RNA–Protein interactions for RNA: ENST00000399543.1

AC025171.2-203, humanhuman

TSL 1 (best)

Gene AC025171.2, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025171.2-203ENST00000399543 GTF2H2CQ6P1K8 395 aa12.84□□□□□ -0.35
AC025171.2-203ENST00000399543 LINGO4Q6UY18 593 aa12.84□□□□□ -0.35
AC025171.2-203ENST00000399543 FRA10AC1Q70Z53 315 aa12.84□□□□□ -0.35
AC025171.2-203ENST00000399543 ABTB1Q969K4 478 aaPredicted RBP12.84□□□□□ -0.35
AC025171.2-203ENST00000399543 NSUN3Q9H649 340 aaKnown RBP12.84□□□□□ -0.35
AC025171.2-203ENST00000399543 RETREG1Q9H6L5 497 aa12.84□□□□□ -0.35
AC025171.2-203ENST00000399543 COMMD8Q9NX08 183 aa12.84□□□□□ -0.35
AC025171.2-203ENST00000399543 SMPD4Q9NXE4 827 aa12.84□□□□□ -0.35
AC025171.2-203ENST00000399543 EVLQ9UI08 416 aaPredicted RBP12.84□□□□□ -0.35
AC025171.2-203ENST00000399543 DHRS7Q9Y394 339 aa12.84□□□□□ -0.35
AC025171.2-203ENST00000399543 COMMD10Q9Y6G5 202 aa12.84□□□□□ -0.35
AC025171.2-203ENST00000399543 DFNA5O60443 496 aa12.83□□□□□ -0.35
AC025171.2-203ENST00000399543 NFKBIAP25963 317 aa12.83□□□□□ -0.35
AC025171.2-203ENST00000399543 ANKDD1AQ495B1 522 aa12.83□□□□□ -0.35
AC025171.2-203ENST00000399543 FAM98BQ52LJ0 330 aaKnown RBP12.83□□□□□ -0.35
AC025171.2-203ENST00000399543 ZNF773Q6PK81 442 aa12.83□□□□□ -0.35
AC025171.2-203ENST00000399543 ADAMTSL2Q86TH1 951 aa12.83□□□□□ -0.35
AC025171.2-203ENST00000399543 STK32CQ86UX6 486 aa12.83□□□□□ -0.35
AC025171.2-203ENST00000399543 OR8J3Q8NGG0 315 aa12.83□□□□□ -0.35
AC025171.2-203ENST00000399543 OR13F1Q8NGS4 319 aa12.83□□□□□ -0.35
AC025171.2-203ENST00000399543 THAP11Q96EK4 314 aa12.83□□□□□ -0.35
AC025171.2-203ENST00000399543 CCDC115Q96NT0 180 aa12.83□□□□□ -0.35
AC025171.2-203ENST00000399543 TUBA1CQ9BQE3 449 aa12.83□□□□□ -0.35
AC025171.2-203ENST00000399543 TTLL2Q9BWV7 592 aa12.83□□□□□ -0.35
AC025171.2-203ENST00000399543 NACA2Q9H009 215 aa12.83□□□□□ -0.35
AC025171.2-203ENST00000399543 IPPKQ9H8X2 491 aa12.83□□□□□ -0.35
AC025171.2-203ENST00000399543 IL17CQ9P0M4 197 aa12.83□□□□□ -0.35
AC025171.2-203ENST00000399543 TNPO3Q9Y5L0 923 aaKnown RBP12.83□□□□□ -0.35
AC025171.2-203ENST00000399543 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.83□□□□□ -0.36
AC025171.2-203ENST00000399543 PRMT5O14744 637 aaPredicted RBP12.83□□□□□ -0.36
AC025171.2-203ENST00000399543 FFAR2O15552 330 aa12.83□□□□□ -0.36
AC025171.2-203ENST00000399543 TSPAN3O60637 253 aa12.83□□□□□ -0.36
AC025171.2-203ENST00000399543 THRBP10828 461 aa12.83□□□□□ -0.36
AC025171.2-203ENST00000399543 CST5P28325 142 aaPredicted RBP12.83□□□□□ -0.36
AC025171.2-203ENST00000399543 MTHFRP42898 656 aa12.83□□□□□ -0.36
AC025171.2-203ENST00000399543 GRSF1Q12849 480 aaKnown RBP eCLIP12.83□□□□□ -0.36
AC025171.2-203ENST00000399543 ZNF177Q13360 481 aaPredicted RBP12.83□□□□□ -0.36
AC025171.2-203ENST00000399543 NKG7Q16617 165 aa12.83□□□□□ -0.36
AC025171.2-203ENST00000399543 CXorf57Q6NSI4 855 aaKnown RBP12.83□□□□□ -0.36
AC025171.2-203ENST00000399543 CLEC4FQ8N1N0 589 aa12.83□□□□□ -0.36
AC025171.2-203ENST00000399543 TERB1Q8NA31 727 aa12.83□□□□□ -0.36
AC025171.2-203ENST00000399543 TBC1D15Q8TC07 691 aa12.83□□□□□ -0.36
AC025171.2-203ENST00000399543 TANKQ92844 425 aa12.83□□□□□ -0.36
AC025171.2-203ENST00000399543 IKZF5Q9H5V7 419 aa12.83□□□□□ -0.36
AC025171.2-203ENST00000399543 DNAAF2Q9NVR5 837 aaKnown RBP12.83□□□□□ -0.36
AC025171.2-203ENST00000399543 ZMYM5Q9UJ78 669 aa12.83□□□□□ -0.36
AC025171.2-203ENST00000399543 A0A1B0GVM2 712 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 IFRD1O00458 451 aaPredicted RBP12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 OTCP00480 354 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 MBL2P11226 248 aaPredicted RBP12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 MATN1P21941 496 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 EEF1B2P24534 225 aaKnown RBP12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 HMOX2P30519 316 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 GATMP50440 423 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 IST1P53990 364 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 CHRNB3Q05901 458 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 TWF1Q12792 350 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 XAF1Q6GPH4 301 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 ENPP6Q6UWR7 440 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 STK40Q8N2I9 435 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 OR2T12Q8NG77 320 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 SLC13A3Q8WWT9 602 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 CNDP2Q96KP4 475 aaKnown RBP12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 GORASP2Q9H8Y8 452 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 GKN1Q9NS71 199 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 ELOVL2Q9NXB9 296 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 TMEM9Q9P0T7 183 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 COCHO43405 550 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 STC2O76061 302 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 KCNH1O95259 989 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 INHBBP09529 407 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 CORO1AP31146 461 aaKnown RBP12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 HSPA7P48741 367 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 RPL38P63173 70 aaKnown RBP12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 CACNG1Q06432 222 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 RNF219Q5W0B1 726 aaPredicted RBP12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 FUT10Q6P4F1 479 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 NCEH1Q6PIU2 408 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 XKR5Q6UX68 686 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 Q6ZNX1 250 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 C16orf59Q7L2K0 433 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 TMEM173Q86WV6 379 aaPredicted RBP12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 ZNF548Q8NEK5 533 aaPredicted RBP12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 FIG4Q92562 907 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 GTF2H4Q92759 462 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 CDK5RAP1Q96SZ6 601 aaKnown RBP12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 C17orf80Q9BSJ5 609 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 CIPCQ9C0C6 399 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 ING2Q9H160 280 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 TOR3AQ9H497 397 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 FANCEQ9HB96 536 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 LTB4R2Q9NPC1 389 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 TMEM161AQ9NX61 479 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 PCDHB9Q9Y5E1 797 aa12.82□□□□□ -0.36
AC025171.2-203ENST00000399543 ZNF840PA6NDX5 716 aa12.81□□□□□ -0.36
AC025171.2-203ENST00000399543 NT5C1B-RDH14C9J2C7 533 aa12.81□□□□□ -0.36
AC025171.2-203ENST00000399543 TAPBPO15533 448 aa12.81□□□□□ -0.36
AC025171.2-203ENST00000399543 SEC14L2O76054 403 aa12.81□□□□□ -0.36
AC025171.2-203ENST00000399543 GUCA1CO95843 209 aa12.81□□□□□ -0.36
AC025171.2-203ENST00000399543 SLC2A4P14672 509 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms