RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 CD40LGP29965 261 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 AFF1P51825 1210 aaKnown RBP9.7□□□□□ -0.86
TRIM39-203ENST00000396547 NKX3-2P78367 333 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 ILF2Q12905 390 aaKnown RBP9.7□□□□□ -0.86
TRIM39-203ENST00000396547 LCP2Q13094 533 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 RCAN2Q14206 197 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 GRB14Q14449 540 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 C18orf21Q32NC0 220 aaPredicted RBP9.7□□□□□ -0.86
TRIM39-203ENST00000396547 KANK2Q63ZY3 851 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 LAIR2Q6ISS4 152 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 ZNF467Q7Z7K2 595 aaPredicted RBP9.7□□□□□ -0.86
TRIM39-203ENST00000396547 OR6Q1Q8NGQ2 317 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 FAR1Q8WVX9 515 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 SENP8Q96LD8 212 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 SLC9A7Q96T83 725 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 PRKD2Q9BZL6 878 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 TRIT1Q9H3H1 467 aaKnown RBP9.7□□□□□ -0.86
TRIM39-203ENST00000396547 ZFP14Q9HCL3 533 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 AIG1Q9NVV5 245 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 IL37Q9NZH6 218 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 EIF2B4Q9UI10 523 aaKnown RBP9.7□□□□□ -0.86
TRIM39-203ENST00000396547 VPS4AQ9UN37 437 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 POLR3HQ9Y535 204 aaPredicted RBP9.7□□□□□ -0.86
TRIM39-203ENST00000396547 NRCAMQ92823 1304 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.7□□□□□ -0.86
TRIM39-203ENST00000396547 CCDC162PA2VCL2 907 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 TNPO2O14787 897 aaKnown RBP9.7□□□□□ -0.86
TRIM39-203ENST00000396547 FFAR3O14843 346 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 CD3EAPO15446 510 aaKnown RBP9.7□□□□□ -0.86
TRIM39-203ENST00000396547 GPR42O15529 346 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 ECI2O75521 394 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 ZNF682O95780 498 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 MT-ND2P03891 347 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 DNTTP04053 509 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 CNPP09543 421 aaKnown RBP9.7□□□□□ -0.86
TRIM39-203ENST00000396547 HTR1EP28566 365 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 ADRA1AP35348 466 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 ALDH7A1P49419 539 aaKnown RBP9.7□□□□□ -0.86
TRIM39-203ENST00000396547 HTR6P50406 440 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 MRPS15P82914 257 aaKnown RBP9.7□□□□□ -0.86
TRIM39-203ENST00000396547 EMX2Q04743 252 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 EPS8Q12929 822 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 CDK5R2Q13319 367 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 SEMA3AQ14563 771 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 GTDC1Q4AE62 458 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 C6orf136Q5SQH8 315 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 TWF2Q6IBS0 349 aaKnown RBP9.7□□□□□ -0.86
TRIM39-203ENST00000396547 GALNT10Q86SR1 603 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 RIMKLAQ8IXN7 391 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 MFSD4AQ8N468 514 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 ARRDC4Q8NCT1 418 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 OR52B6Q8NGF0 335 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 METTL6Q8TCB7 284 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 PROKR1Q8TCW9 393 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 CD99L2Q8TCZ2 262 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 LGALS12Q96DT0 336 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 CNDP2Q96KP4 475 aaKnown RBP9.7□□□□□ -0.86
TRIM39-203ENST00000396547 SMIM14Q96QK8 99 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 CGREF1Q99674 301 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 BARD1Q99728 777 aaKnown RBP9.7□□□□□ -0.86
TRIM39-203ENST00000396547 NFKBIZQ9BYH8 718 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 RNF38Q9H0F5 515 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 MAGEL2Q9UJ55 1249 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 ASB1Q9Y576 335 aa9.7□□□□□ -0.86
TRIM39-203ENST00000396547 A0A0U1RQS6 177 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 TAF4O00268 1085 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 FAM20BO75063 409 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 CCNKO75909 580 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 RECQL5O94762 991 aaPredicted RBP9.69□□□□□ -0.86
TRIM39-203ENST00000396547 MATN4O95460 622 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 F9P00740 461 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 KRT8P05787 483 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 SLC2A4P14672 509 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 CD36P16671 472 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 HCAR3P49019 387 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 MADCAM1Q13477 382 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 CRY1Q16526 586 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 HIST2H2ACQ16777 129 aaPredicted RBP9.69□□□□□ -0.86
TRIM39-203ENST00000396547 AHSA2Q719I0 299 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 GIPC2Q8TF65 315 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 CTRCQ99895 268 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 NEK6Q9HC98 313 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 MAGEE1Q9HCI5 957 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 SLC52A3Q9NQ40 469 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 VAPAQ9P0L0 249 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 FBXO10Q9UK96 956 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 GUCY1B2O75343 617 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 EEDO75530 441 aaKnown RBP9.69□□□□□ -0.86
TRIM39-203ENST00000396547 HMBSP08397 361 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 DNAJB1P25685 340 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 DNAJB2P25686 324 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 PGFP49763 221 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 ST13P50502 369 aaKnown RBP9.69□□□□□ -0.86
TRIM39-203ENST00000396547 ISL1P61371 349 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 CYP4F2P78329 520 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 ARHGAP1Q07960 439 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 CYP4F3Q08477 520 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 GALNT1Q10472 559 aaPredicted RBP9.69□□□□□ -0.86
TRIM39-203ENST00000396547 PTGR1Q14914 329 aa9.69□□□□□ -0.86
TRIM39-203ENST00000396547 SOWAHCQ53LP3 525 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms