RNA–Protein interactions for RNA: ENST00000396595.7

LIMCH1-203, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-203ENST00000396595 RLN1P04808 185 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 SPAM1P38567 509 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 DCST1Q5T197 706 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 BEND7Q8N7W2 519 aaPredicted RBP10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 POF1BQ8WVV4 589 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 TCF25Q9BQ70 676 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 NIFKQ9BYG3 293 aaKnown RBP10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 ZNF350Q9GZX5 532 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 MAF1Q9H063 256 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 ABCB9Q9NP78 766 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 NKIRAS2Q9NYR9 191 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 IGSF9Q9P2J2 1179 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 STXBP5LQ9Y2K9 1186 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 NID2Q14112 1375 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 ISPDA4D126 451 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 KLHL33A6NCF5 533 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 E9PAM4 449 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 IL1BP01584 269 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 COL6A1P12109 1028 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 CD52P31358 61 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 TIE1P35590 1138 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 PNLIPRP1P54315 467 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 EVX2Q03828 476 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 CBX2Q14781 532 aaPredicted RBP10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 TARBP2Q15633 366 aaKnown RBP10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 MAP1SQ66K74 1059 aaPredicted RBP10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 TMPRSS11BQ86T26 416 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 LAPTM4BQ86VI4 370 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 PPTC7Q8NI37 304 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 TMCO6Q96DC7 493 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 ZNF717Q9BY31 904 aaPredicted RBP10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 ELL3Q9HB65 397 aaPredicted RBP10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 ACSS2Q9NR19 701 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 FARSBQ9NSD9 589 aaKnown RBP10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 ZDHHC18Q9NUE0 388 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 TMEM5Q9Y2B1 443 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 GPSM3Q9Y4H4 160 aa10.14□□□□□ -0.79
LIMCH1-203ENST00000396595 AQP12BA6NM10 295 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 IRF6O14896 467 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 SLC7A4O43246 635 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 PRKACBP22694 351 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 ARL2P36404 184 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 SLC18A1P54219 525 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 WDR4P57081 412 aaKnown RBP10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 CNPY1Q3B7I2 92 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 PAOXQ6QHF9 649 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 RTL4Q6ZR62 310 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 AQP12AQ8IXF9 295 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 SLCO2A1Q92959 643 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 SLC38A4Q969I6 547 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 ERLEC1Q96DZ1 483 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 HSD3B7Q9H2F3 369 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 UCKL1Q9NWZ5 548 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 SOHLH2Q9NX45 425 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 TLL2Q9Y6L7 1015 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 SERPINA3P01011 423 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 YES1P07947 543 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 HTR1BP28222 390 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 SLC7A1P30825 629 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 SLC5A3P53794 718 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 C2orf80Q0P641 193 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 ZNF267Q14586 743 aaPredicted RBP10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 TEAD4Q15561 434 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 SSX2Q16385 188 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 DNAJB8Q8NHS0 232 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 FERD3LQ96RJ6 166 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 GPR20Q99678 358 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 CORO1BQ9BR76 489 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 NDUFAF4Q9P032 175 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 MST1RQ04912 1400 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 ABHD14A-ACY1A0A1B0GW23 586 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 PIP5K1BO14986 540 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 ANXA4P09525 319 aaPredicted RBP10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 RAP2AP10114 183 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 HSD3B2P26439 372 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 AP3S2P59780 193 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 PEX6Q13608 980 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 GTF2H2Q13888 395 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 ZBTB6Q15916 424 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 POM121L1PQ3SYA9 428 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 GTF2H2CQ6P1K8 395 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 SRFBP1Q8NEF9 429 aaKnown RBP10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 XAGE5Q8WWM1 108 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 DNAJB9Q9UBS3 223 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 GRIN2DO15399 1336 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 M0R036 132 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 PER2O15055 1255 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 ATG13O75143 517 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 LDOC1O95751 146 aaPredicted RBP10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 PGRP06401 933 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 NMBRP28336 390 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 PBX3P40426 434 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 HSPA7P48741 367 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 ACADVLP49748 655 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 OR2B6P58173 313 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 DSC2Q02487 901 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 TAF10Q12962 218 aa10.13□□□□□ -0.79
LIMCH1-203ENST00000396595 PRKD1Q15139 912 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms