RNA–Protein interactions for RNA: ENST00000402203.5

TNRC6B-203, Transcript of trinucleotide repeat containing 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNRC6B, Length 3,444 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-203ENST00000402203 ZBTB46Q86UZ6 589 aa13.1□□□□□ -0.31
TNRC6B-203ENST00000402203 FAM86B1Q8N7N1 296 aa13.1□□□□□ -0.31
TNRC6B-203ENST00000402203 FAM47BQ8NA70 645 aa13.1□□□□□ -0.31
TNRC6B-203ENST00000402203 CDC26Q8NHZ8 85 aa13.1□□□□□ -0.31
TNRC6B-203ENST00000402203 RNF145Q96MT1 663 aa13.1□□□□□ -0.31
TNRC6B-203ENST00000402203 TCF12Q99081 682 aa13.1□□□□□ -0.31
TNRC6B-203ENST00000402203 IKZF5Q9H5V7 419 aa13.1□□□□□ -0.31
TNRC6B-203ENST00000402203 RPF2Q9H7B2 306 aaKnown RBP13.1□□□□□ -0.31
TNRC6B-203ENST00000402203 KNL1Q8NG31 2342 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 HIDE1A8MVS5 230 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 KIF1CO43896 1103 aaKnown RBP13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 DFNA5O60443 496 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 ITPKAP23677 461 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 SLC7A1P30825 629 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 MAPK10P53779 464 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 ZXDCQ2QGD7 858 aaPredicted RBP13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 MYLK3Q32MK0 819 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 TMEM214Q6NUQ4 689 aaKnown RBP13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 TBPL2Q6SJ96 375 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 CRTC1Q6UUV9 634 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 TOP1MTQ969P6 601 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 PBXIP1Q96AQ6 731 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 VPS50Q96JG6 964 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 BBS2Q9BXC9 721 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 SLC6A13Q9NSD5 602 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 SARDHQ9UL12 918 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 COL4A6Q14031 1691 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 ATG2BQ96BY7 2078 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 A0A1W2PP18 115 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 STAMBPO95630 424 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 ESR1P03372 595 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 ACADVLP49748 655 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 PLEKHG6Q3KR16 790 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 KLHDC10Q6PID8 442 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 CYP20A1Q6UW02 462 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 RNF168Q8IYW5 571 aaPredicted RBP13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 HS3ST5Q8IZT8 346 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 LILRA3Q8N6C8 439 aaPredicted RBP13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 MAGEE2Q8TD90 523 aaPredicted RBP13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 ING5Q8WYH8 240 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 SUN2Q9UH99 717 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 BCAP29Q9UHQ4 241 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 OR2AG2A6NM03 316 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 HTRA2O43464 458 aaPredicted RBP13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 EFEMP2O95967 443 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 FAM58BPP0C7Q3 252 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 ZNF7P17097 686 aaPredicted RBP13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 NFKBIAP25963 317 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 MARVELD2Q8N4S9 558 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 MRPS31Q92665 395 aaKnown RBP13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 PEX13Q92968 403 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 BTBD9Q96Q07 612 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 C2orf49Q9BVC5 232 aaPredicted RBP13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 POPDC3Q9HBV1 291 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 VPS4AQ9UN37 437 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 PCDHA9Q9Y5H5 950 aa13.09□□□□□ -0.31
TNRC6B-203ENST00000402203 LEFTY2O00292 366 aa13.08□□□□□ -0.32
TNRC6B-203ENST00000402203 DENRO43583 198 aaKnown RBP13.08□□□□□ -0.32
TNRC6B-203ENST00000402203 C8AP07357 584 aa13.08□□□□□ -0.32
TNRC6B-203ENST00000402203 KRT80Q6KB66 452 aa13.08□□□□□ -0.32
TNRC6B-203ENST00000402203 RETSATQ6NUM9 610 aa13.08□□□□□ -0.32
TNRC6B-203ENST00000402203 GALNT10Q86SR1 603 aa13.08□□□□□ -0.32
TNRC6B-203ENST00000402203 C10orf111Q8N326 155 aa13.08□□□□□ -0.32
TNRC6B-203ENST00000402203 SPG21Q9NZD8 308 aa13.08□□□□□ -0.32
TNRC6B-203ENST00000402203 EI24O14681 340 aa13.08□□□□□ -0.32
TNRC6B-203ENST00000402203 SEC22BO75396 215 aa13.08□□□□□ -0.32
TNRC6B-203ENST00000402203 HSPA8P11142 646 aaKnown RBP13.08□□□□□ -0.32
TNRC6B-203ENST00000402203 SRCP12931 536 aa13.08□□□□□ -0.32
TNRC6B-203ENST00000402203 B4GALNT1Q00973 533 aa13.08□□□□□ -0.32
TNRC6B-203ENST00000402203 TRAF3Q13114 568 aa13.08□□□□□ -0.32
TNRC6B-203ENST00000402203 TSTA3Q13630 321 aaPredicted RBP13.08□□□□□ -0.32
TNRC6B-203ENST00000402203 RAB33AQ14088 237 aa13.08□□□□□ -0.32
TNRC6B-203ENST00000402203 FAM174BQ3ZCQ3 159 aa13.08□□□□□ -0.32
TNRC6B-203ENST00000402203 XKR7Q5GH72 579 aa13.08□□□□□ -0.32
TNRC6B-203ENST00000402203 ZFP28Q8NHY6 868 aa13.08□□□□□ -0.32
TNRC6B-203ENST00000402203 FBXO30Q8TB52 745 aa13.08□□□□□ -0.32
TNRC6B-203ENST00000402203 FIG4Q92562 907 aa13.08□□□□□ -0.32
TNRC6B-203ENST00000402203 EGLN2Q96KS0 407 aa13.08□□□□□ -0.32
TNRC6B-203ENST00000402203 SMOXQ9NWM0 555 aa13.08□□□□□ -0.32
TNRC6B-203ENST00000402203 COMMD8Q9NX08 183 aa13.08□□□□□ -0.32
TNRC6B-203ENST00000402203 DUS2Q9NX74 493 aaKnown RBP13.08□□□□□ -0.32
TNRC6B-203ENST00000402203 VAPAQ9P0L0 249 aa13.08□□□□□ -0.32
TNRC6B-203ENST00000402203 CXCL14O95715 111 aa13.07□□□□□ -0.32
TNRC6B-203ENST00000402203 MLYCDO95822 493 aa13.07□□□□□ -0.32
TNRC6B-203ENST00000402203 LRG1P02750 347 aa13.07□□□□□ -0.32
TNRC6B-203ENST00000402203 CXCL10P02778 98 aa13.07□□□□□ -0.32
TNRC6B-203ENST00000402203 S100BP04271 92 aaPredicted RBP13.07□□□□□ -0.32
TNRC6B-203ENST00000402203 ITGALP20701 1170 aa13.07□□□□□ -0.32
TNRC6B-203ENST00000402203 CCR7P32248 378 aa13.07□□□□□ -0.32
TNRC6B-203ENST00000402203 PTSQ03393 145 aa13.07□□□□□ -0.32
TNRC6B-203ENST00000402203 DDX39BQ13838 428 aaKnown RBP13.07□□□□□ -0.32
TNRC6B-203ENST00000402203 INO80DQ53TQ3 878 aaPredicted RBP13.07□□□□□ -0.32
TNRC6B-203ENST00000402203 ZNF786Q8N393 782 aa13.07□□□□□ -0.32
TNRC6B-203ENST00000402203 MAGEE1Q9HCI5 957 aa13.07□□□□□ -0.32
TNRC6B-203ENST00000402203 ZNF490Q9ULM2 529 aaPredicted RBP13.07□□□□□ -0.32
TNRC6B-203ENST00000402203 TMEM202A6NGA9 273 aa13.07□□□□□ -0.32
TNRC6B-203ENST00000402203 B4GAT1O43505 415 aa13.07□□□□□ -0.32
TNRC6B-203ENST00000402203 HRH2P25021 359 aa13.07□□□□□ -0.32
TNRC6B-203ENST00000402203 PCSK6P29122 969 aa13.07□□□□□ -0.32
TNRC6B-203ENST00000402203 MNX1P50219 401 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms