RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 PCBP2Q15366 365 aaKnown RBP eCLIP11.4□□□□□ -0.595e-7■■■■□ 25.7
PCDHGA8-201ENST00000398604 PAQR3Q6TCH7 311 aa11.4□□□□□ -0.59
PCDHGA8-201ENST00000398604 ARMCX6Q7L4S7 300 aa11.4□□□□□ -0.59
PCDHGA8-201ENST00000398604 SFRP1Q8N474 314 aa11.4□□□□□ -0.59
PCDHGA8-201ENST00000398604 JSRP1Q96MG2 331 aaPredicted RBP11.4□□□□□ -0.59
PCDHGA8-201ENST00000398604 CDK15Q96Q40 435 aa11.4□□□□□ -0.59
PCDHGA8-201ENST00000398604 ADAP2Q9NPF8 381 aa11.4□□□□□ -0.59
PCDHGA8-201ENST00000398604 FZD10Q9ULW2 581 aa11.4□□□□□ -0.59
PCDHGA8-201ENST00000398604 RBM7Q9Y580 266 aaKnown RBP11.4□□□□□ -0.59
PCDHGA8-201ENST00000398604 INSL6Q9Y581 213 aa11.4□□□□□ -0.59
PCDHGA8-201ENST00000398604 SPTBN2O15020 2390 aa11.4□□□□□ -0.59
PCDHGA8-201ENST00000398604 PSMD11O00231 422 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 GNB5O14775 395 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 TNFRSF21O75509 655 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 ITGA2P17301 1181 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 CTSOP43234 321 aaPredicted RBP11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 RXRGP48443 463 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 POLR2JP52435 117 aaKnown RBP11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 HYAL2Q12891 473 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 BNIP1Q12981 228 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 PDK3Q15120 406 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 GPR107Q5VW38 600 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 ZNF598Q86UK7 904 aaKnown RBP11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 MPP5Q8N3R9 675 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 LPGAT1Q92604 370 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 FUBP3Q96I24 572 aaKnown RBP eCLIP11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 CARS2Q9HA77 564 aaKnown RBP11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 KLHL18O94889 574 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 CCL5P13501 91 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 PGDP52209 483 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 ENPP7Q6UWV6 458 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 SLC34A3Q8N130 599 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 DEFB119Q8N690 84 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 FAM98AQ8NCA5 519 aaKnown RBP11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 MRPS26Q9BYN8 205 aaKnown RBP11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 IKZF2Q9UKS7 526 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 ZNF536O15090 1300 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 CLUHO75153 1309 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 CPED1A4D0V7 1026 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 ETS2P15036 469 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 NUP62P37198 522 aaPredicted RBP11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 MAPKAPK2P49137 400 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 HMGCS1Q01581 520 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 GRSF1Q12849 480 aaKnown RBP eCLIP11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 IRF5Q13568 498 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 ANXA8L1Q5VT79 327 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 TMEM198Q66K66 360 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 MBLAC2Q68D91 279 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 RTL4Q6ZR62 310 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 FAM46DQ8NEK8 389 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 METTL21AQ8WXB1 218 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 SIPA1Q96FS4 1042 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 RIPOR3Q96MK2 946 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 ABCB10Q9NRK6 738 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 EVA1BQ9NVM1 165 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 POLR3BQ9NW08 1133 aaPredicted RBP11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 GPN3Q9UHW5 284 aaPredicted RBP11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 MAPRE3Q9UPY8 281 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 ZNF318Q5VUA4 2279 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 TCRBV7S3A2A0A539 114 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 SNPHO15079 494 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 RGS8P57771 180 aaPredicted RBP11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 DGUOKQ16854 277 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 PAOXQ6QHF9 649 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 GPR65Q8IYL9 337 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 UNC93B1Q9H1C4 597 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 ZDHHC4Q9NPG8 344 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 GALNT8Q9NY28 637 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 AP3M1Q9Y2T2 418 aa11.39□□□□□ -0.59
PCDHGA8-201ENST00000398604 A0A1B0GW55 424 aa11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 H0YGN5 161 aa11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 FPGTO14772 594 aa11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 ALOX5P09917 674 aa11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 DUX4L2P0CJ85 424 aa11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 DUX4L3P0CJ86 424 aa11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 DUX4L4P0CJ87 422 aa11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 DUX4L5P0CJ88 424 aa11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 DUX4L6P0CJ89 424 aa11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 DUX4L7P0CJ90 424 aa11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 NCK1P16333 377 aa11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 SLC11A1P49279 550 aa11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 ECT2LQ008S8 904 aa11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 LCP2Q13094 533 aa11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 PTCHD4Q6ZW05 846 aa11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 PIGWQ7Z7B1 504 aa11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 ADGRG6Q86SQ4 1221 aa11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 FAM13CQ8NE31 585 aa11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 OR10A6Q8NH74 314 aa11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 SMPDL3BQ92485 455 aa11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 SUCOQ9UBS9 1254 aaKnown RBP11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 DUX4Q9UBX2 424 aa11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 NFS1Q9Y697 457 aa11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 AP4B1Q9Y6B7 739 aa11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 HLA-EP13747 358 aa11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 FUT4P22083 530 aa11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 JAK1P23458 1154 aa11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 CDH5P33151 784 aaPredicted RBP11.38□□□□□ -0.59
PCDHGA8-201ENST00000398604 SLC1A2P43004 574 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms