RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 DLG1Q12959 904 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 TCEAL6Q6IPX3 200 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 SH3RF1Q7Z6J0 888 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 ZZZ3Q8IYH5 903 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 FAM47BQ8NA70 645 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 ZBTB8BQ8NAP8 495 aaPredicted RBP13.59□□□□□ -0.23
VAPA-202ENST00000400000 B3GNT4Q9C0J1 378 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 FAM83DQ9H4H8 585 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 C11orf49Q9H6J7 331 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 CARS2Q9HA77 564 aaKnown RBP13.59□□□□□ -0.23
VAPA-202ENST00000400000 LRRC4CQ9HCJ2 640 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 PPP1R11O60927 126 aaPredicted RBP13.59□□□□□ -0.23
VAPA-202ENST00000400000 MMP14P50281 582 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 GATMP50440 423 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 CACNG1Q06432 222 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 RBCK1Q9BYM8 510 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 POLMQ9NP87 494 aaPredicted RBP13.59□□□□□ -0.23
VAPA-202ENST00000400000 AP4B1Q9Y6B7 739 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 PLIN3O60664 434 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 CD247P20963 164 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 C1QTNF8P60827 252 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 CDKL1Q00532 357 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 FPGSQ05932 587 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 GPR68Q15743 365 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 ANKRD22Q5VYY1 191 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 FOXRED2Q8IWF2 684 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 COX18Q8N8Q8 333 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 EIF1ADQ8N9N8 165 aaKnown RBP13.59□□□□□ -0.23
VAPA-202ENST00000400000 OR10A6Q8NH74 314 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 TULP3O75386 442 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 NADKO95544 446 aaPredicted RBP13.59□□□□□ -0.23
VAPA-202ENST00000400000 GBAP04062 536 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 GNSP15586 552 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 CLCN7P51798 805 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 CAPZA1P52907 286 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 SPRYD7Q5W111 196 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 SMYD5Q6GMV2 418 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 TIMM8BQ9Y5J9 83 aaPredicted RBP13.59□□□□□ -0.23
VAPA-202ENST00000400000 IRAK3Q9Y616 596 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 A0A0J9YVX5 310 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 PRMT5O14744 637 aaPredicted RBP13.59□□□□□ -0.23
VAPA-202ENST00000400000 CLPXO76031 633 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 C2P06681 752 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 LINGO3P0C6S8 592 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 NCBP2P52298 156 aaKnown RBP eCLIP13.59□□□□□ -0.232e-14■■■□□ 16.6
VAPA-202ENST00000400000 ZNF135P52742 658 aaPredicted RBP13.59□□□□□ -0.23
VAPA-202ENST00000400000 IRF9Q00978 393 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 TEX44Q53QW1 395 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 GALNT18Q6P9A2 607 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 ZNF627Q7L945 461 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 FUCA2Q9BTY2 467 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 DMTF1Q9Y222 760 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 FABP3P05413 133 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 SLC35G6P0C7Q6 338 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 HSF2Q03933 536 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 AMER2Q8N7J2 671 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 SETBP1Q9Y6X0 1596 aa13.59□□□□□ -0.23
VAPA-202ENST00000400000 INSIG1O15503 277 aa13.58□□□□□ -0.23
VAPA-202ENST00000400000 TGFB1I1O43294 461 aa13.58□□□□□ -0.23
VAPA-202ENST00000400000 SNX3O60493 162 aa13.58□□□□□ -0.23
VAPA-202ENST00000400000 CAPGP40121 348 aa13.58□□□□□ -0.23
VAPA-202ENST00000400000 CASP7P55210 303 aa13.58□□□□□ -0.23
VAPA-202ENST00000400000 METTL21CQ5VZV1 264 aa13.58□□□□□ -0.23
VAPA-202ENST00000400000 ABHD15Q6UXT9 468 aa13.58□□□□□ -0.23
VAPA-202ENST00000400000 ANKRD23Q86SG2 305 aa13.58□□□□□ -0.23
VAPA-202ENST00000400000 J3QRK9 145 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 KLRC4O43908 158 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 TM7SF2O76062 418 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 SCGB1D2O95969 90 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 ALPPL2P10696 532 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 IL7RP16871 459 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 CPN2P22792 545 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 CCKBRP32239 447 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 GNA12Q03113 381 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 DCST1Q5T197 706 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 DQX1Q8TE96 717 aaKnown RBP13.58□□□□□ -0.24
VAPA-202ENST00000400000 RIMKLBQ9ULI2 386 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 NR2E1Q9Y466 385 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 PTCH2Q9Y6C5 1203 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 SNUPNO95149 360 aaKnown RBP13.58□□□□□ -0.24
VAPA-202ENST00000400000 ITGB1P05556 798 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 SERPINA6P08185 405 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 MTPNP58546 118 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 TEFMQ96QE5 360 aaKnown RBP13.58□□□□□ -0.24
VAPA-202ENST00000400000 CHCHD6Q9BRQ6 235 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 ADAP2Q9NPF8 381 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 CENPMQ9NSP4 180 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 RIIAD1A6NNX1 92 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 RPP14O95059 124 aaKnown RBP13.58□□□□□ -0.24
VAPA-202ENST00000400000 C8orf89P0DMQ9 161 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 UROSP10746 265 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 TCF4P15884 667 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 ADRA1BP35368 520 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 FAM110CQ1W6H9 321 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 ATP13A5Q4VNC0 1218 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 ARHGAP22Q7Z5H3 698 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 BEND7Q8N7W2 519 aaPredicted RBP13.58□□□□□ -0.24
VAPA-202ENST00000400000 FAM46DQ8NEK8 389 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 SEC61A2Q9H9S3 476 aa13.58□□□□□ -0.24
VAPA-202ENST00000400000 TMEM98Q9Y2Y6 226 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms