□ 0.72
CCDC47-202ENST00000403162 STK32CQ86UX6 486 aa19.52■□□□□ 0.72
CCDC47-202ENST00000403162 GPSM1Q86YR5 675 aa19.52■□□□□ 0.72
CCDC47-202ENST00000403162 SLC15A4Q8N697 577 aa19.52■□□□□ 0.72
CCDC47-202ENST00000403162 OR8J3Q8NGG0 315 aa19.52■□□□□ 0.72
CCDC47-202ENST00000403162 SLC22A17Q8WUG5 538 aa19.52■□□□□ 0.72
CCDC47-202ENST00000403162 PPM1MQ96MI6 270 aa19.52■□□□□ 0.72
CCDC47-202ENST00000403162 MARCH5Q9NX47 278 aa19.52■□□□□ 0.72
CCDC47-202ENST00000403162 SEPT3Q9UH03 358 aa19.52■□□□□ 0.72
CCDC47-202ENST00000403162 EIF2B4Q9UI10 523 aaKnown RBP19.52■□□□□ 0.72
CCDC47-202ENST00000403162 SPO11Q9Y5K1 396 aa19.52■□□□□ 0.72
CCDC47-202ENST00000403162 ST14Q9Y5Y6 855 aa19.52■□□□□ 0.72
CCDC47-202ENST00000403162 ANKRD12Q6UB98 2062 aa19.52■□□□□ 0.72
CCDC47-202ENST00000403162 COL4A6Q14031 1691 aa19.52■□□□□ 0.71
CCDC47-202ENST00000403162 MTHFRP42898 656 aa19.51■□□□□ 0.71
CCDC47-202ENST00000403162 PSMD7P51665 324 aa19.51■□□□□ 0.71
CCDC47-202ENST00000403162 MTPNP58546 118 aa19.51■□□□□ 0.71
CCDC47-202ENST00000403162 GABARAPL2P60520 117 aa19.51■□□□□ 0.71
CCDC47-202ENST00000403162 PWP1Q13610 501 aa19.51■□□□□ 0.71
CCDC47-202ENST00000403162 PTPRNQ16849 979 aa19.51■□□□□ 0.71
CCDC47-202ENST00000403162 R3HCC1LQ7Z5L2 792 aaKnown RBP19.51■□□□□ 0.71
CCDC47-202ENST00000403162 ZDHHC13Q8IUH4 622 aa19.51■□□□□ 0.71
CCDC47-202ENST00000403162 CDYL2Q8N8U2 506 aa19.51■□□□□ 0.71
CCDC47-202ENST00000403162 OR4K2Q8NGD2 314 aa19.51■□□□□ 0.71
CCDC47-202ENST00000403162 TOR3AQ9H497 397 aa19.51■□□□□ 0.71
CCDC47-202ENST00000403162 ACTL8Q9H568 366 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms