RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 ATP6V1HQ9UI12 483 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 MAGED1Q9Y5V3 778 aaPredicted RBP4.86□□□□□ -1.63
SMAD4-202ENST00000398417 CLDN11O75508 207 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 ABCB1P08183 1280 aaPredicted RBP4.86□□□□□ -1.63
SMAD4-202ENST00000398417 ANXA5P08758 320 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 MYCLP1P12525 358 aaPredicted RBP4.86□□□□□ -1.63
SMAD4-202ENST00000398417 CYP4B1P13584 511 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 SHMT2P34897 504 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 CASP9P55211 416 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 TXNL4AP83876 142 aaKnown RBP4.86□□□□□ -1.63
SMAD4-202ENST00000398417 DSC3Q14574 896 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 PERM1Q5SV97 790 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 UBE2R2Q712K3 238 aaPredicted RBP4.86□□□□□ -1.63
SMAD4-202ENST00000398417 LYSMD3Q7Z3D4 306 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 BNIPLQ7Z465 357 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 THAP5Q7Z6K1 395 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 ZFP28Q8NHY6 868 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 ELOVL6Q9H5J4 265 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 ZNF385DQ9H6B1 395 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 CCM2LQ9NUG4 571 aaPredicted RBP4.86□□□□□ -1.63
SMAD4-202ENST00000398417 MAGEL2Q9UJ55 1249 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 NACAE9PAV3 2078 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 CXCR6O00574 342 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 ZNF623O75123 536 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 UROSP10746 265 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 COX7A2P14406 83 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 ENTPD1P49961 510 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 ST13P50502 369 aaKnown RBP4.86□□□□□ -1.63
SMAD4-202ENST00000398417 SGSHP51688 502 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 ITGADQ13349 1161 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 PATL1Q86TB9 770 aaKnown RBP4.86□□□□□ -1.63
SMAD4-202ENST00000398417 ANKFN1Q8N957 763 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 SELENOMQ8WWX9 145 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 TRIM54Q9BYV2 358 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 CFAP97Q9P2B7 532 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 CPQQ9Y646 472 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 CDK5RAP2Q96SN8 1893 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 GLYATL1P3A0A0U1RQE8 302 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 FAM234BA2RU67 622 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 UPK3BL1B0FP48 263 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 UPK3BL2E5RIL1 263 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 J3QRK9 145 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 LDB2O43679 373 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 MTX2O75431 263 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 MYO1DO94832 1006 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 RAB32Q13637 225 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 DAG1Q14118 895 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 POM121L1PQ3SYA9 428 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 PDCD4Q53EL6 469 aaKnown RBP4.86□□□□□ -1.63
SMAD4-202ENST00000398417 CCNYL2Q5T2Q4 361 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 EGFLAMQ63HQ2 1017 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 OR4F3Q6IEY1 312 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 C17orf99Q6UX52 265 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 HACD2Q6Y1H2 254 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 LRRC8DQ7L1W4 858 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 CNTN4Q8IWV2 1026 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 KIAA1143Q96AT1 154 aaPredicted RBP4.86□□□□□ -1.63
SMAD4-202ENST00000398417 FBXL8Q96CD0 374 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 C1orf74Q96LT6 269 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 BOCQ9BWV1 1114 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 DERL2Q9GZP9 239 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 SYNDIG1Q9H7V2 258 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 GALNT8Q9NY28 637 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 SMPD3Q9NY59 655 aaPredicted RBP4.86□□□□□ -1.63
SMAD4-202ENST00000398417 PNMA8BQ9ULN7 279 aaPredicted RBP4.86□□□□□ -1.63
SMAD4-202ENST00000398417 DFNA5O60443 496 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 WDR47O94967 919 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 OTCP00480 354 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 POLR2EP19388 210 aaKnown RBP4.86□□□□□ -1.63
SMAD4-202ENST00000398417 ALDH7A1P49419 539 aaKnown RBP4.86□□□□□ -1.63
SMAD4-202ENST00000398417 ARHGDIAP52565 204 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 ACLYP53396 1101 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 RAD23AP54725 363 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 PRKG2Q13237 762 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 GPR17Q13304 367 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 SAPCD2Q86UD0 394 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 HS3ST5Q8IZT8 346 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 CCDC74AQ96AQ1 378 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 UHRF1Q96T88 793 aaPredicted RBP4.86□□□□□ -1.63
SMAD4-202ENST00000398417 UGT2B28Q9BY64 529 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 ARL15Q9NXU5 204 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 AASSQ9UDR5 926 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 VPS9D1Q9Y2B5 631 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 DGKBQ9Y6T7 804 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 COL6A3P12111 3177 aa4.86□□□□□ -1.63
SMAD4-202ENST00000398417 A0A1B0GTL3 188 aa4.85□□□□□ -1.63
SMAD4-202ENST00000398417 MAGEB3O15480 346 aa4.85□□□□□ -1.63
SMAD4-202ENST00000398417 MITFO75030 526 aaPredicted RBP4.85□□□□□ -1.63
SMAD4-202ENST00000398417 SERPINA1P01009 418 aa4.85□□□□□ -1.63
SMAD4-202ENST00000398417 KRT6AP02538 564 aa4.85□□□□□ -1.63
SMAD4-202ENST00000398417 KRT6BP04259 564 aa4.85□□□□□ -1.63
SMAD4-202ENST00000398417 C8BP07358 591 aa4.85□□□□□ -1.63
SMAD4-202ENST00000398417 SOAT1P35610 550 aa4.85□□□□□ -1.63
SMAD4-202ENST00000398417 KRT6CP48668 564 aa4.85□□□□□ -1.63
SMAD4-202ENST00000398417 INHBCP55103 352 aa4.85□□□□□ -1.63
SMAD4-202ENST00000398417 SREBF2Q12772 1141 aa4.85□□□□□ -1.63
SMAD4-202ENST00000398417 RFTN1Q14699 578 aaPredicted RBP4.85□□□□□ -1.63
SMAD4-202ENST00000398417 GALNT18Q6P9A2 607 aa4.85□□□□□ -1.63
SMAD4-202ENST00000398417 CGREF1Q99674 301 aa4.85□□□□□ -1.63
SMAD4-202ENST00000398417 MYOCQ99972 504 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms