RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 DAG1Q14118 895 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 FRA10AC1Q70Z53 315 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 TAS2R42Q7RTR8 314 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 OR4F6Q8NGB9 312 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 TUBA1CQ9BQE3 449 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 P2RY12Q9H244 342 aa25.19■■□□□ 1.62
COL13A1-203ENST00000398969 H7C0S8 307 aa25.18■■□□□ 1.62
COL13A1-203ENST00000398969 CLDN11O75508 207 aa25.18■■□□□ 1.62
COL13A1-203ENST00000398969 SGSHP51688 502 aa25.18■■□□□ 1.62
COL13A1-203ENST00000398969 TRAF2Q12933 501 aa25.18■■□□□ 1.62
COL13A1-203ENST00000398969 ITIH5Q86UX2 942 aa25.18■■□□□ 1.62
COL13A1-203ENST00000398969 THAP11Q96EK4 314 aa25.18■■□□□ 1.62
COL13A1-203ENST00000398969 ELAC1Q9H777 363 aaKnown RBP25.18■■□□□ 1.62
COL13A1-203ENST00000398969 SAGE1Q9NXZ1 904 aa25.18■■□□□ 1.62
COL13A1-203ENST00000398969 ILVBLA1L0T0 632 aa25.17■■□□□ 1.62
COL13A1-203ENST00000398969 SLC38A8A6NNN8 435 aa25.17■■□□□ 1.62
COL13A1-203ENST00000398969 IFRD1O00458 451 aaPredicted RBP25.17■■□□□ 1.62
COL13A1-203ENST00000398969 FOXD2O60548 495 aaPredicted RBP25.17■■□□□ 1.62
COL13A1-203ENST00000398969 ALPLP05186 524 aa25.17■■□□□ 1.62
COL13A1-203ENST00000398969 CNPP09543 421 aaKnown RBP25.17■■□□□ 1.62
COL13A1-203ENST00000398969 TCF3P15923 654 aa25.17■■□□□ 1.62
COL13A1-203ENST00000398969 HMOX2P30519 316 aa25.17■■□□□ 1.62
COL13A1-203ENST00000398969 ATP5C1P36542 298 aaKnown RBP25.17■■□□□ 1.62
COL13A1-203ENST00000398969 AP5B1Q2VPB7 878 aa25.17■■□□□ 1.62
COL13A1-203ENST00000398969 FAM98BQ52LJ0 330 aaKnown RBP25.17■■□□□ 1.62
COL13A1-203ENST00000398969 FGD3Q5JSP0 725 aa25.17■■□□□ 1.62
COL13A1-203ENST00000398969 ZNF773Q6PK81 442 aa25.17■■□□□ 1.62
COL13A1-203ENST00000398969 DENND1CQ8IV53 801 aa25.17■■□□□ 1.62
COL13A1-203ENST00000398969 DNAAF2Q9NVR5 837 aaKnown RBP25.17■■□□□ 1.62
COL13A1-203ENST00000398969 TSR3Q9UJK0 312 aaKnown RBP25.17■■□□□ 1.62
COL13A1-203ENST00000398969 TNPO3Q9Y5L0 923 aaKnown RBP25.17■■□□□ 1.62
COL13A1-203ENST00000398969 MYCP01106 439 aaPredicted RBP25.17■■□□□ 1.62
COL13A1-203ENST00000398969 PCNAP12004 261 aa25.17■■□□□ 1.62
COL13A1-203ENST00000398969 JAK1P23458 1154 aa25.17■■□□□ 1.62
COL13A1-203ENST00000398969 SHMT2P34897 504 aa25.17■■□□□ 1.62
COL13A1-203ENST00000398969 GTF2H2Q13888 395 aa25.17■■□□□ 1.62
COL13A1-203ENST00000398969 ABRAXAS2Q15018 415 aa25.17■■□□□ 1.62
COL13A1-203ENST00000398969 PLA2G4EQ3MJ16 856 aa25.17■■□□□ 1.62
COL13A1-203ENST00000398969 RFTN2Q52LD8 501 aaPredicted RBP25.17■■□□□ 1.62
COL13A1-203ENST00000398969 GTF2H2CQ6P1K8 395 aa25.17■■□□□ 1.62
COL13A1-203ENST00000398969 SBSNQ6UWP8 590 aa25.17■■□□□ 1.62
COL13A1-203ENST00000398969 OR8J3Q8NGG0 315 aa25.17■■□□□ 1.62
COL13A1-203ENST00000398969 PDLIM5Q96HC4 596 aaKnown RBP25.17■■□□□ 1.62
COL13A1-203ENST00000398969 CNDP2Q96KP4 475 aaKnown RBP25.17■■□□□ 1.62
COL13A1-203ENST00000398969 DHRS7Q9Y394 339 aa25.17■■□□□ 1.62
COL13A1-203ENST00000398969 PCDHB7Q9Y5E2 793 aa25.17■■□□□ 1.62
COL13A1-203ENST00000398969 MAGED1Q9Y5V3 778 aaPredicted RBP25.17■■□□□ 1.62
COL13A1-203ENST00000398969 B4GAT1O43505 415 aa25.16■■□□□ 1.62
COL13A1-203ENST00000398969 KATNA1O75449 491 aa25.16■■□□□ 1.62
COL13A1-203ENST00000398969 ATF6P18850 670 aa25.16■■□□□ 1.62
COL13A1-203ENST00000398969 GRSF1Q12849 480 aaKnown RBP eCLIP25.16■■□□□ 1.62
COL13A1-203ENST00000398969 KIAA0040Q15053 153 aa25.16■■□□□ 1.62
COL13A1-203ENST00000398969 FAM117BQ6P1L5 589 aa25.16■■□□□ 1.62
COL13A1-203ENST00000398969 DUS1LQ6P1R4 473 aaKnown RBP25.16■■□□□ 1.62
COL13A1-203ENST00000398969 MIPOL1Q8TD10 442 aa25.16■■□□□ 1.62
COL13A1-203ENST00000398969 ZNF583Q96ND8 569 aa25.16■■□□□ 1.62
COL13A1-203ENST00000398969 GJB5O95377 273 aa25.16■■□□□ 1.62
COL13A1-203ENST00000398969 THRBP10828 461 aa25.16■■□□□ 1.62
COL13A1-203ENST00000398969 CD247P20963 164 aa25.16■■□□□ 1.62
COL13A1-203ENST00000398969 NFKBIAP25963 317 aa25.16■■□□□ 1.62
COL13A1-203ENST00000398969 PLIN5Q00G26 463 aa25.16■■□□□ 1.62
COL13A1-203ENST00000398969 CHRNB3Q05901 458 aa25.16■■□□□ 1.62
COL13A1-203ENST00000398969 ADAMTSL2Q86TH1 951 aa25.16■■□□□ 1.62
COL13A1-203ENST00000398969 ABI1Q8IZP0 508 aa25.16■■□□□ 1.62
COL13A1-203ENST00000398969 OR13F1Q8NGS4 319 aa25.16■■□□□ 1.62
COL13A1-203ENST00000398969 TBC1D15Q8TC07 691 aa25.16■■□□□ 1.62
COL13A1-203ENST00000398969 CCDC115Q96NT0 180 aa25.16■■□□□ 1.62
COL13A1-203ENST00000398969 NACA2Q9H009 215 aa25.16■■□□□ 1.62
COL13A1-203ENST00000398969 SMPD4Q9NXE4 827 aa25.16■■□□□ 1.62
COL13A1-203ENST00000398969 TMEM9Q9P0T7 183 aa25.16■■□□□ 1.62
COL13A1-203ENST00000398969 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP25.15■■□□□ 1.62
COL13A1-203ENST00000398969 PITPNM1O00562 1244 aa25.15■■□□□ 1.62
COL13A1-203ENST00000398969 TRAF3Q13114 568 aa25.15■■□□□ 1.62
COL13A1-203ENST00000398969 ZNF177Q13360 481 aaPredicted RBP25.15■■□□□ 1.62
COL13A1-203ENST00000398969 CBX2Q14781 532 aaPredicted RBP25.15■■□□□ 1.62
COL13A1-203ENST00000398969 STK32CQ86UX6 486 aa25.15■■□□□ 1.62
COL13A1-203ENST00000398969 CLEC4FQ8N1N0 589 aa25.15■■□□□ 1.62
COL13A1-203ENST00000398969 STK40Q8N2I9 435 aa25.15■■□□□ 1.62
COL13A1-203ENST00000398969 CARS2Q9HA77 564 aaKnown RBP25.15■■□□□ 1.62
COL13A1-203ENST00000398969 PAK6Q9NQU5 681 aaPredicted RBP25.15■■□□□ 1.62
COL13A1-203ENST00000398969 VAPAQ9P0L0 249 aa25.15■■□□□ 1.62
COL13A1-203ENST00000398969 EEF1B2P24534 225 aaKnown RBP25.15■■□□□ 1.62
COL13A1-203ENST00000398969 MTHFRP42898 656 aa25.15■■□□□ 1.62
COL13A1-203ENST00000398969 Q6ZNX1 250 aa25.15■■□□□ 1.62
COL13A1-203ENST00000398969 AADATQ8N5Z0 425 aa25.15■■□□□ 1.62
COL13A1-203ENST00000398969 FAM86B1Q8N7N1 296 aa25.15■■□□□ 1.62
COL13A1-203ENST00000398969 DEFB118Q96PH6 123 aa25.15■■□□□ 1.62
COL13A1-203ENST00000398969 CDK5RAP1Q96SZ6 601 aaKnown RBP25.15■■□□□ 1.62
COL13A1-203ENST00000398969 C17orf80Q9BSJ5 609 aa25.15■■□□□ 1.62
COL13A1-203ENST00000398969 IPPKQ9H8X2 491 aa25.15■■□□□ 1.62
COL13A1-203ENST00000398969 MARCH5Q9NX47 278 aa25.15■■□□□ 1.62
COL13A1-203ENST00000398969 CCL27Q9Y4X3 112 aa25.15■■□□□ 1.62
COL13A1-203ENST00000398969 TET1Q8NFU7 2136 aa25.14■■□□□ 1.62
COL13A1-203ENST00000398969 DFNA5O60443 496 aa25.14■■□□□ 1.62
COL13A1-203ENST00000398969 KCNH1O95259 989 aa25.14■■□□□ 1.62
COL13A1-203ENST00000398969 OTCP00480 354 aa25.14■■□□□ 1.62
COL13A1-203ENST00000398969 KLKB1P03952 638 aa25.14■■□□□ 1.62
COL13A1-203ENST00000398969 MBL2P11226 248 aaPredicted RBP25.14■■□□□ 1.62
COL13A1-203ENST00000398969 JUNBP17275 347 aaPredicted RBP25.14■■□□□ 1.62
COL13A1-203ENST00000398969 ARF5P84085 180 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms