RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 CD9P21926 228 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 SKIV2L2P42285 1042 aaKnown RBP23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 PGGT1BP53609 377 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 HSPA14Q0VDF9 509 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 ZNF658BQ4V348 819 aaPredicted RBP23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 SLC30A9Q6PML9 568 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 CEP97Q8IW35 865 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 LILRA3Q8N6C8 439 aaPredicted RBP23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 CD200R1Q8TD46 325 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 SEMA4GQ9NTN9 838 aa23.16■■□□□ 1.3
TSPAN4-203ENST00000397397 GPR179Q6PRD1 2367 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 LRP3O75074 770 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 STMN1P16949 149 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 IDSP22304 550 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 DGKAP23743 735 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 EPHA8P29322 1005 aaPredicted RBP23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 PREPP48147 710 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 SERPINB8P50452 374 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 CCT8P50990 548 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 CLCNKAP51800 687 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 ZNF460Q14592 562 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 RASA2Q15283 850 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 TTLL9Q3SXZ7 439 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 KRT71Q3SY84 523 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 PLEKHS1Q5SXH7 462 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 CEP85LQ5SZL2 805 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 GKN2Q86XP6 184 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 SPNS2Q8IVW8 549 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 RIBC1Q8N443 379 aaPredicted RBP23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 MINDY1Q8N5J2 469 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 GIMAP7Q8NHV1 300 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 ASZ1Q8WWH4 475 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 ANKRD7Q92527 254 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 TMEM159Q96B96 161 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 ZBTB9Q96C00 473 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 MTBPQ96DY7 904 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 UCKL1Q9NWZ5 548 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 KLHL42Q9P2K6 505 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 DOLKQ9UPQ8 538 aa23.15■■□□□ 1.3
TSPAN4-203ENST00000397397 SLC5A10A0PJK1 596 aa23.14■■□□□ 1.29
TSPAN4-203ENST00000397397 LNP1A1A4G5 178 aa23.14■■□□□ 1.29
TSPAN4-203ENST00000397397 SNX2O60749 519 aa23.14■■□□□ 1.29
TSPAN4-203ENST00000397397 RAB10P61026 200 aa23.14■■□□□ 1.29
TSPAN4-203ENST00000397397 CSRP2Q16527 193 aa23.14■■□□□ 1.29
TSPAN4-203ENST00000397397 METRNLQ641Q3 311 aa23.14■■□□□ 1.29
TSPAN4-203ENST00000397397 XKR5Q6UX68 686 aa23.14■■□□□ 1.29
TSPAN4-203ENST00000397397 CMC1Q7Z7K0 106 aa23.14■■□□□ 1.29
TSPAN4-203ENST00000397397 RUFY1Q96T51 708 aa23.14■■□□□ 1.29
TSPAN4-203ENST00000397397 EURLQ9NYK6 297 aa23.14■■□□□ 1.29
TSPAN4-203ENST00000397397 TAAR2Q9P1P5 351 aa23.14■■□□□ 1.29
TSPAN4-203ENST00000397397 ACSL5Q9ULC5 683 aa23.14■■□□□ 1.29
TSPAN4-203ENST00000397397 OTOGLQ3ZCN5 2332 aa23.13■■□□□ 1.29
TSPAN4-203ENST00000397397 PRR19A6NJB7 356 aa23.13■■□□□ 1.29
TSPAN4-203ENST00000397397 TPP1O14773 563 aa23.13■■□□□ 1.29
TSPAN4-203ENST00000397397 PHGDHO43175 533 aaKnown RBP23.13■■□□□ 1.29
TSPAN4-203ENST00000397397 GPC4O75487 556 aa23.13■■□□□ 1.29
TSPAN4-203ENST00000397397 PLOD1Q02809 727 aaPredicted RBP23.13■■□□□ 1.29
TSPAN4-203ENST00000397397 SEPT7Q16181 437 aaKnown RBP23.13■■□□□ 1.29
TSPAN4-203ENST00000397397 ACSBG2Q5FVE4 666 aa23.13■■□□□ 1.29
TSPAN4-203ENST00000397397 PAQR3Q6TCH7 311 aa23.13■■□□□ 1.29
TSPAN4-203ENST00000397397 RAPH1Q70E73 1250 aa23.13■■□□□ 1.29
TSPAN4-203ENST00000397397 CPNE9Q8IYJ1 553 aa23.13■■□□□ 1.29
TSPAN4-203ENST00000397397 CYP4X1Q8N118 509 aa23.13■■□□□ 1.29
TSPAN4-203ENST00000397397 CNPY4Q8N129 248 aa23.13■■□□□ 1.29
TSPAN4-203ENST00000397397 SDR16C5Q8N3Y7 309 aa23.13■■□□□ 1.29
TSPAN4-203ENST00000397397 POPDC3Q9HBV1 291 aa23.13■■□□□ 1.29
TSPAN4-203ENST00000397397 GPAMQ9HCL2 828 aa23.13■■□□□ 1.29
TSPAN4-203ENST00000397397 PARD6AQ9NPB6 346 aa23.13■■□□□ 1.29
TSPAN4-203ENST00000397397 SNX15Q9NRS6 342 aa23.13■■□□□ 1.29
TSPAN4-203ENST00000397397 PDZK1P1A8MUH7 402 aa23.12■■□□□ 1.29
TSPAN4-203ENST00000397397 ANXA6P08133 673 aa23.12■■□□□ 1.29
TSPAN4-203ENST00000397397 RPL10P27635 214 aaKnown RBP23.12■■□□□ 1.29
TSPAN4-203ENST00000397397 CRABP2P29373 138 aa23.12■■□□□ 1.29
TSPAN4-203ENST00000397397 TYK2P29597 1187 aa23.12■■□□□ 1.29
TSPAN4-203ENST00000397397 PDHA2P29803 388 aa23.12■■□□□ 1.29
TSPAN4-203ENST00000397397 RPA4Q13156 261 aa23.12■■□□□ 1.29
TSPAN4-203ENST00000397397 ZKSCAN8Q15776 578 aaPredicted RBP23.12■■□□□ 1.29
TSPAN4-203ENST00000397397 CROCCP2Q86T23 111 aa23.12■■□□□ 1.29
TSPAN4-203ENST00000397397 GATAD2AQ86YP4 633 aa23.12■■□□□ 1.29
TSPAN4-203ENST00000397397 GLMNQ92990 594 aa23.12■■□□□ 1.29
TSPAN4-203ENST00000397397 PRDM8Q9NQV8 689 aa23.12■■□□□ 1.29
TSPAN4-203ENST00000397397 TBC1D29Q9UFV1 150 aa23.12■■□□□ 1.29
TSPAN4-203ENST00000397397 LGALS13Q9UHV8 139 aa23.12■■□□□ 1.29
TSPAN4-203ENST00000397397 TSR3Q9UJK0 312 aaKnown RBP23.12■■□□□ 1.29
TSPAN4-203ENST00000397397 PSMD13Q9UNM6 376 aa23.12■■□□□ 1.29
TSPAN4-203ENST00000397397 CDYLQ9Y232 598 aa23.12■■□□□ 1.29
TSPAN4-203ENST00000397397 CSNK1G3Q9Y6M4 447 aa23.12■■□□□ 1.29
TSPAN4-203ENST00000397397 FAM186AA6NE01 2351 aa23.12■■□□□ 1.29
TSPAN4-203ENST00000397397 LMO7DNF2Z398 122 aa23.11■■□□□ 1.29
TSPAN4-203ENST00000397397 YY2O15391 372 aa23.11■■□□□ 1.29
TSPAN4-203ENST00000397397 SLCO2B1O94956 709 aa23.11■■□□□ 1.29
TSPAN4-203ENST00000397397 ALDOAP04075 364 aaKnown RBP23.11■■□□□ 1.29
TSPAN4-203ENST00000397397 KRT15P19012 456 aa23.11■■□□□ 1.29
TSPAN4-203ENST00000397397 DNAJC3Q13217 504 aa23.11■■□□□ 1.29
TSPAN4-203ENST00000397397 GBX1Q14549 363 aa23.11■■□□□ 1.29
TSPAN4-203ENST00000397397 TIFABQ6ZNK6 161 aa23.11■■□□□ 1.29
TSPAN4-203ENST00000397397 VRK3Q8IV63 474 aa23.11■■□□□ 1.29
TSPAN4-203ENST00000397397 KIAA2013Q8IYS2 634 aa23.11■■□□□ 1.29
TSPAN4-203ENST00000397397 SLC25A45Q8N413 288 aa23.11■■□□□ 1.29
TSPAN4-203ENST00000397397 FAM46DQ8NEK8 389 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms