RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 GSE1Q14687 1217 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 PLCL1Q15111 1095 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 SIX1Q15475 284 aaPredicted RBP13.64□□□□□ -0.23
SEC13-204ENST00000397099 AARS2Q5JTZ9 985 aaKnown RBP13.64□□□□□ -0.23
SEC13-204ENST00000397099 SNAP47Q5SQN1 464 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 MANEAQ5SRI9 462 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 AFTPHQ6ULP2 937 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 DET1Q7L5Y6 550 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 PRSS42Q7Z5A4 293 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 BPHLQ86WA6 291 aaPredicted RBP13.64□□□□□ -0.23
SEC13-204ENST00000397099 KMT5CQ86Y97 462 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 BMPERQ8N8U9 685 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 PPHLN1Q8NEY8 458 aaKnown RBP13.64□□□□□ -0.23
SEC13-204ENST00000397099 OR52K1Q8NGK4 314 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 UBXN4Q92575 508 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 ART4Q93070 314 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 C12orf66Q96MD2 445 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 EFHD1Q9BUP0 239 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 TSSK1BQ9BXA7 367 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 IL22Q9GZX6 179 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 ZNF768Q9H5H4 540 aaKnown RBP13.64□□□□□ -0.23
SEC13-204ENST00000397099 CASS4Q9NQ75 786 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 TMEM9Q9P0T7 183 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 WDR37Q9Y2I8 494 aa13.64□□□□□ -0.23
SEC13-204ENST00000397099 LIN7AO14910 233 aaPredicted RBP13.63□□□□□ -0.23
SEC13-204ENST00000397099 POLR1CO15160 346 aaPredicted RBP13.63□□□□□ -0.23
SEC13-204ENST00000397099 MPSTP25325 297 aa13.63□□□□□ -0.23
SEC13-204ENST00000397099 PBLDP30039 288 aaPredicted RBP13.63□□□□□ -0.23
SEC13-204ENST00000397099 NPY2RP49146 381 aa13.63□□□□□ -0.23
SEC13-204ENST00000397099 ACVR1Q04771 509 aa13.63□□□□□ -0.23
SEC13-204ENST00000397099 KRT33BQ14525 404 aa13.63□□□□□ -0.23
SEC13-204ENST00000397099 TGIF1Q15583 401 aa13.63□□□□□ -0.23
SEC13-204ENST00000397099 PCID2Q5JVF3 399 aa13.63□□□□□ -0.23
SEC13-204ENST00000397099 KIAA1614Q5VZ46 1190 aa13.63□□□□□ -0.23
SEC13-204ENST00000397099 CAPRIN2Q6IMN6 1127 aaKnown RBP13.63□□□□□ -0.23
SEC13-204ENST00000397099 FAM83HQ6ZRV2 1179 aaPredicted RBP13.63□□□□□ -0.23
SEC13-204ENST00000397099 CFAP206Q8IYR0 622 aa13.63□□□□□ -0.23
SEC13-204ENST00000397099 KIR3DX1Q9H7L2 352 aa13.63□□□□□ -0.23
SEC13-204ENST00000397099 IMP3Q9NV31 184 aaKnown RBP13.63□□□□□ -0.23
SEC13-204ENST00000397099 BFARQ9NZS9 450 aa13.63□□□□□ -0.23
SEC13-204ENST00000397099 OGFRQ9NZT2 677 aa13.63□□□□□ -0.23
SEC13-204ENST00000397099 ANAPC5Q9UJX4 755 aa13.63□□□□□ -0.23
SEC13-204ENST00000397099 TTC7AQ9ULT0 858 aaPredicted RBP13.63□□□□□ -0.23
SEC13-204ENST00000397099 CFAP46Q8IYW2 2715 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 A8MU76 341 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 SGTAO43765 313 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 KDM1AO60341 852 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 RASSF9O75901 435 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 OR56A5P0C7T3 313 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 TYRP1P17643 537 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 MAP4P27816 1152 aaKnown RBP13.62□□□□□ -0.23
SEC13-204ENST00000397099 CA5AP35218 305 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 RPL22P35268 128 aaKnown RBP13.62□□□□□ -0.23
SEC13-204ENST00000397099 PRAMEP78395 509 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 MAP7Q14244 749 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 TSTD2Q5T7W7 516 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 ARMC6Q6NXE6 501 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 PCSK4Q6UW60 755 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 OOSP2Q86WS3 158 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 RASGEF1CQ8N431 466 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 ZNF843Q8N446 348 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 ACVR1CQ8NER5 493 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 OR4L1Q8NH43 312 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 KLHL6Q8WZ60 621 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 TGM7Q96PF1 710 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 FCRL4Q96PJ5 515 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 WWP1Q9H0M0 922 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 MVB12BQ9H7P6 319 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 OCIAD1Q9NX40 245 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 SMARCAL1Q9NZC9 954 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 FOXJ2Q9P0K8 574 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 SEMA5BQ9P283 1151 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 PSMD13Q9UNM6 376 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 TCAF1Q9Y4C2 921 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 B3GALT1Q9Y5Z6 326 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 SDK2Q58EX2 2172 aa13.62□□□□□ -0.23
SEC13-204ENST00000397099 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.61□□□□□ -0.23
SEC13-204ENST00000397099 CES2O00748 559 aa13.61□□□□□ -0.23
SEC13-204ENST00000397099 PFDN6O15212 129 aa13.61□□□□□ -0.23
SEC13-204ENST00000397099 KIF5CO60282 957 aa13.61□□□□□ -0.23
SEC13-204ENST00000397099 ITGB2P05107 769 aa13.61□□□□□ -0.23
SEC13-204ENST00000397099 TPSB2P20231 275 aa13.61□□□□□ -0.23
SEC13-204ENST00000397099 TTPAP49638 278 aa13.61□□□□□ -0.23
SEC13-204ENST00000397099 BASP1P80723 227 aaKnown RBP13.61□□□□□ -0.23
SEC13-204ENST00000397099 PRKAA1Q13131 559 aa13.61□□□□□ -0.23
SEC13-204ENST00000397099 LY6DQ14210 128 aa13.61□□□□□ -0.23
SEC13-204ENST00000397099 TPSAB1Q15661 275 aa13.61□□□□□ -0.23
SEC13-204ENST00000397099 DBN1Q16643 649 aa13.61□□□□□ -0.23
SEC13-204ENST00000397099 FASTKD1Q53R41 847 aaKnown RBP13.61□□□□□ -0.23
SEC13-204ENST00000397099 CACHD1Q5VU97 1274 aa13.61□□□□□ -0.23
SEC13-204ENST00000397099 IRGCQ6NXR0 463 aa13.61□□□□□ -0.23
SEC13-204ENST00000397099 ZNF605Q86T29 641 aa13.61□□□□□ -0.23
SEC13-204ENST00000397099 ZFAND4Q86XD8 727 aa13.61□□□□□ -0.23
SEC13-204ENST00000397099 MPP5Q8N3R9 675 aa13.61□□□□□ -0.23
SEC13-204ENST00000397099 TAB3Q8N5C8 712 aaPredicted RBP13.61□□□□□ -0.23
SEC13-204ENST00000397099 IL22RA1Q8N6P7 574 aa13.61□□□□□ -0.23
SEC13-204ENST00000397099 OR13J1Q8NGT2 312 aa13.61□□□□□ -0.23
SEC13-204ENST00000397099 HDAC10Q969S8 669 aa13.61□□□□□ -0.23
SEC13-204ENST00000397099 KIAA1143Q96AT1 154 aaPredicted RBP13.61□□□□□ -0.23
SEC13-204ENST00000397099 INSM2Q96T92 566 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms